mirror of
https://git.FreeBSD.org/ports.git
synced 2025-01-24 09:25:01 +00:00
46 lines
1.6 KiB
Makefile
46 lines
1.6 KiB
Makefile
PORTNAME= ngs
|
|
DISTVERSION= 2.11.2
|
|
CATEGORIES= biology
|
|
PKGNAMESUFFIX= -sdk
|
|
|
|
MAINTAINER= yuri@FreeBSD.org
|
|
COMMENT= Tools and libraries for using data in the INSDC Sequence Read Archives
|
|
|
|
LICENSE= PD
|
|
LICENSE_FILE= ${WRKSRC}/LICENSE
|
|
|
|
BROKEN_aarch64= fails to configure: unsupported architecture 'FreeBSD'
|
|
BROKEN_armv6= fails to configure: unsupported architecture 'FreeBSD':'arm'
|
|
BROKEN_armv7= fails to configure: unsupported architecture 'FreeBSD':'arm'
|
|
BROKEN_riscv64= fails to configure: unsupported architecture 'FreeBSD'
|
|
NOT_FOR_ARCHS= powerpc64
|
|
NOT_FOR_ARCHS_REASON= os-arch.prl needs to be taught about powerpc64
|
|
|
|
USES= compiler:c++11-lang gmake perl5
|
|
USE_PERL5= build
|
|
USE_LDCONFIG= yes
|
|
|
|
USE_GITHUB= yes
|
|
GH_ACCOUNT= ncbi
|
|
|
|
HAS_CONFIGURE= yes
|
|
CONFIGURE_ARGS= --prefix="${STAGEDIR}${PREFIX}" --build-prefix="${WRKSRC}/build"
|
|
|
|
ALL_TARGET= ngs-sdk
|
|
|
|
post-extract:
|
|
@cd ${WRKSRC}/ngs-sdk/ngs/unix && ${LN} -s x86_64 amd64
|
|
|
|
do-install: # install target from the project breaks: https://github.com/ncbi/ngs/issues/34
|
|
# install headers
|
|
cd ${WRKSRC}/ngs-sdk && ${COPYTREE_SHARE} ngs ${STAGEDIR}${PREFIX}/include
|
|
${RM} -r ${STAGEDIR}${PREFIX}/include/ngs/win
|
|
# install libraries
|
|
cd ${WRKSRC}/build/ngs-sdk/FreeBSD/clang/${ARCH}/rel/lib && ${COPYTREE_SHARE} . ${STAGEDIR}${PREFIX}/lib
|
|
# The above command installs broken-looking static libs with symlinks.
|
|
# This is intentional, see comments https://github.com/ncbi/ncbi-vdb/issues/36#issuecomment-817990790 This may change in future versions.
|
|
# strip
|
|
${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libngs-sdk.so.${DISTVERSION}
|
|
|
|
.include <bsd.port.mk>
|