Wen Heping 5b1371480d science/R-cran-AMORE: Mark it DEPRECATED		2022-07-12 04:41:02 +00:00
..
2d-rewriter
abinit
afni	science/afni: update to 22.1.14	2022-06-28 07:22:58 +02:00
agrum
aircraft-datcom
ALPSCore
antioch
apbs
ascent
atompaw
avogadro2
avogadrolibs
axom
bagel	science/bagel: Update 1.2.2 -> 1.2.2-132	2022-06-23 00:39:22 -07:00
bddsolve
berkeleygw
bodr
buddy
cantera	science/cantera: Minor simplification	2022-06-29 01:21:31 -07:00
cdcl
cdf
cdk
cdo
cgnslib
cgribex
checkmol	lang/fpc: Fix build issues building some fpc based apps	2022-06-20 20:17:20 -05:00
chemical-mime-data
chemicalfun
chemps2
chemtool
chemtool-devel
chimes-calculator
chrono
clhep
clipper
code_saturne
colt
conduit
coordgenlibs
cp2k	science/cp2k: Update 9.1.0 -> 2022.1	2022-07-11 21:10:08 -07:00
cp2k-data	science/cp2k-data: Update 9.1.0 -> 2022.1	2022-07-11 21:10:07 -07:00
crf++
csvtk
dakota
dalton
dcl
devisor
dftbplus	science/dftbplus: unbreak on powerpc* / main	2022-07-04 02:00:33 +02:00
dftd4
dkh
dlib-cpp
drawxtl
dvc
dynare
eccodes
elk	science/elk: Update 8.4.21 -> 8.4.30	2022-07-05 15:30:25 -07:00
elmerfem
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet	science/fastjet: Fix CGAL option; Add tests	2022-07-07 10:16:49 -07:00
fisicalab
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib
gchemutils
gdma
getdp
ghemical	science/ghemical: Fix path to mopac port	2022-06-19 09:02:23 -07:00
ghmm
gnudatalanguage
gpaw-setups
gramps	science/gramps: remove option for expired py-bsddb3	2022-07-02 11:31:15 +02:00
grib_api
gromacs	science/gromacs: Change WWW to https	2022-07-06 23:45:25 -07:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
healpix
helfem	science/helfem: Fix build with clang-14	2022-06-24 12:29:39 -07:00
hepmc3
highfive
hypre
iboview
InsightToolkit
isaac-cfd
jdftx
jmol	science/jmol: Update 14.32.62 -> 14.32.63	2022-07-11 18:24:29 -07:00
jstrack
kalzium	KDE: Update KDE Gear to 22.04.3	2022-07-07 23:49:42 +02:00
kim-api
kst2	science/kst2: Fix build with newer HDF5 (1.10.8+ or 1.12.1+)	2022-07-07 20:36:28 +08:00
lammps	science/lammps: Fix MPI option; Change VTK option to use VTK-9.1	2022-06-28 10:53:36 -07:00
lamprop
latte
libaec
libccp4
libcint
libctl
libecpint
libefp
libgeodecomp
libgetar	science/libgetar: New port: Library to read and write GEneric Trajectory ARchives	2022-06-27 10:58:02 -07:00
libghemical
libgridxc
libint
libint2	science/libint2: Update 2.7.1 -> 2.7.2	2022-06-26 00:20:17 -07:00
libkml	devel/googletest: update to 1.12.1	2022-06-30 15:27:20 +00:00
liblinear
libmbd
libmsym
libnegf
liboglappth
libquantum
libssm
libsvm
libsvm-python
libtensorflow1
libvdwxc
libxc
liggghts	science/liggghts: Update 3.8.0-26 -> 3.8.0-45	2022-06-28 09:48:28 -07:00
linux-zotero
luscus
madness
maeparser
massxpert
mbdyn
mcstas
mcstas-comps
mctc-lib
mcxtrace
mcxtrace-comps
mdynamix
medit
metaphysicl
minc2
mmdb2
mmtf-cpp
mol2ps	lang/fpc: Fix build issues building some fpc based apps	2022-06-20 20:17:20 -05:00
molgif
molscript
molsketch
mopac	biology/mopac: Move to science/mopac; Add TIMESTAMP to distinfo; Take maintainership	2022-06-19 00:52:28 -07:00
mpb
mpqc
msms
mstore
multicharge
multiwfn
namd
nest
netcdf	science/netcdf: Update to 4.9.0	2022-06-22 04:57:22 +08:00
netcdf-cxx
netcdf-fortran
nifticlib
nwchem
nwchem-data
octopus
openbabel
openems	science/openems: Update 0.0.35-71 -> 0.0.35-76	2022-06-26 14:37:35 -07:00
openkim
openkim-models
openmc
openmolcas
openmx
opensim-core
opensph
opsin
orthanc	devel/googletest: update to 1.12.1	2022-06-30 15:27:20 +00:00
orthanc-dicomweb
orthanc-mysql
orthanc-postgresql
orthanc-webviewer
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2
paje
paraview	science/paraview: unbreak after the upgrade of science/netcdf	2022-07-03 14:48:43 +02:00
pastix
pcmsolver
PETSc
phonopy
plumed
pnetcdf
precice	science/precice: Add options; Backport patch provided by upstream	2022-06-21 14:02:33 -07:00
pulseview
py-abipy
py-access
py-asap3	science/py-asap3: Fix python suffix in shared library name	2022-06-29 01:17:56 -07:00
py-asdf
py-asdf-standard
py-asdf-transform-schemas
py-ase	science/py-ase: Add test target	2022-06-19 03:01:29 -07:00
py-avogadrolibs
py-cdo
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-core	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-google	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-ionq	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-pasqal	science/py-cirq-*: Update 0.14.1 -> 0.15.0	2022-07-01 01:44:59 -07:00
py-cirq-rigetti	science/py-cirq-rigetti: New port: Cirq module to run on Rigetti quantum computers	2022-07-01 18:55:15 -07:00
py-coards
py-DendroPy
py-dipy
py-dlib
py-eccodes
py-esda
py-fresnel
py-geolinks
py-geomet
py-geometer	science/py-geometer: Revert d68b12c0a6	2022-07-07 20:36:18 +08:00
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py
py-hiphive
py-hoomd-blue
py-inequality
py-jupyter_jsmol
py-kim-query
py-kinematics
py-kliff
py-liac-arff
py-libgetar	science/py-libgetar: Fix tests	2022-06-27 15:39:42 -07:00
py-libpysal
py-lifelines
py-MDAnalysis	science/py-MDAnalysis*: upgrade to 2.2.0	2022-06-21 19:26:21 +02:00
py-MDAnalysisTests	science/py-MDAnalysis*: upgrade to 2.2.0	2022-06-21 19:26:21 +02:00
py-mdp
py-mmtf-python
py-molmod
py-moltemplate	science/py-moltemplate: Update 2.20.5 -> 2.20.6	2022-07-01 15:41:38 -07:00
py-netCDF4
py-netcdf-flattener
py-nibabel
py-nilearn
py-obspy
py-oddt
py-OpenFermion
py-OpenMC
py-openpiv
py-paida
py-paramz
py-phono3py
py-phonopy
py-PubChemPy
py-pupynere
py-py3Dmol
py-pyaixi
py-pyberny
py-pycsw
py-pydicom
py-PyFR
py-pygeodesy	science/py-pygeodesy: Add GitHub to MASTER_SITES	2022-07-12 05:47:05 +08:00
py-pygeometa	science/py-pygeometa: Update to 0.11.1	2022-06-22 00:36:23 +08:00
py-pygmo2
py-pyked
py-pymatgen
py-pymol
py-PyNE
py-pyosf
py-pyprecice	science/py-pyprecice: New port: Coupling library for partitioned multi-physics simulations	2022-06-20 09:53:12 -07:00
py-pysal
py-pyscf
py-pyteomics
py-qcelemental
py-qcengine
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-segregation	science/py-segregation: Update to 2.3.1	2022-07-11 21:50:36 +08:00
py-segyio
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti
py-spglib
py-tensorflow
py-thewalrus
py-tobler	science/py-tobler: Update USES=python	2022-07-11 21:50:37 +08:00
py-trainstation
py-veusz
pybrain
pynn
q
qbox	science/qbox: Update 1.74.2 -> 1.74.3	2022-07-05 20:20:52 -07:00
qcl
qiskit-aer
qmcpack
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet
qwalk
R-cran-AMORE	science/R-cran-AMORE: Mark it DEPRECATED	2022-07-12 04:41:02 +00:00
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi	science/R-cran-Epi: Update to 2.47	2022-07-12 02:10:02 +00:00
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit	science/rdkit: Update 2022.03.3 -> 2022.03.4	2022-07-05 20:20:52 -07:00
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf
scidavis
segyio
shelxle	science/shelxle: Update 1.0.1401 -> 1.0.1406	2022-07-05 20:20:52 -07:00
siconos
siesta	science/siesta: unbreak on powerpc* / main	2022-07-04 02:00:31 +02:00
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simple-dftd3
simsmith
smoldyn
sparta
spglib
step	KDE: Update KDE Gear to 22.04.3	2022-07-07 23:49:42 +02:00
svmlight
tblite
teem
tfel
tfel-edf
thermofun
tinker
trilinos	science/trilinos: Broken on i386	2022-07-10 16:51:17 -07:00
udunits
ukrmol+
v_sim
vipster
vmd
voro++
votca
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero
Makefile	science/trilinos: New port: Solver for multi-physics engineering and scientific problems	2022-07-08 09:30:59 -07:00