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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-25 00:51:21 +00:00
freebsd-ports/science
William Grzybowski 8fac3afe60 science/py-h5py: update to 2.2.1
- Update to 2.2.1
- Add EXAMPLES

PR:		ports/184746
Submitted by:	maintainer
2013-12-13 19:59:42 +00:00
..
2d-rewriter
2dhf
abinit
afni Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1; 2013-11-13 08:19:34 +00:00
avogadro Convert LIB_DEPENDS for ports depending on boost 2013-12-12 14:15:03 +00:00
bddsolve Convert LIB_DEPENDS for ports depending on boost 2013-12-12 14:15:03 +00:00
bft
bodr
brian
buddy
cdcl
cdf
cdo
cgnslib
checkmol
chemical-mime-data
chemtool
chemtool-devel
clhep
colt
crf++
dcl
devisor
dlpoly-classic
dtiquery
ecs
elmer-eio
elmer-hutiter
elmer-matc Mark deprecated with a deadline of 33 days from today since this is 2013-11-25 00:38:48 +00:00
elmer-meshgen2d
elmergrid
elmerpost Mark deprecated with a deadline of 33 days from today since this is 2013-11-25 00:43:10 +00:00
epte
euler
fastcap
fasthenry
felt
fisicalab
flounder
fvcom
fvcom-mpi
fvm
g3data
gamess uncomment MANUAL_PACKAGE_BUILD. 2013-11-29 01:45:50 +00:00
gchemutils Add patch to unbreak with libc++ 10.0+. 2013-12-03 22:10:25 +00:00
gdis
getdp
ghemical
ghmm
gnudatalanguage - Upgrade to 1.3.18. 2013-11-30 15:08:05 +00:00
gramps
gromacs science/gromacs: Update to version 4.6.4 2013-11-26 17:45:42 +00:00
gsmc
gtamsanalyzer
gwyddion - Bump dependent ports' revisions (graphics/ilmbase and graphics/OpenEXR) 2013-11-20 14:25:28 +00:00
h5utils
harminv
hdf
hdf5
hdf5-18 - Fix PKGNAME collision 2013-12-11 18:38:53 +00:00
hdf-java - Convert to dos2unix.mk 2013-11-19 23:08:44 +00:00
hs-bio
InsightToolkit
isaac-cfd
jmol - Update to version 13.2.3 [1] 2013-11-07 16:53:33 +00:00
jstrack
kalzium
kst2 Add patches to fix build on 10 and head 2013-12-09 15:08:42 +00:00
lamprop
libctl
libghemical
libint
libkml - Take maintainership 2013-11-10 07:10:14 +00:00
liblinear
liboglappth
libquantum
libsvm
libsvm-python
linsmith
massxpert
mbdyn
mcstas
medit
meep
mei - Upgrade to 1.0.4; 2013-11-26 21:30:22 +00:00
minc
minc2 Mark as broken: does not build with newer hdf5 version: 2013-12-06 11:44:48 +00:00
mol2ps
mpb
mpqc
mpqc-mpich
ncs
netcdf - Fix PKGNAME collision 2013-11-06 17:34:52 +00:00
netcdf3-ftn - Fix PKGNAME collision 2013-11-06 17:35:50 +00:00
netcdf4 - Use CONFLICTS_INSTALL instead of CONFLICTS 2013-12-10 19:17:08 +00:00
netcdf-ftn - Remove LATEST_LINK 2013-12-10 19:18:39 +00:00
nifticlib
openbabel Add upstream patch to fix the build with libc++. 2013-11-13 15:49:25 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-PerlMol
p5-Physics-Unit
paje
paraview
peekabot Convert LIB_DEPENDS for ports depending on boost 2013-12-12 14:15:03 +00:00
pnetcdf
psi3
psychopy
py-coards
py-DendroPy
py-h5py science/py-h5py: update to 2.2.1 2013-12-13 19:59:42 +00:00
py-hcluster
py-mdp
py-mlpy
py-netCDF4 - Convert to dos2unix.mk 2013-11-19 23:08:44 +00:00
py-obspy - Fix build with distribute -> setuptools change 2013-11-27 19:21:00 +00:00
py-paida
py-pupynere
py-pyaixi science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm 2013-12-08 14:12:47 +00:00
py-pydap science/py-pydap: update to 3.1.1 2013-11-29 11:40:24 +00:00
py-pydicom
py-scikit-learn Use PYDISTUTILS_AUTOPLIST. 2013-11-05 12:37:28 +00:00
py-scimath - Update WWW: 2013-11-20 20:51:25 +00:00
py-scipy - Fix distinfo 2013-11-18 15:36:42 +00:00
py-ws2300
pybrain
pycdf
pynn
pyteomics Update to 2.2.1 2013-11-29 11:57:18 +00:00
pyteomics.biolccc - Update WWW: 2013-11-20 20:51:25 +00:00
qcl
qtresistors - Convert to USES=qmake (and other USES while I'm here) 2013-11-22 12:55:00 +00:00
R-cran-AMORE Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-bayesm Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-DCluster Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-e1071 Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-eco Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-Epi Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-epicalc Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-snow Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-som Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
ruby-dcl
ruby-gphys
ruby-netcdf
rubygem-ai4r
silo
simlib
step
svmlight
szip
udunits
v_sim
veusz
vmd
voro++
x11iraf
xfce4-equake-plugin
xmakemol
xmds
Makefile science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm 2013-12-08 14:12:47 +00:00