1
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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-14 03:10:47 +00:00
freebsd-ports/biology
Pav Lucistnik dc8e5f28fa - Update to 1.0.0
- Provide OPTIONS
- Take maintainership

PR:		ports/94123
Submitted by:	Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-04-25 22:09:29 +00:00
..
ariadne SHA256ify 2006-01-22 08:34:46 +00:00
artemis
avida
babel
belvu Add belvu 2.29, a viewer for multiple sequence alignments. 2006-03-15 10:24:57 +00:00
biojava BROKEN: Does not compile 2006-04-22 22:10:17 +00:00
blast
blat Add blat 33, a fast tool for local sequence similarity searches. 2006-03-15 10:26:12 +00:00
chemeq
clustalw SHA256ify 2006-01-22 08:34:46 +00:00
coalesce
crimap SHA256ify 2006-01-22 08:34:46 +00:00
distribfold Use SUB_FILES for pkg-message 2006-04-01 12:34:24 +00:00
dna-qc SHA256ify (manually done and checked) 2006-01-22 09:54:26 +00:00
dotter Add dotter 20021204 # last modified date in FTP server, a viewer for 2006-03-15 10:35:24 +00:00
embassy For EMBOSS: 2006-03-31 09:43:21 +00:00
emboss For EMBOSS: 2006-03-31 09:43:21 +00:00
fasta Use SUB_FILES for pkg-message 2006-04-01 12:34:24 +00:00
fasta3 - Update to 34.t25.d5 2006-03-20 22:23:24 +00:00
fastdnaml
finchtv SHA256ify 2006-01-22 08:34:46 +00:00
fluctuate
garlic Update to 1.5 2006-03-15 08:10:49 +00:00
genpak
gff2ps SHA256ify 2006-01-22 08:34:46 +00:00
gperiodic
grappa SHA256ify 2006-01-22 08:34:46 +00:00
hmmer SHA256ify 2006-01-22 08:34:46 +00:00
jalview Jalview is a multiple alignment editor written in Java. It is used widely in a 2006-02-13 09:42:13 +00:00
kinemage Reset jeremy@external.org who has not responded to email asking about 2006-04-05 05:46:33 +00:00
L-Breeder
lagan Add lagan 1.2, efficient tools for large-scale multiple alignments of 2006-03-16 22:31:26 +00:00
lamarc
libgenome Conversion to a single libtool environment. 2006-02-23 10:40:44 +00:00
lsysexp SHA256ify 2006-01-22 08:34:46 +00:00
mafft - Update to 5.743 2006-03-19 12:59:16 +00:00
migrate
molden
mopac Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about 2006-04-05 06:13:46 +00:00
nab SHA256ify 2006-01-22 08:34:46 +00:00
ncbi-toolkit
ortep3 Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about 2006-04-05 06:13:46 +00:00
p5-AcePerl SHA256ify 2006-01-22 08:34:46 +00:00
p5-Bio-ASN1-EntrezGene SHA256ify 2006-01-22 08:34:46 +00:00
p5-Bio-Das SHA256ify 2006-01-22 08:34:46 +00:00
p5-bioperl SHA256ify 2006-01-22 08:34:46 +00:00
p5-bioperl-devel
paml
phylip Put PORTEPOCH back. 2006-02-09 01:17:59 +00:00
platon Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about 2006-04-05 06:13:46 +00:00
povchem
primer3 SHA256ify 2006-01-22 08:34:46 +00:00
psi88 Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about 2006-04-05 06:13:46 +00:00
py-biopython
pymol SHA256ify 2006-01-22 08:34:46 +00:00
rasmol
recombine
ruby-bio - Update to 1.0.0 2006-04-25 22:09:29 +00:00
seaview - Update to 2006.02.13 2006-04-05 01:58:03 +00:00
seqio SHA256ify 2006-01-22 08:34:46 +00:00
sim4
t_coffee Update to 3.27. 2006-02-10 09:45:28 +00:00
tinker
treepuzzle SHA256ify 2006-01-22 08:34:46 +00:00
treeviewx
tRNAscan-SE SHA256ify 2006-01-22 08:34:46 +00:00
wise SHA256ify 2006-01-22 08:34:46 +00:00
xdrawchem BROKEN: Configure fails 2006-02-20 01:46:03 +00:00
xmolwt Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about 2006-04-05 06:13:46 +00:00
Makefile Add lagan 1.2, efficient tools for large-scale multiple alignments of 2006-03-16 22:31:26 +00:00