6 Commits

Author	SHA1	Message	Date
Tobias C. Berner	707c6bf295	Change cmake default behaviour to outsource. ... Ports that build out of source now simply can use "USES=cmake" instead of "USES=cmake:outsource". Ports that fail to build out of source now need to specify "USES=cmake:insource". I tried to only set insource where explictely needed. PR: 232038 Exp-run by: antoine	2018-12-25 20:25:39 +00:00
Gerald Pfeifer	a9f015d155	Bump PORTREVISION for ports depending on the canonical version of GCC ... defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t GCC 8.2 under most circumstances. This includes ports - with USE_GCC=yes or USE_GCC=any, - with USES=fortran, - using Mk/bsd.octave.mk which in turn features USES=fortran, and - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang, c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib plus, as a double check, everything INDEX-11 showed depending on lang/gcc7. PR: 231590	2018-12-12 01:35:33 +00:00
Joseph Mingrone	6c672c455f	biology/hyphy: Update to version 2.3.14.16 ... This pulls in fixes after the 2.3.14 release. Upstream changes for version 2.3.14: https://github.com/veg/hyphy/releases/tag/2.3.14 Subsequent fixes: https://github.com/veg/hyphy/commit/1ecac31 https://github.com/veg/hyphy/commit/bec6833 https://github.com/veg/hyphy/commit/9847438 https://github.com/veg/hyphy/commit/02dcedd https://github.com/veg/hyphy/commit/8f44d3c https://github.com/veg/hyphy/commit/5297c30 https://github.com/veg/hyphy/commit/3d88d3e	2018-10-20 12:21:15 +00:00
Joseph Mingrone	f6900327d3	biology/hyphy: Update to version 2.3.13	2018-05-22 22:55:18 +00:00
Joseph Mingrone	b19510413c	biology/hyphy: Bump PORTREVISION after upstream rerolled release ... Also, remove patch that upstream incorporated in new tarball. Upstream issue: https://github.com/veg/hyphy/issues/796	2018-05-14 16:52:40 +00:00
Joseph Mingrone	e59e3784bd	New port, biology/hyphy: Hypothesis testing using Phylogenies ... WWW: http://www.hyphy.org/	2018-05-11 00:05:16 +00:00