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mirror of https://git.FreeBSD.org/ports.git synced 2025-01-10 07:04:03 +00:00
freebsd-ports/science
Mathieu Arnold 065c026fe5 Fix ports that confused the meaning of WRKDIR and WRKSRC.
PR:		204056
Submitted by:	mat
Reviewed by:	bapt
Sponsored by:	Absolight
Differential Revision:	https://reviews.freebsd.org/D2735
2015-11-05 12:36:25 +00:00
..
2d-rewriter - Change host to Github 2015-09-11 07:11:23 +00:00
afni - Pet portlint 2015-10-01 21:34:36 +00:00
avogadro
bddsolve
bft
bodr
brian
buddy
cdcl
cdf Follow-up commit to r396576 since I've forgotten to fix some things: 2015-09-10 16:31:33 +00:00
cdo - Convert to new test framework 2015-10-01 15:56:00 +00:00
cgnslib
cgribex
checkmol Fix ports that confused the meaning of WRKDIR and WRKSRC. 2015-11-05 12:36:25 +00:00
chemical-mime-data
chemtool
chemtool-devel
clhep
colt
crf++
dcl
devisor - Switch to options helpers 2015-09-24 21:19:27 +00:00
dlpoly-classic - Update to 1.10.0 2015-09-17 02:58:01 +00:00
ecs
epte
fastcap
fasthenry
fisicalab Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
fvcom
fvcom-mpi - Update to 1.10.0 2015-09-17 02:58:01 +00:00
fvm
gchemutils
getdp
ghemical
ghmm - Update to 0.9.r3 2015-09-18 06:16:31 +00:00
gnudatalanguage graphics/GraphicsMagick: Upgrade version 1.3.21 => 1.3.22 2015-10-11 16:20:41 +00:00
gramps
grib_api
gromacs
gsmc
gtamsanalyzer Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
gwyddion Update to version 2.42 2015-10-29 20:45:12 +00:00
h5utils
harminv
hdf Reformat port description text and split it into three paragraphs to improve 2015-09-10 17:11:12 +00:00
hdf5 - Convert to new test framework 2015-10-01 15:56:04 +00:00
hdf-java
hs-bio
InsightToolkit Update to 4.8.1. 2015-10-16 14:19:31 +00:00
isaac-cfd
jmol Remove trailing whitespace from Makefiles, M-X. 2015-10-08 15:12:22 +00:00
jstrack
kalzium
kst2
lamprop
libctl
libghemical
libint - Update to version 1.1.6 2015-10-24 17:55:23 +00:00
libkml - Update BUILD_DEPENDS: remove redundant LOCALBASE/bin 2015-11-04 20:17:14 +00:00
liblinear - Switch to options helpers 2015-09-25 11:50:47 +00:00
liboglappth Remove trailing whitespace from Makefiles, M-X. 2015-10-08 15:12:22 +00:00
libquantum
libsvm
libsvm-python
libxc Add a port of Libxc, a library of exchange-correlation functionals for 2015-10-26 10:10:10 +00:00
linsmith
massxpert Drop USES=iconv. 2015-09-11 09:43:07 +00:00
mbdyn
mcstas
mcstas-comps
medit Fix ports that confused the meaning of WRKDIR and WRKSRC. 2015-11-05 12:36:25 +00:00
meep
mei
metaf2xml
minc2
mol2ps Fix ports that confused the meaning of WRKDIR and WRKSRC. 2015-11-05 12:36:25 +00:00
mpb
mpqc - Add missing manpage 2015-10-01 07:04:30 +00:00
mpqc-mpich - Add missing manpage 2015-10-01 07:04:30 +00:00
ncs
netcdf - Update BUILD_DEPENDS: remove redundant LOCALBASE/bin 2015-11-04 20:14:52 +00:00
netcdf-cxx - Use USES=localbase 2015-10-19 20:21:01 +00:00
netcdf-fortran - Use USES=localbase 2015-10-19 20:21:05 +00:00
nifticlib - Mark MAKE_JOBS_UNSAFE, fails in parallel build: 2015-11-05 10:55:19 +00:00
openbabel
openkim
orthanc Upgrade to upstream version 0.9.4 2015-09-28 13:38:59 +00:00
orthanc-dicomweb This plugin extends the RESTful API of Orthanc with WADO and DICOMweb 2015-10-06 15:54:48 +00:00
orthanc-postgresql - Update from 1.2 to 1.3, fix build 2015-10-07 13:02:02 +00:00
orthanc-webviewer
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea - Add NO_ARCH 2015-10-03 17:11:36 +00:00
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS - Update to 0.103 2015-10-10 00:11:24 +00:00
p5-PerlMol
p5-Physics-Unit Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
paje Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
paraview
pnetcdf - Update to 1.10.0 2015-09-17 02:58:01 +00:00
psychopy Remove ansi version fo wxGTK 2.8 and only keep the unicode version 2015-09-16 19:51:26 +00:00
pulseview
py-cdo - Update RUN_DEPENDS: remove redundant LOCALBASE/bin 2015-11-04 20:14:57 +00:00
py-coards
py-DendroPy
py-h5py
py-hcluster - Add LICENSE 2015-09-14 12:20:09 +00:00
py-mdp
py-mlpy
py-netCDF4
py-obspy - Update to 0.10.2 2015-09-13 07:02:47 +00:00
py-paida
py-pupynere
py-pyaixi
py-pydap
py-pydicom
py-pysal - Update to 1.10.0 2015-10-04 17:59:41 +00:00
py-pyteomics Rename my ports to comply with Python ports policy 2015-11-02 09:24:50 +00:00
py-pyteomics.biolccc Rename my ports to comply with Python ports policy 2015-11-02 09:24:50 +00:00
py-scikit-learn
py-scikit-sparse
py-scimath
py-scipy - Strip shared library 2015-10-09 18:33:04 +00:00
py-ws2300
pybrain
pycdf
pynn
qcl
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-snow
R-cran-som
rubygem-ai4r
rubygem-cdo - Add LICENSE_FILE 2015-11-04 20:15:00 +00:00
rubygem-ruby-dcl
rubygem-ruby-netcdf
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simlib
simsmith
step
svmlight
szip - Convert to new test framework 2015-10-01 15:56:21 +00:00
udunits - Update to 2.2.20 2015-10-27 15:50:25 +00:00
v_sim
veusz
vmd
voro++
xfce4-equake-plugin
xmakemol
Makefile Rename my ports to comply with Python ports policy 2015-11-02 09:24:50 +00:00