Thierry Thomas 7e034e634e - Upgrade to 1.3.18. ... - Since I'm there, pet portlint and stagify. PR: ports/183821 Submitted by: /me Approved by: maintainer's time-out		2013-11-30 15:08:05 +00:00
..
2d-rewriter
2dhf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
abinit	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
afni	Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;	2013-11-13 08:19:34 +00:00
avogadro	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
bddsolve
bft
bodr	- Update to version 10	2013-11-02 17:34:59 +00:00
brian	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
buddy
cdcl
cdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
cdo
cgnslib	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
checkmol
chemical-mime-data
chemtool
chemtool-devel
clhep
colt
crf++
dcl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
devisor
dlpoly-classic	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
dtiquery
ecs	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-eio	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-hutiter	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-matc	Mark deprecated with a deadline of 33 days from today since this is	2013-11-25 00:38:48 +00:00
elmer-meshgen2d
elmergrid
elmerpost	Mark deprecated with a deadline of 33 days from today since this is	2013-11-25 00:43:10 +00:00
epte
euler
fastcap
fasthenry
felt
fisicalab	Added FisicaLab port.	2013-10-08 19:31:32 +00:00
flounder	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
fvcom	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
fvcom-mpi
fvm	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
g3data
gamess	uncomment MANUAL_PACKAGE_BUILD.	2013-11-29 01:45:50 +00:00
gchemutils	- Remove manual creation and removal of share/applications, as it's now in the mtree (categories starting with [st])	2013-10-22 14:01:38 +00:00
gdis	Explicitly link libraries on 10 unmaintained ports	2013-10-07 23:40:23 +00:00
getdp	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ghemical	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ghmm
gnudatalanguage	- Upgrade to 1.3.18.	2013-11-30 15:08:05 +00:00
gramps
gromacs	science/gromacs: Update to version 4.6.4	2013-11-26 17:45:42 +00:00
gsmc
gtamsanalyzer
gwyddion	- Bump dependent ports' revisions (graphics/ilmbase and graphics/OpenEXR)	2013-11-20 14:25:28 +00:00
h5utils
harminv	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
hdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
hdf5
hdf5-18
hdf-java	- Convert to dos2unix.mk	2013-11-19 23:08:44 +00:00
hs-bio	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
InsightToolkit	- Take maintainership	2013-10-31 19:51:37 +00:00
isaac-cfd	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
jmol	- Update to version 13.2.3 [1]	2013-11-07 16:53:33 +00:00
jstrack
kalzium	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
kst2	- Support staging	2013-10-23 13:08:41 +00:00
lamprop
libctl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
libghemical	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
libint
libkml	- Take maintainership	2013-11-10 07:10:14 +00:00
liblinear
liboglappth
libquantum
libsvm
libsvm-python
linsmith	- Remove manual creation and removal of share/applications, as it's now in the mtree (categories starting with [st])	2013-10-22 14:01:38 +00:00
massxpert	- Remove manual creation and removal of share/applications, as it's now in the mtree (categories starting with [st])	2013-10-22 14:01:38 +00:00
mbdyn	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mcstas	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
medit
meep	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mei	- Upgrade to 1.0.4;	2013-11-26 21:30:22 +00:00
minc
minc2	Fix package name collision	2013-10-14 06:52:32 +00:00
mol2ps
mpb	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mpqc	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mpqc-mpich
ncs	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
netcdf	- Fix PKGNAME collision	2013-11-06 17:34:52 +00:00
netcdf3-ftn	- Fix PKGNAME collision	2013-11-06 17:35:50 +00:00
netcdf4
netcdf-ftn
nifticlib
omnetpp	- Chase x11-toolkits/blt library name change	2013-11-19 11:15:07 +00:00
openbabel	Add upstream patch to fix the build with libc++.	2013-11-13 15:49:25 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter-iArea	- Support STAGEDIR	2013-09-30 20:59:03 +00:00
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-PerlMol
p5-Physics-Unit
paje
paraview	science/paraview: add <unistd.h>, <cstddef>, other c++ fixes	2013-10-02 12:00:31 +00:00
peekabot	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pnetcdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
psi3	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
psychopy	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-coards
py-DendroPy
py-h5py	science/py-h5py: update to 2.2.0	2013-11-13 21:28:29 +00:00
py-hcluster	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-mdp	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-mlpy	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-netCDF4	- Convert to dos2unix.mk	2013-11-19 23:08:44 +00:00
py-obspy	- Fix build with distribute -> setuptools change	2013-11-27 19:21:00 +00:00
py-paida
py-pupynere	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-pydap	science/py-pydap: update to 3.1.1	2013-11-29 11:40:24 +00:00
py-pydicom
py-scikit-learn	Use PYDISTUTILS_AUTOPLIST.	2013-11-05 12:37:28 +00:00
py-scimath	- Update WWW:	2013-11-20 20:51:25 +00:00
py-scipy	- Fix distinfo	2013-11-18 15:36:42 +00:00
py-ws2300
pybrain	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pycdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pynn	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pyteomics	Update to 2.2.1	2013-11-29 11:57:18 +00:00
pyteomics.biolccc	- Update WWW:	2013-11-20 20:51:25 +00:00
qcl	- Update to version 0.6.3	2013-10-30 17:57:33 +00:00
qtresistors	- Convert to USES=qmake (and other USES while I'm here)	2013-11-22 12:55:00 +00:00
R-cran-AMORE	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-bayesm	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-DCluster	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-e1071	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-eco	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-Epi	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-epicalc	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-snow	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
R-cran-som	Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).	2013-11-27 18:56:43 +00:00
ruby-dcl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ruby-gphys	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ruby-netcdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
rubygem-ai4r	- Add stage support	2013-10-30 02:56:33 +00:00
silo
simlib
step	Add my upstream commit that fixes the build with libc++.	2013-11-03 22:48:12 +00:00
svmlight
szip
udunits	- Strip shared library	2013-10-10 14:32:08 +00:00
v_sim	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
veusz	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
vmd
voro++
x11iraf
xfce4-equake-plugin	- Update MASTER_SITES macro, xfce4-equake-plugin is now hosted on	2013-10-31 17:11:01 +00:00
xmakemol
xmds
Makefile	science/py-pydap: Implementation of the Opendap/DODS protocol	2013-10-30 15:51:04 +00:00