mirror/freebsd-ports
1
0
Fork 0
mirror of https://git.FreeBSD.org/ports.git synced 2025-01-13 07:34:50 +00:00
Code Issues Releases Activity
03bf7f7434
freebsd-ports/science
History
Boris Samorodov 93ab95bca7 science/pulseview: Update to version 0.4.1 
This is quite a major release with loads of new features and bugfixes.

Major new features and improvements:

* One of the most-often requested features has been implemented:
  Snapping cursors to signal edges. The current implementation snaps
  to edges of a specific channel if the mouse cursor is inside that
  channel, and it snaps to edges of any channel otherwise. When moving
  both cursors at the same time, only the left cursor will snap, while
  the overall distance between the cursors stays the same (which
  allows for easy measurements/comparisons).
* There's a bunch of new command-line switches such as --driver or
  --dont-scan, as well as option support for --input-file, see manpage
  for details. You can now also load multiple files at once when
  starting Pulseview, e.g. via "pulseview *.sr" or the like.
* There's support for converting analog channels to digital/logic
  channels now, either via a threshold or a schmitt-trigger method.
  This allows feeding the converted channels to protocol decoders,
  which was not possible before.
* PulseView now has theme support and ships with the current (default)
  "light" theme and two new "dark"-style themes which some people
  might prefer.
* There have been a bunch of UI improvements, such as showing a tooltip
  for the cursor measurement values if needed, logic high areas are
  now colored differently for clearer visualization, there's a
  convenience mouse hover vertical line now, you can enable/disable
  many channels more easily via buttons, and lots more.
* Protocol decoder annotations can now be exported in a user-configurable
  format, either all annotations, or only those of a certain annotation
  row, or only those between the cursors, etc.
* Protocol decoder channel name auto-mapping has been improved, so
  it'll probably match your desired channel setup more often without
  requiring manual channel assignment.

Additionally, there have been quite a few performance and memory
usage improvements. E.g. files should load quite a bit faster now,
some painting operations are faster as well, various memory leaks
and inefficiencies have been fixed, and so on.

Of course there have also been a huge amount of fixes for some
rather annoying bugs (e.g. UI lag when changing decoder options/channels)
and also many smaller ones. A bunch of crash conditions on various
OSes have also been fixed.

See the NEWS file for a much more detailed list of changes, or
browse the git history for even more details.
2018-11-03 13:53:29 +00:00
..
2d-rewriter
abinit Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
afni Add DOCS options to ports that should have one. 2018-09-10 13:14:50 +00:00
aircraft-datcom Add DOCS options to ports that should have one. 2018-09-10 13:14:50 +00:00
ALPSCore Remove compatibility code for FreeBSD < 11.2 from all ports. 2018-11-02 13:32:34 +00:00
antioch Upgrade these ports to USES=compiler:c++11-lang to fix build on gcc-based 2018-09-18 09:28:34 +00:00
atom science/libxc: Update 3.0.0 -> 4.2.3 2018-10-20 23:29:28 +00:00
atompaw science/atompaw: Update 4.1.0.3 -> 4.1.0.4 2018-09-20 15:00:46 +00:00
avogadro science/avogadro: Add CONFLICTS statement 2018-10-24 06:03:32 +00:00
avogadro2 science/avogadrolibs: Update 1.91.0 -> 1.91.0-107 2018-10-18 22:31:26 +00:00
avogadrolibs science/avogadrolibs: Update 1.91.0 -> 1.91.0-107 2018-10-18 22:31:26 +00:00
bagel science/bagel: Update 1.1.2-21 -> 1.2.0 2018-10-28 16:02:08 +00:00
bddsolve Fix build on gcc-based archs by updating USES. 2018-09-22 05:30:31 +00:00
bft - Fix LICENSE 2017-12-06 09:00:23 +00:00
bodr
brian Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
buddy
cdcl Add EXAMPLES options to ports that should have one. 2018-09-10 13:15:47 +00:00
cdf Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
cdo Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
cgnslib science/cgnslib: Update to 3.3.1 and modernize 2018-10-18 00:27:01 +00:00
cgribex
checkmol - Migrate Mk/bsd.fpc.mk to Mk/Uses/fpc.mk 2018-04-05 04:52:36 +00:00
chemical-mime-data
chemps2 science/chemps2: Update 1.8.8 -> 1.8.9 2018-10-30 06:00:05 +00:00
chemtool science/chemtool: fix build with GCC-based architectures 2018-10-20 16:21:13 +00:00
chemtool-devel Return maho@'s ports to the pool after his commit bit expired. 2018-03-11 11:20:43 +00:00
chrono Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
clhep Remove compatibility code for FreeBSD < 11.2 from all ports. 2018-11-02 13:32:34 +00:00
clipper science/clipper: Update 2.1.20180526 -> 2.1.20180802 2018-09-27 03:50:55 +00:00
colt Mark as broken on powerpc64. 2018-06-08 02:35:17 +00:00
coordgenlibs New port: science/coordgenlibs: Schrodinger-developed 2D coordinate generation 2018-10-25 07:36:58 +00:00
coot Cleanup plists 2018-10-01 09:36:38 +00:00
cp2k science/cp2k: Change from net/mpich2 -> net/mpich 2018-09-23 00:25:19 +00:00
crf++ science/crf++: Fix build with Clang 6 2018-09-01 10:29:11 +00:00
dalton science/dalton: Fix license. 2018-09-02 07:53:31 +00:00
datawarrior New port: science/datawarrior: Chemistry-aware multi-purpose data visualization and analysis program 2018-08-27 06:15:56 +00:00
dcl Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
devisor
dft_tools Mark BROKEN: wrong LIB_DEPENDS 2018-09-27 05:26:32 +00:00
dftbplus science/dftbplus science/mbdyn science/octopus: Change from math/arpack to math/arpack-ng 2018-10-04 21:10:42 +00:00
dkh Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
dlib-cpp Set MAINTAINER of mine ports to @FreeBSD.org email. 2018-08-09 14:24:37 +00:00
dlpoly-classic Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
eccodes Update MASTER_SITES and WWW 2018-09-06 18:23:25 +00:00
ecs Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
elk New port: science/elk: All-electron full-potential linearised augmented-planewave code 2018-09-23 08:43:32 +00:00
epte
erd Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
erkale New port: science/erkale: Quantum chemistry program to solve the electronic structure of atoms 2018-10-21 17:56:11 +00:00
fastcap
fasthenry
fisicalab Update Objective-C LLVM version to 6.0. 2018-09-26 15:23:37 +00:00
fleur Change 20 ports from net/mpich2 to net/mpich 2018-09-22 16:36:38 +00:00
fsom science/fsom: Fix build on GCC-based architectures 2018-09-30 21:41:44 +00:00
fvcom Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
fvcom-mpi Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
fvm science/fvm: Change from net/mpich2 to net/mpich 2018-10-02 21:38:06 +00:00
gabedit Change x11/xorgproto to become a build dep 2018-09-11 18:34:27 +00:00
gamess-us science/gamess-us: Cosmetic change: internal version number change to 00 for convenence because it is a default 2018-10-15 06:12:03 +00:00
gchemutils science/gchemutils: mark BROKEN if XUL option is chosen 2018-06-23 10:41:05 +00:00
gdma Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
getdp - Update to 3.0.3. 2018-10-24 14:36:09 +00:00
ghemical science/libint: Update 1.1.6 -> 1.2.1 2018-08-27 22:56:43 +00:00
ghmm
gnudatalanguage science/gnudatalanguage: Change from net/mpich2 to net/mpich 2018-10-02 21:54:14 +00:00
gpaw-setups New port: science/gpaw-setups: Setups (data files) for py-gpaw, the DFT quantum chemistry software 2018-10-30 04:36:22 +00:00
gramps science/gramps: Tidy up the USE_PYTHON settings 2018-02-26 15:06:56 +00:00
grib_api Update to 1.27.0 2018-09-06 18:23:31 +00:00
gromacs Change 20 ports from net/mpich2 to net/mpich 2018-09-22 16:36:38 +00:00
gsmc
gtamsanalyzer Update Objective-C LLVM version to 6.0. 2018-09-26 15:23:37 +00:00
gwyddion Update ilmbase and openexr to 2.3.0, rename OpenEXR to openexr. 2018-09-22 10:15:22 +00:00
h5utils Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
harminv Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
hdf Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
hdf5 Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
hdf5-18 Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
hypre science/hypre: Update 2.15.0 -> 2.15.1 2018-10-20 15:47:07 +00:00
iboview Change x11/xorgproto to become a build dep 2018-09-11 18:34:27 +00:00
InsightToolkit Fix typo in previous commit. 2018-10-29 09:40:56 +00:00
isaac-cfd Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
jdftx science/libxc: Update 3.0.0 -> 4.2.3 2018-10-20 23:29:28 +00:00
jstrack Add DOCS options to ports that should have one. 2018-09-10 13:14:50 +00:00
kalzium Update KDE Applications to 18.08.2 2018-10-11 20:23:50 +00:00
kalzium-kde4 science/kalzium-kde4: Fix build 2018-10-28 02:37:33 +00:00
kst2 Fix build with Qt 5.11 2018-08-31 08:57:17 +00:00
lammps New port: science/lammps: Classical molecular dynamics code with a focus on materials modeling 2018-09-06 06:31:27 +00:00
lamprop science/lamprop: Unbreak by fixing the python interpreter in the shebang 2018-03-13 08:27:23 +00:00
latte New port: science/latte: Quantum chemistry: Density functional tight binding molecular dynamics 2018-10-31 23:05:37 +00:00
libaec Convert to USE_GITLAB 2018-03-14 18:11:33 +00:00
libccp4 Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
libcint science/libcint: Update 3.0.12 -> 3.0.13 2018-06-15 08:48:31 +00:00
libctl Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
libefp science/libefp: Update to 1.5.0 2017-12-23 18:19:11 +00:00
libgeodecomp devel/boost-*: update to 1.68.0 2018-08-09 06:58:30 +00:00
libghemical science/libint: Update 1.1.6 -> 1.2.1 2018-08-27 22:56:43 +00:00
libgridxc science/libxc: Update 3.0.0 -> 4.2.3 2018-10-20 23:29:28 +00:00
libint science/libint: PORTSCOUT=limit 2018-08-30 17:24:44 +00:00
libint2 Remove compatibility code for FreeBSD < 11.2 from all ports. 2018-11-02 13:32:34 +00:00
libkml devel/google{test,mock}: update to 1.8.1 2018-08-31 20:14:40 +00:00
liblinear Reset MAINTAINER on ports maintained by amutu@amutu.com 2018-06-22 08:04:38 +00:00
libmsym New port: science/libmsym: Molecular point group symmetry library 2018-10-16 22:58:17 +00:00
liboglappth Return maho@'s ports to the pool after his commit bit expired. 2018-03-11 11:20:43 +00:00
libquantum
libssm science/libssm: Fix build: put spaces between quotedstrings and defined values in C 2018-07-13 04:58:15 +00:00
libsvm - Update pkg-descr 2018-10-13 14:26:24 +00:00
libsvm-python
libxc science/libxc: Update 3.0.0 -> 4.2.3 2018-10-20 23:29:28 +00:00
linsmith Deprecate some GNOME 2 applications 2018-10-07 20:25:16 +00:00
lm Change 20 ports from net/mpich2 to net/mpich 2018-09-22 16:36:38 +00:00
luscus Sscience/luscus: Update 0.8.5 -> 0.8.6 2018-10-18 07:30:25 +00:00
madness science/libxc: Update 3.0.0 -> 4.2.3 2018-10-20 23:29:28 +00:00
maeparser New port: science/maeparser: Parser for Schrodinger Maestro files 2018-10-25 07:24:36 +00:00
massxpert Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
mbdyn science/dftbplus science/mbdyn science/octopus: Change from math/arpack to math/arpack-ng 2018-10-04 21:10:42 +00:00
mcstas science/mcstas: switch back to PORTVERSION 2017-12-06 16:18:35 +00:00
mcstas-comps
mcxtrace New port: science/mcxtrace: Monte Carlo X-ray tracing package 2017-12-05 19:15:49 +00:00
mcxtrace-comps science/mcxtrace-comps: remove comment line 2018-05-07 19:43:04 +00:00
mdynamix Change 20 ports from net/mpich2 to net/mpich 2018-09-22 16:36:38 +00:00
medit
meep Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
mei - Switch to new test framework 2018-04-26 08:33:48 +00:00
metaf2xml Fix whitespace issues (mixed tab/spaces, alignment) in a few ports. 2017-10-31 14:51:53 +00:00
metaphysicl science/metaphysicl: Update 0.3.0.1 -> 0.3.1 2018-10-18 21:28:46 +00:00
minc2 Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
mmdb2 science/mmdb2: Update 2.0.12 -> 2.0.16 2018-07-07 23:40:51 +00:00
mmtf New port: science/mmtf: C++ implementation of the MMTF API, decoder and encoder 2018-10-18 21:21:17 +00:00
mol2ps - Migrate Mk/bsd.fpc.mk to Mk/Uses/fpc.mk 2018-04-05 04:52:36 +00:00
molgif New port: science/molgif: Tool to create GIF animations of molecules 2018-10-07 21:54:19 +00:00
molsketch New port: science/molsketch: 2D molecule editor 2018-10-24 05:36:11 +00:00
MOOSE-neural-simulator Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
mpb Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
mpqc science/mpqc: Add -lmpich to LDFLAGS: this fixes science/libghemical build 2018-09-07 02:23:54 +00:00
msms science/msms: Add back NO_WRKSUBDIR 2018-09-10 07:09:49 +00:00
multiwfn Fix typo in version. 2018-08-27 13:51:29 +00:00
namd science/namd: Remove RESTRICTED because LICENSE_PERMS is restrictive 2018-09-10 06:59:36 +00:00
ncs Mark BROKEN: conflicting dependencies 2018-10-06 21:10:46 +00:00
netcdf Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
netcdf-cxx Update WWW 2017-12-11 10:37:19 +00:00
netcdf-fortran Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
nifticlib Multiple ports: 2018-01-31 01:07:07 +00:00
nwchem science/nwchem: Update 6.8.1-release-94 -> 6.8.1-release-144 2018-10-09 01:28:07 +00:00
octopus science/libxc: Update 3.0.0 -> 4.2.3 2018-10-20 23:29:28 +00:00
openbabel science/openbabel: Take maintainership; Add the GUI option using wxWidgets-3.0 2018-06-12 07:39:34 +00:00
openkim Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
openmx Change 20 ports from net/mpich2 to net/mpich 2018-09-22 16:36:38 +00:00
openstructure Change x11/xorgproto to become a build dep 2018-09-11 18:34:27 +00:00
p5-Algorithm-SVMLight Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-3DBuilder Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-Bond-Find - Add LICENSE 2018-10-09 09:08:39 +00:00
p5-Chemistry-Canonicalize - Add LICENSE 2018-10-05 09:08:36 +00:00
p5-Chemistry-Elements Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-File-MDLMol Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-File-Mopac Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-File-PDB Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except 2018-10-06 13:06:42 +00:00
p5-Chemistry-File-SLN Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-File-SMARTS Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-File-SMILES Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-File-VRML Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-File-XYZ Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-FormulaPattern Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-InternalCoords Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-Isotope Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-MacroMol Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except 2018-10-06 13:06:42 +00:00
p5-Chemistry-MidasPattern Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-Mok Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-Mol Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except 2018-10-06 13:06:42 +00:00
p5-Chemistry-Pattern Update WWW 2018-05-27 20:15:16 +00:00
p5-Chemistry-Reaction Update WWW 2018-07-29 19:26:49 +00:00
p5-Chemistry-Ring Update WWW 2018-05-27 20:15:16 +00:00
p5-Geo-BUFR Remove MASTER_SITE_SUBDIR 2018-09-10 20:27:04 +00:00
p5-Geo-Coordinates-Converter Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except 2018-10-06 13:06:42 +00:00
p5-Geo-Coordinates-Converter-iArea Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except 2018-10-06 13:06:42 +00:00
p5-Geo-ReadGRIB Update WWW 2018-05-27 20:15:16 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.110 2018-10-10 01:38:11 +00:00
p5-Mcstas-Tools Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
p5-PerlMol Update WWW 2018-05-27 20:15:16 +00:00
p5-Physics-Unit Update WWW 2018-05-27 20:15:16 +00:00
paje Update Objective-C LLVM version to 6.0. 2018-09-26 15:23:37 +00:00
paraview Cleanup plist 2018-10-01 06:30:37 +00:00
pcmsolver Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
PETSc science/PETSc: Update 3.10.1 -> 3.10.2 2018-10-20 16:08:58 +00:00
pnetcdf Change from MPICH2 to MPICH option 2018-09-24 11:14:24 +00:00
psychopy Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
pulseview science/pulseview: Update to version 0.4.1 2018-11-03 13:53:29 +00:00
py-abipy science/py-abipy: Update 0.5.0 -> 0.6.0 2018-08-24 18:31:51 +00:00
py-ase Never use ${FLAVOR} directly in dependencies, FLAVOR is not transitive. 2018-09-14 12:19:48 +00:00
py-avogadrolibs New port: science/py-avogadrolibs: Python bindings for Avogadro2 chemistry libraries 2018-10-21 17:52:35 +00:00
py-cdo Update to 1.4.0 2018-09-20 19:27:39 +00:00
py-chempy science/py-chempy: Update 0.7.5 -> 0.7.6 2018-10-29 04:31:09 +00:00
py-coards Switch all pypi.python.org WWWs to a new PyPi home pypi.org where 2018-04-25 16:42:37 +00:00
py-DendroPy Fix packaging with python 3.x 2018-10-12 14:58:58 +00:00
py-dlib Set MAINTAINER of mine ports to @FreeBSD.org email. 2018-08-09 14:24:37 +00:00
py-gpaw science/py-gpaw: Add pkg-message; Add LICENSE_FILE; Change /usr/local to LOCALBASE 2018-10-30 04:38:26 +00:00
py-gsd science/py-gsd: Update 1.5.3 -> 1.5.4 2018-10-06 04:09:31 +00:00
py-h5py Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
py-hcluster Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-kinematics Add py-kinematics 0.0.7 2018-06-24 20:05:42 +00:00
py-MDAnalysis science/py-MDAnalysis: Update 0.18.0 -> 0.19.0 2018-10-12 01:15:42 +00:00
py-MDAnalysisTests science/py-MDAnalysisTests: Update 0.18.0 -> 0.19.0 2018-10-12 01:16:48 +00:00
py-mdp Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-mlpy Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
py-mmtf-python Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-molmod New port: science/py-molmod: Collection of molecular modelling tools for python 2018-09-14 03:10:59 +00:00
py-netCDF4 Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
py-obspy Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
py-OpenFermion science/py-OpenFermion: Update 0.7 -> 0.8 2018-07-17 17:41:26 +00:00
py-openpiv Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-paida Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-phono3py New port: science/py-phono3py: Software to calculate phonon-phonon interaction and related properties 2018-09-14 05:37:12 +00:00
py-phonopy science/py-phonopy: Fix tests 2018-10-17 07:04:50 +00:00
py-pupynere Switch all pypi.python.org WWWs to a new PyPi home pypi.org where 2018-04-25 16:42:37 +00:00
py-pyaixi Switch all pypi.python.org WWWs to a new PyPi home pypi.org where 2018-04-25 16:42:37 +00:00
py-pydicom - Update to 1.2.0 2018-10-08 12:03:51 +00:00
py-PyFR science/py-PyFR: Update 1.7.6 -> 1.8.0 2018-10-17 07:27:27 +00:00
py-pymatgen science/py-pymatgen: Update 2018.8.10 -> 2018.9.1 2018-09-17 20:29:11 +00:00
py-pymol science/py-pymol: Update 2.1.0 -> 2.2.0 2018-09-17 20:48:45 +00:00
py-pyosf Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-PyQuante Mark as broken on aarch64. 2018-06-25 04:54:53 +00:00
py-pysal Update to 1.14.4 2018-07-29 19:17:58 +00:00
py-pyteomics Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-pyteomics.biolccc Switch all pypi.python.org WWWs to a new PyPi home pypi.org where 2018-04-25 16:42:37 +00:00
py-qspin Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
py-quantities science/py-quantities: Update 0.12.1 -> 0.12.2 2018-07-04 19:21:46 +00:00
py-rmf science/py-rmf: Correct version 2018-08-30 17:34:27 +00:00
py-ScientificPython science/py-ScientificPython: Change WWW URL; Change to CHEESESHOP 2018-06-30 16:49:08 +00:00
py-scikit-fuzzy science/py-scikit-fuzzy: Update 0.3.1 -> 0.4.0 2018-10-19 04:43:52 +00:00
py-scikit-learn - Add LICENSE 2018-10-30 09:00:15 +00:00
py-scikit-sparse Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
py-scimath Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-scipy Update MASTER_SITES 2018-10-06 09:27:12 +00:00
py-scoria Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-SimpleSpectral New port: science/py-SimpleSpectral: Simplified scipy.signal.spectral module with only pyFFTW support 2018-06-18 02:34:02 +00:00
py-spglib science/py-spglib: Update 1.10.4.1 -> 1.10.4.11 2018-09-19 18:35:55 +00:00
py-veusz Remove all := from BUILD_DEPENDS, here are never needed. 2018-07-09 08:40:17 +00:00
py-ws2300 science/py-ws2300: Unbroke the port. 2018-02-26 04:16:14 +00:00
pybrain Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
pycdf Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
pynn Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
qbox Change 20 ports from net/mpich2 to net/mpich 2018-09-22 16:36:38 +00:00
qcl
qmcpack Remove compatibility code for FreeBSD < 11.2 from all ports. 2018-11-02 13:32:34 +00:00
qtresistors Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
quantum-espresso Change 20 ports from net/mpich2 to net/mpich 2018-09-22 16:36:38 +00:00
qwalk science/qwalk: Add PORTSCOUT=limit 2018-08-30 17:50:38 +00:00
R-cran-AMORE Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-bayesm Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-cmprsk Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-DCluster Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-e1071 - Update to 1.7-0 2018-08-10 10:00:35 +00:00
R-cran-eco Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-Epi - Update to 2.32 2018-08-27 02:22:54 +00:00
R-cran-epicalc Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-etm - Update to 1.0.4 2018-08-20 09:30:52 +00:00
R-cran-fastICA Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-kernlab - Update to 0.9-27 2018-08-13 08:44:29 +00:00
R-cran-snow - Update to 0.4-3 2018-09-18 06:51:54 +00:00
R-cran-som Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
R-cran-udunits2 Bump PORTREVISIONs of all users of math/mpc that we just updated to 2018-03-10 17:46:04 +00:00
rdkit science/rdkit: Update 2018_03_4 -> 2018_09_1 2018-10-25 07:00:51 +00:00
rmf Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
rubygem-ai4r
rubygem-cdo Update to 1.4.0 2018-09-20 19:28:05 +00:00
rubygem-rgeo Update to 1.1.2 2018-10-11 23:45:49 +00:00
rubygem-rgeo-geojson Add rubygem-rgeo-geojson 2.0.0 2018-04-07 16:32:45 +00:00
rubygem-rgeo-proj4 Add rubygem-rgeo-proj4 1.0.0 2018-04-07 16:33:14 +00:00
rubygem-rgeo-shapefile Add rubygem-rgeo-shapefile 1.0.0 2018-04-07 16:33:40 +00:00
rubygem-ruby-dcl science/rubygem-ruby-dcl: update to 1.8.1 2018-07-10 15:12:47 +00:00
rubygem-ruby-netcdf Update to 4.5.0 2017-10-21 20:18:16 +00:00
siesta New port: science/siesta: Program to perform efficient electronic structure calculations 2018-09-03 17:51:32 +00:00
sigrok-cli science/sigrok-cli: Update to version 0.7.1 2018-11-03 12:53:26 +00:00
sigrok-firmware
sigrok-firmware-fx2lafw Add DOCS options to ports that should have one. 2018-09-10 13:14:50 +00:00
sigrok-firmware-utils Add DOCS options to ports that should have one. 2018-09-10 13:14:50 +00:00
silo Update science/hdf5 to 1.10.2 2018-09-05 22:05:23 +00:00
simint science/simint: Update 0.7 -> 0.8 2018-10-11 03:21:01 +00:00
simlib Remove compatibility code for FreeBSD < 11.2 from all ports. 2018-11-02 13:32:34 +00:00
simsmith
spglib science/spglib: Update 1.10.3 -> 1.10.4 2018-08-08 23:10:44 +00:00
step Fix build with GCC-based architectures for various kde@ ports. 2018-10-27 11:50:58 +00:00
step-kde4 Deprecate KDE4 software in categories graphics-textproc. 2018-08-30 18:23:24 +00:00
svmlight
szip Auto-accept SZIP license, otherwise hundreds of ports are skipped 2018-06-06 12:13:19 +00:00
teem New port: science/teem: Libraries for representing, processing and visualizing scientific data 2018-09-02 06:43:29 +00:00
tfel devel/boost-*: update to 1.68.0 2018-08-09 06:58:30 +00:00
tinker biology/tinker: Update 7.1.3 -> 8.4.4; Move to science/ 2018-10-07 00:19:22 +00:00
triqs Remove compatibility code for FreeBSD < 11.2 from all ports. 2018-11-02 13:32:34 +00:00
udunits Remove LICENSE_FILE from PORTDOCS 2018-08-31 14:41:13 +00:00
v_sim Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
vmd science/vmd: Remove RESTRICTED: not required 2018-09-10 07:06:17 +00:00
voro++ Multiple ports: 2018-01-31 01:07:07 +00:00
wannier90 New port: science/wannier90: Maximally-localized Wannier functions (MLWFs) and Wannier90 2018-09-03 04:09:00 +00:00
wxmacmolplt New port: science/wxmacmolplt: Graphical user interface principally for the GAMESS program 2018-10-14 23:15:09 +00:00
xcrysden Bump PORTREVISION for ports depending on the canonical version of GCC 2018-07-29 22:18:44 +00:00
xdrawchem Change x11/xorgproto to become a build dep 2018-09-11 18:34:27 +00:00
xfce4-equake-plugin
xmakemol
Makefile New port: science/latte: Quantum chemistry: Density functional tight binding molecular dynamics 2018-10-31 23:05:37 +00:00