..
ariadne
artemis
Support stage
2014-01-20 23:06:48 +00:00
avida
babel
Support stage
2014-01-15 22:44:13 +00:00
biococoa
biojava
- add stage support
2014-06-01 10:37:22 +00:00
blast
Multiple ports: reset maintainers
2014-05-26 02:33:38 +00:00
blat
Convert b* to USES=zip
2014-03-07 15:52:40 +00:00
boinc-simap
Drop maintainership BOINC ports, old machine running them gave up.
2014-02-04 17:54:29 +00:00
chemeq
Stage support
2014-01-18 15:55:42 +00:00
clustalw
Multiple ports: reset maintainers
2014-05-26 02:33:38 +00:00
consed
Remove indefinite articles and trailing periods from COMMENT, plus
2014-06-09 11:21:52 +00:00
crux
Update the default version of GCC used in the Ports Collection from
2014-03-10 20:55:20 +00:00
embassy
biology/embassy: specify post-extraction with ${TAR}
2014-05-29 10:47:58 +00:00
emboss
Remove indefinite articles and trailing periods from COMMENT, plus
2014-06-09 11:21:52 +00:00
fasta
- Add staging support
2014-03-24 09:01:39 +00:00
fasta3
biology/fasta3: Checked new distfile and regenerated distinfo to unbreak
2014-03-02 10:58:50 +00:00
fastdnaml
Support staging
2014-02-16 11:32:43 +00:00
fluctuate
Support staging
2014-02-16 11:35:00 +00:00
garlic
- Convert USE_GMAKE to USES
2014-03-13 07:41:34 +00:00
gff2ps
Add staging support
2014-03-23 17:43:41 +00:00
gmap
gperiodic
Add staging support
2014-03-23 18:09:23 +00:00
grappa
hmmer
iolib
- I forgot to svn add a new patch
2014-05-31 18:03:08 +00:00
jalview
Fix properties on pkg-plist
2014-01-21 23:18:05 +00:00
lagan
lamarc
libsbml
- Update to 5.10.0
2014-05-13 07:04:17 +00:00
linux-foldingathome
mafft
Add DOCS and EXAMPLE options to biology/mafft
2014-05-31 04:18:18 +00:00
mapm3
- Fix build with clang
2014-01-12 19:07:28 +00:00
migrate
- Stagify; cleanup Makefile and reorder the knobs a bit
2014-01-29 12:08:29 +00:00
molden
Catch a couple of missing convertsion to :tu/:tl
2014-05-05 11:15:53 +00:00
mopac
- Add staging support
2014-03-23 18:10:41 +00:00
mrbayes
mummer
Reset the 99 ports still listed under sylvio@
2014-06-11 18:55:29 +00:00
muscle
- add stage support
2014-06-01 11:05:43 +00:00
ncbi-toolkit
Add staging support
2014-03-23 20:50:54 +00:00
njplot
- add stage support
2014-06-01 11:26:39 +00:00
ortep3
Update the default version of GCC used in the Ports Collection from
2014-03-10 20:55:20 +00:00
p5-AcePerl
Remove all the bootstrap files (.bs) from the plists.
2014-06-10 12:14:12 +00:00
p5-Bio-ASN1-EntrezGene
- add stage support
2014-01-06 09:57:19 +00:00
p5-Bio-Das
p5-Bio-Das-Lite
- fix pkg-plist
2014-01-30 07:34:25 +00:00
p5-Bio-GFF3
- Fix PLIST
2014-03-26 14:23:09 +00:00
p5-Bio-Glite
p5-Bio-Graphics
Stagify, remove BROKEN.
2014-06-07 01:54:41 +00:00
p5-Bio-MAGETAB
- update to 1.31
2014-05-16 13:33:02 +00:00
p5-Bio-NEXUS
- Stage support
2014-01-31 12:47:06 +00:00
p5-Bio-Phylo
p5-Bio-SCF
Remove all the bootstrap files (.bs) from the plists.
2014-06-10 12:14:12 +00:00
p5-bioperl
- Update to 1.6.923
2014-05-30 15:46:05 +00:00
p5-bioperl-run
Remove trailing whitespaces from category biology
2014-02-21 13:35:26 +00:00
paml
- Update to 4.8
2014-04-05 10:56:52 +00:00
phd2fasta
Remove indefinite articles and trailing periods from COMMENT, plus
2014-06-09 11:21:52 +00:00
phrap
Replace maintainer's email address with one that seems to work
2014-05-10 18:07:52 +00:00
phred
Replace maintainer's email address with one that seems to work
2014-05-10 18:07:52 +00:00
phylip
The FreeBSD x11@ and graphics team proudly presents
2014-04-16 18:28:47 +00:00
phyml
- Stage support
2014-01-31 12:32:55 +00:00
platon
Update the default version of GCC used in the Ports Collection from
2014-03-10 20:55:20 +00:00
plink
Update the default version of GCC used in the Ports Collection from
2014-03-10 20:55:20 +00:00
plinkseq
Convert to dos2unix
2014-03-07 11:37:35 +00:00
povchem
primer3
Quote ${CC} and similar variables in MAKE_ARGS.
2014-05-20 19:32:39 +00:00
protomol
The FreeBSD x11@ and graphics team proudly presents
2014-04-16 18:28:47 +00:00
psi88
Update the default version of GCC used in the Ports Collection from
2014-03-10 20:55:20 +00:00
py-biopython
- Stage
2014-04-27 01:59:47 +00:00
pycogent
- Stage support [1]
2014-05-02 14:00:13 +00:00
pyfasta
- Update to 0.5.2
2014-04-06 04:05:43 +00:00
pymol
The FreeBSD x11@ and graphics team proudly presents
2014-04-16 18:28:47 +00:00
python-nexus
Remove indefinite articles and trailing periods from COMMENT, plus
2014-06-09 11:21:52 +00:00
recombine
- Support staging
2014-02-16 11:39:42 +00:00
ruby-bio
Support stage
2014-04-07 13:01:26 +00:00
seaview
- Update to 4.5.2
2014-06-04 06:28:56 +00:00
seqan
- add stage support
2014-06-01 11:42:17 +00:00
seqio
Support staging
2014-02-16 11:42:09 +00:00
seqtools
Remove all space characters from Makefile assignments.
2014-06-08 19:51:27 +00:00
sim4
Support staging
2014-02-16 11:43:07 +00:00
ssaha
biology/ssaha: undeprecate, this port fetches and builds fine.
2014-03-09 09:39:50 +00:00
t_coffee
Remove indefinite articles and trailing periods from COMMENT, plus
2014-06-09 11:21:52 +00:00
tinker
- Un-break fetch stage: the name scheme of the source tarballs has changed
2014-04-22 19:28:18 +00:00
treepuzzle
treeviewx
Unbreak
2014-06-04 20:08:15 +00:00
tRNAscan-SE
Support stage
2014-05-05 10:26:15 +00:00
ugene
Update to version 1.13.1.
2014-03-07 07:39:20 +00:00
velvet
- add stage support
2014-06-01 11:33:57 +00:00
wise
- Add staging support
2014-03-24 10:46:35 +00:00
xmolwt
Add staging support
2014-03-24 11:06:56 +00:00
Makefile
Remove expired ports:
2014-04-18 11:17:45 +00:00