.. |
2d-rewriter
|
|
|
2dhf
|
|
|
abinit
|
|
|
afni
|
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
|
2013-11-13 08:19:34 +00:00 |
avogadro
|
Convert LIB_DEPENDS for ports depending on boost
|
2013-12-12 14:15:03 +00:00 |
bddsolve
|
Convert LIB_DEPENDS for ports depending on boost
|
2013-12-12 14:15:03 +00:00 |
bft
|
|
|
bodr
|
|
|
brian
|
|
|
buddy
|
|
|
cdcl
|
|
|
cdf
|
|
|
cdo
|
|
|
cgnslib
|
|
|
checkmol
|
|
|
chemical-mime-data
|
|
|
chemtool
|
|
|
chemtool-devel
|
|
|
clhep
|
|
|
colt
|
|
|
crf++
|
|
|
dcl
|
|
|
devisor
|
|
|
dlpoly-classic
|
|
|
dtiquery
|
|
|
ecs
|
|
|
elmer-eio
|
|
|
elmer-hutiter
|
|
|
elmer-matc
|
Mark deprecated with a deadline of 33 days from today since this is
|
2013-11-25 00:38:48 +00:00 |
elmer-meshgen2d
|
|
|
elmergrid
|
|
|
elmerpost
|
Mark deprecated with a deadline of 33 days from today since this is
|
2013-11-25 00:43:10 +00:00 |
epte
|
|
|
euler
|
|
|
fastcap
|
|
|
fasthenry
|
|
|
felt
|
|
|
fisicalab
|
|
|
flounder
|
|
|
fvcom
|
|
|
fvcom-mpi
|
|
|
fvm
|
|
|
g3data
|
|
|
gamess
|
uncomment MANUAL_PACKAGE_BUILD.
|
2013-11-29 01:45:50 +00:00 |
gchemutils
|
Add patch to unbreak with libc++ 10.0+.
|
2013-12-03 22:10:25 +00:00 |
gdis
|
|
|
getdp
|
|
|
ghemical
|
|
|
ghmm
|
|
|
gnudatalanguage
|
- Upgrade to 1.3.18.
|
2013-11-30 15:08:05 +00:00 |
gramps
|
|
|
gromacs
|
science/gromacs: Update to version 4.6.4
|
2013-11-26 17:45:42 +00:00 |
gsmc
|
|
|
gtamsanalyzer
|
|
|
gwyddion
|
- Bump dependent ports' revisions (graphics/ilmbase and graphics/OpenEXR)
|
2013-11-20 14:25:28 +00:00 |
h5utils
|
|
|
harminv
|
|
|
hdf
|
|
|
hdf5
|
|
|
hdf5-18
|
- Fix PKGNAME collision
|
2013-12-11 18:38:53 +00:00 |
hdf-java
|
- Convert to dos2unix.mk
|
2013-11-19 23:08:44 +00:00 |
hs-bio
|
|
|
InsightToolkit
|
|
|
isaac-cfd
|
|
|
jmol
|
- Update to version 13.2.3 [1]
|
2013-11-07 16:53:33 +00:00 |
jstrack
|
|
|
kalzium
|
|
|
kst2
|
Add patches to fix build on 10 and head
|
2013-12-09 15:08:42 +00:00 |
lamprop
|
|
|
libctl
|
|
|
libghemical
|
|
|
libint
|
|
|
libkml
|
- Take maintainership
|
2013-11-10 07:10:14 +00:00 |
liblinear
|
|
|
liboglappth
|
|
|
libquantum
|
|
|
libsvm
|
|
|
libsvm-python
|
|
|
linsmith
|
|
|
massxpert
|
|
|
mbdyn
|
|
|
mcstas
|
|
|
medit
|
|
|
meep
|
|
|
mei
|
- Upgrade to 1.0.4;
|
2013-11-26 21:30:22 +00:00 |
minc
|
|
|
minc2
|
Mark as broken: does not build with newer hdf5 version:
|
2013-12-06 11:44:48 +00:00 |
mol2ps
|
|
|
mpb
|
|
|
mpqc
|
|
|
mpqc-mpich
|
|
|
ncs
|
|
|
netcdf
|
- Fix PKGNAME collision
|
2013-11-06 17:34:52 +00:00 |
netcdf3-ftn
|
- Fix PKGNAME collision
|
2013-11-06 17:35:50 +00:00 |
netcdf4
|
- Use CONFLICTS_INSTALL instead of CONFLICTS
|
2013-12-10 19:17:08 +00:00 |
netcdf-ftn
|
- Remove LATEST_LINK
|
2013-12-10 19:18:39 +00:00 |
nifticlib
|
|
|
openbabel
|
Add upstream patch to fix the build with libc++.
|
2013-11-13 15:49:25 +00:00 |
p5-Algorithm-SVMLight
|
|
|
p5-Chemistry-3DBuilder
|
|
|
p5-Chemistry-Bond-Find
|
|
|
p5-Chemistry-Canonicalize
|
|
|
p5-Chemistry-Elements
|
Support STAGEDIR.
|
2013-11-06 01:32:11 +00:00 |
p5-Chemistry-File-MDLMol
|
|
|
p5-Chemistry-File-Mopac
|
|
|
p5-Chemistry-File-PDB
|
|
|
p5-Chemistry-File-SLN
|
|
|
p5-Chemistry-File-SMARTS
|
|
|
p5-Chemistry-File-SMILES
|
|
|
p5-Chemistry-File-VRML
|
|
|
p5-Chemistry-File-XYZ
|
|
|
p5-Chemistry-FormulaPattern
|
|
|
p5-Chemistry-InternalCoords
|
|
|
p5-Chemistry-Isotope
|
|
|
p5-Chemistry-MacroMol
|
Support STAGEDIR.
|
2013-11-06 01:32:11 +00:00 |
p5-Chemistry-MidasPattern
|
|
|
p5-Chemistry-Mok
|
|
|
p5-Chemistry-Mol
|
Support STAGEDIR.
|
2013-11-06 01:32:11 +00:00 |
p5-Chemistry-Pattern
|
|
|
p5-Chemistry-Reaction
|
|
|
p5-Chemistry-Ring
|
|
|
p5-Geo-BUFR
|
Support STAGEDIR.
|
2013-11-06 01:32:11 +00:00 |
p5-Geo-Coordinates-Converter
|
Support STAGEDIR.
|
2013-11-06 01:32:11 +00:00 |
p5-Geo-Coordinates-Converter-iArea
|
|
|
p5-Geo-ReadGRIB
|
|
|
p5-Geo-WebService-Elevation-USGS
|
Support STAGEDIR.
|
2013-11-06 01:32:11 +00:00 |
p5-PerlMol
|
|
|
p5-Physics-Unit
|
|
|
paje
|
|
|
paraview
|
|
|
peekabot
|
Convert LIB_DEPENDS for ports depending on boost
|
2013-12-12 14:15:03 +00:00 |
pnetcdf
|
|
|
psi3
|
|
|
psychopy
|
|
|
py-coards
|
|
|
py-DendroPy
|
|
|
py-h5py
|
science/py-h5py: update to 2.2.1
|
2013-12-13 19:59:42 +00:00 |
py-hcluster
|
|
|
py-mdp
|
|
|
py-mlpy
|
|
|
py-netCDF4
|
- Convert to dos2unix.mk
|
2013-11-19 23:08:44 +00:00 |
py-obspy
|
- Fix build with distribute -> setuptools change
|
2013-11-27 19:21:00 +00:00 |
py-paida
|
|
|
py-pupynere
|
|
|
py-pyaixi
|
science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm
|
2013-12-08 14:12:47 +00:00 |
py-pydap
|
science/py-pydap: update to 3.1.1
|
2013-11-29 11:40:24 +00:00 |
py-pydicom
|
|
|
py-scikit-learn
|
Use PYDISTUTILS_AUTOPLIST.
|
2013-11-05 12:37:28 +00:00 |
py-scimath
|
- Update WWW:
|
2013-11-20 20:51:25 +00:00 |
py-scipy
|
- Fix distinfo
|
2013-11-18 15:36:42 +00:00 |
py-ws2300
|
|
|
pybrain
|
|
|
pycdf
|
|
|
pynn
|
|
|
pyteomics
|
Update to 2.2.1
|
2013-11-29 11:57:18 +00:00 |
pyteomics.biolccc
|
- Update WWW:
|
2013-11-20 20:51:25 +00:00 |
qcl
|
|
|
qtresistors
|
- Convert to USES=qmake (and other USES while I'm here)
|
2013-11-22 12:55:00 +00:00 |
R-cran-AMORE
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-bayesm
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-DCluster
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-e1071
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-eco
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-Epi
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-epicalc
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-snow
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
R-cran-som
|
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
|
2013-11-27 18:56:43 +00:00 |
ruby-dcl
|
|
|
ruby-gphys
|
|
|
ruby-netcdf
|
|
|
rubygem-ai4r
|
|
|
silo
|
|
|
simlib
|
|
|
step
|
|
|
svmlight
|
|
|
szip
|
|
|
udunits
|
|
|
v_sim
|
|
|
veusz
|
|
|
vmd
|
|
|
voro++
|
|
|
x11iraf
|
|
|
xfce4-equake-plugin
|
|
|
xmakemol
|
|
|
xmds
|
|
|
Makefile
|
science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm
|
2013-12-08 14:12:47 +00:00 |