1
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mirror of https://git.FreeBSD.org/ports.git synced 2024-10-18 19:49:40 +00:00
freebsd-ports/science
2023-03-22 03:20:08 +08:00
..
2d-rewriter
abinit science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
afni science/afni: update to 23.0.08 2023-03-19 20:44:15 +01:00
agrum science/agrum: Update 1.3.1 -> 1.5.2 2023-01-14 17:28:09 -08:00
aircraft-datcom
ALPSCore
antioch
apbs
arbor science/{,py-}arbor: Update 0.8 -> 0.8.1 2022-12-24 03:06:21 -08:00
ascent science/ascent: Update 0.8.0 → 0.9.0 2023-01-30 23:55:16 -08:00
atompaw science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
avogadro2 science/avogadro2: Update WWW 2022-11-19 16:10:48 -08:00
avogadrolibs math/vtk9: Update 9.1.0 -> 9.2.2 2022-10-24 01:14:57 -07:00
axom
bagel */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
bddsolve */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
berkeleygw
bodr
bout++ science/PETSc: Change to 64-bit indices; Add METIS option 2023-02-12 20:26:37 -08:00
bout++-merging-filaments science/bout++-merging-filaments: New port: Simulation of reconnection during merging of current filaments 2022-12-24 17:22:59 -08:00
buddy
cantera science/*: Fix USES=octave for some ports 2022-12-30 13:00:08 -06:00
cardioid
cdcl science/*dcl: Reset EXPIRATION_DATE 2023-03-21 07:43:31 -05:00
cdf
cdk
cdo graphics/proj: Update to 9.2.0 2023-03-09 13:42:31 +01:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemicalfun science/chemicalfun: Update 0.1.7 → 0.1.8 2023-03-07 01:37:50 -08:00
chemps2
chemtool accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
chemtool-devel accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
chimes-calculator
ChipmunkPhysics
chrono science/chrono: Update 7.0.3 → 8.0.0 2023-01-27 07:40:52 -08:00
cif-tools science/cif-tools: Update 1.0.3 -> 1.0.7 2022-11-24 03:09:16 -08:00
clhep science/clhep: Update version 2.4.6.3=>2.4.6.4 2023-02-27 16:45:51 +01:00
clipper
code_saturne science/hypre: Update 2.26.0 → 2.28.0 2023-03-19 00:46:57 -07:00
colt
conduit
coordgenlibs science/coordgenlibs: Update 3.0.1 → 3.0.2 2023-02-05 13:04:12 -08:00
cp2k science/cp2k: Update 2022.1 -> 2022.2 2022-10-05 10:24:52 -07:00
cp2k-data science/cp2k-data: Update 2022.1 -> 2022.2 2022-10-05 15:33:11 -07:00
crf++
csvtk all: Bump PORTREVISION after Go ports update 2023-03-09 14:18:07 -05:00
dakota science/dakota: Update 6.16.0 -> 6.17.0 2023-01-21 09:08:59 -08:00
dalton science/dalton: Broken on armv7 2022-12-10 23:32:12 -08:00
dd_package science/dd_package: Update 2.1.0 → 2.2.0 2023-03-14 22:43:20 -07:00
devisor
dftbplus science/dftbplus: enable on 13 / powerpc{,64le} 2023-03-15 08:48:14 +00:00
dftd3 science/dftd3: New port: S. Grimme's dispersion correction for DFT, Hartree-Fock methods 2022-12-08 03:11:24 -08:00
dftd4 */*: Limit BROKEN statement for missing ieee_arithmetic.mod feature on powerpc64* 2022-12-20 23:13:58 -08:00
dimod science/dimod: Update 0.12.2 -> 0.12.3 2022-12-25 22:13:15 -08:00
dirac science/dirac: Broken on armv7 2022-11-27 02:17:18 -08:00
dkh science/dkh: fix build without libomp 2023-03-13 00:02:51 +00:00
dlib-cpp
drawxtl
dssp science/dssp: Update 4.0.5 -> 4.2.0 2022-11-24 03:09:17 -08:00
dvc */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
dwave-preprocessing
dynare math/suitesparse*: bump PORTREVISION of dependant ports 2023-01-19 17:45:37 +01:00
eccodes science/eccodes: Enable AEC option by default 2023-02-06 02:16:41 +08:00
elk science/elk: Update 8.6.7 -> 8.7.2 2023-01-09 23:59:55 -08:00
elmerfem cad/opencascade: bump PORTREVISION of consumers after upgrade to 7.7.0 2022-11-12 14:32:00 +01:00
epte
erd science/erd: fix build without libomp 2023-03-13 00:02:53 +00:00
ergo
erkale science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10 science/feff10: New port: Ab initio scattering calculations of X-ray absorption fine structure 2022-10-30 10:13:51 -07:00
fleur */*: Change DISTVERSION to have a hyphen when it refers to a specific revision 2022-12-01 10:42:20 -08:00
frontistr
fsom
fvcom
fvcom-mpi
gabedit accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
gamess-us
gbtolib
gchemutils accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
gdma science/gdma: fix build without libomp 2023-03-13 00:02:48 +00:00
geant4 science/geant4: adding Geant4, a TK for the simulation of the passage of particles through matter 2022-12-26 16:04:31 +01:00
gemmi science/gemmi: Update 0.5.8 → 0.6.0 2023-03-06 10:06:43 -08:00
getdp
ghemical accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
ghmm
gnudatalanguage graphics/proj: Update to 9.2.0 2023-03-09 13:42:31 +01:00
gpaw-setups
gramps accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
grib_api
gromacs science/gromacs: Update 2022.3 -> 2022.4 2022-12-25 23:19:03 -08:00
gsmc accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
gtamsanalyzer
h5utils science/h5utils: Adopt/Update to 1.13.2 2023-01-17 11:04:48 +00:00
h5z-zfp
harminv
hdf
hdf5 science/hdf5: Enable the FORTRAN option by default 2022-11-03 01:03:49 -07:00
hdf5-18 science/hdf5-18: upgrade to 1.8.23 2023-03-07 17:27:47 +01:00
hdf5-110
healpix astro/cfitsio: Update to 4.2.0 2022-12-30 17:04:05 +08:00
helfem science/helfem: PORTREVISION bump 2023-02-22 21:15:58 +01:00
hepmc3
highfive science/highfive: Update 2.6.1 -> 2.6.2 2022-11-22 14:05:34 -08:00
hypre science/hypre: Update 2.26.0 → 2.28.0 2023-03-19 00:46:57 -07:00
iboview
InsightToolkit science/InsightToolkit: Update 5.3rc04 -> 5.3.0 2022-12-31 10:04:35 -08:00
InsightToolkit501 science/InsightToolkit: Update 5.0.1 -> 5.2.1 2022-11-16 02:42:53 -08:00
isaac-cfd
jdftx science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
jmol science/jmol: Update 14.32.76 -> 14.32.79 2022-10-30 09:11:07 -07:00
jstrack science/jstrack: Fix MASTER_SITES 2022-12-23 21:01:44 -06:00
kalzium KDE: Update KDE Gear to 22.12.3 2023-03-04 00:22:11 +01:00
kim-api
kplib
kst2 astro/cfitsio: Update to 4.2.0 2022-12-30 17:04:05 +08:00
lammps science/lammps: fix LIB_DEPENDS 2023-01-10 22:49:44 +00:00
lamprop
latte
libaec
libccp4
libcifpp science/libcifpp: Not broken on i386 any more 2022-11-20 00:07:20 -08:00
libcint science/libcint: Update 5.1.6 -> 5.1.7 2022-12-09 00:47:30 -08:00
libctl
libecpint
libefp
libgeodecomp
libgetar
libghemical
libgridxc science/libgridxc: Update 0.9.6 -> 1.1.0; Add options for MPI choices 2023-01-04 14:12:02 -08:00
libint
libint2
libint2-psi4 science/libint2-psi4: New port: Evaluate the integrals in modern atomic and molecular theory (psi4) 2022-11-26 03:04:46 -08:00
libkml
liblinear science/liblinear: Update to 2.46 2023-03-22 03:20:08 +08:00
libmbd
libmsym
libnegf
liboglappth
libquantum
libssm
libsvm
libsvm-python
libtensorflow1
libvdwxc
libxc science/libxc: upgrade to libXC 6 2022-11-05 15:42:46 +01:00
liggghts */*: Remove stray files 2023-01-22 16:58:55 -08:00
linux-zotero
luscus accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
m-aneos science/m-aneos: New port: M-ANEOS: program for construction of thermodynamic equations of state 2022-12-10 01:51:02 -08:00
madness science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
maeparser science/maeparser: Update 1.3.0 → 1.3.1 2023-02-05 13:04:12 -08:00
massxpert science/massxpert: drop unused libpthread-stubs 2023-02-11 16:41:00 +01:00
mbdyn math/suitesparse*: bump PORTREVISION of dependant ports 2023-01-19 17:45:37 +01:00
mcstas
mcstas-comps
mctc-lib
mcxtrace
mcxtrace-comps
mdynamix science/mdynamix: drop BROKEN after 6855288383 2023-02-18 22:37:20 +00:00
medit
meep science/meep: Update 1.25.0 → 1.26.0 2023-03-11 01:50:37 -08:00
mercantile
metaphysicl
minc2
mmdb2
mmtf-cpp multiple: Fix msgpack cmake package name 2023-01-10 10:13:15 -07:00
mol2ps
molgif all: Bump PORTREVISION after Go ports update 2023-03-09 14:18:07 -05:00
molscript
molsketch science/molsketch: Update 0.7.2 -> 0.7.3 2022-09-26 19:49:03 -07:00
mopac science/mopac: Update 22.0.5 -> 22.0.6 2022-12-18 17:54:31 -08:00
mp2d science/mp2d: New port: Program for calculating the MP2D dispersion energy 2022-12-07 04:04:25 -08:00
mpb
mpqc Mk/**tex.mk: Convert bsd.tex.mk to USES=tex 2022-12-19 08:44:58 -06:00
mrchem science/{,py-}mrchem: Update 1.1.1 -> 1.1.2 2023-01-23 00:17:39 -08:00
mrcpp science/mrcpp: Update 1.4.1-20221026 -> 1.4.2 2023-01-23 00:17:38 -08:00
msms
mstore
multicharge
multiwfn
namd
nest
netcdf science/netcdf: Fix PLIST after d84d21b117 2023-02-06 00:09:51 +08:00
netcdf-cxx
netcdf-fortran
nifticlib
nlcglib
nwchem science/nwchem: Update 7.0.2-20220224 → 7.2.0 2023-03-13 11:51:36 -07:00
nwchem-data science/nwchem-data: Update 7.0.2 → 7.2.0 2023-03-13 11:51:36 -07:00
ocean science/ocean: New port: BSE code for core spectroscopy 2022-10-30 09:11:07 -07:00
octopus science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
openbabel science/openbabel: Remove PYTHON option 2022-11-20 13:50:01 -08:00
openems science/openems: Update 0.0.35-76 -> 0.0.35-97 2023-01-18 07:28:45 -08:00
openkim-models
openmc */*: chase the upgrade of devel/libfmt to 9.1.0 2022-12-19 10:31:34 +01:00
openmodelica science/openmodelica: Backport bug fix of improper cast from int to pointer 2023-02-25 12:31:58 -08:00
openmolcas science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
openmx
opensim-core
opensph *: Bump PORTREVISION of math/Imath users 2023-03-04 11:41:17 +01:00
opsin
orthanc */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
orthanc-dicomweb */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
orthanc-mysql */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
orthanc-postgresql */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
orthanc-webviewer */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc science/p5-Geo-Calc: Add new port 2022-11-21 20:37:54 +08:00
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform science/p5-Geo-Coordinates-Transform: Add p5-Geo-Coordinates-Transform 0.10 2022-12-30 17:04:00 +08:00
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2 devel/onetbb: Update to 2021.8.0 2023-03-03 16:01:50 +01:00
paje
paraview science/paraview: Unbreak build after math/exprtk update to 0.0.2 2023-03-19 22:09:08 -07:00
pastix science/pastix: upgrade to v6.2.2 and SPM to 1.1.1 2022-10-02 09:52:22 +02:00
pcmsolver
PETSc science/PETSc: Update 3.18.4 → 3.18.5 2023-03-01 01:01:21 -08:00
phonopy science/phonopy: fix build without libomp 2023-03-13 00:02:37 +00:00
plumed
pnetcdf
polytope science/polytope: Update 0.6.2-2 → 0.7.0 2023-01-25 21:57:04 -08:00
precice */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
psi4 science/psi4: Update 1.6.1-20221122 -> 1.7 2022-12-08 18:41:17 -08:00
pulseview
py-abipy
py-access */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-arbor science/{,py-}arbor: Update 0.8 -> 0.8.1 2022-12-24 03:06:21 -08:00
py-arch */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-asap3 */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-asdf science/py-asdf: Update to 2.14.3 2023-01-30 21:00:15 +08:00
py-asdf-standard */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-asdf-transform-schemas */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-asdf-unit-schemas science/py-asdf-unit-schemas: Add py-asdf-unit-schemas 0.1.0 2023-01-30 20:58:48 +08:00
py-ase */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-atomium science/py-atomium: New port: Molecular modeller and file parser 2022-10-03 21:06:22 -07:00
py-avogadrolibs science/py-avogadrolibs: Simplify patch 2022-11-19 16:10:49 -08:00
py-boutdata */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-boututils PyQt: Update to latest versions 2023-03-09 12:15:07 +01:00
py-cdo */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-cfgrib science/py-cfgrib: Add py-cfgrib 0.9.10.3 2023-02-05 23:47:39 +08:00
py-chainer */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-chainer-chemistry */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-chempy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-cirq-aqt science/py-cirq-*: Update 1.0.0 -> 1.1.0 2022-12-25 23:19:04 -08:00
py-cirq-core science/py-cirq-*: Update 1.0.0 -> 1.1.0 2022-12-25 23:19:04 -08:00
py-cirq-google science/py-cirq-*: Update 1.0.0 -> 1.1.0 2022-12-25 23:19:04 -08:00
py-cirq-ionq science/py-cirq-*: Update 1.0.0 -> 1.1.0 2022-12-25 23:19:04 -08:00
py-cirq-pasqal science/py-cirq-*: Update 1.0.0 -> 1.1.0 2022-12-25 23:19:04 -08:00
py-cirq-rigetti all: undeprecate www/py-pyjwt1 and consumers 2022-12-31 15:52:52 +01:00
py-coards */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-DendroPy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-dimod science/py-dimod: Update 0.12.3 → 0.12.4 2023-03-10 01:05:59 -08:00
py-dipy science/py-dipy: Update 1.5.0 -> 1.6.0 2023-01-18 18:47:12 -08:00
py-dlib
py-dwave-cloud-client science/py-dwave-cloud-client: Update 0.10.2 -> 0.10.4 2022-12-25 01:57:41 -08:00
py-dwave-greedy science/py-dwave-greedy: Update 0.2.5 -> 0.3.0 2022-12-25 01:57:40 -08:00
py-dwave-hybrid science/py-dwave-hybrid: Update 0.6.9 -> 0.6.10 2022-12-25 01:57:44 -08:00
py-dwave-inspector science/py-dwave-inspector: Update 0.3.0 -> 0.4.0 2022-12-25 01:57:45 -08:00
py-dwave-neal */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-dwave-networkx science/py-dwave-networkx: Update 0.8.12 -> 0.8.13 2022-12-24 17:22:58 -08:00
py-dwave-ocean-sdk science/py-dwave-ocean-sdk: Update 5.5.0 -> 6.2.0 2022-12-25 01:57:47 -08:00
py-dwave-preprocessing science/py-dwave-preprocessing: Update 0.5.2 -> 0.5.4 2022-12-25 01:57:43 -08:00
py-dwave-samplers science/py-dwave-samplers: Update 1.0.0.dev2 -> 1.0.0 2022-12-25 01:57:39 -08:00
py-dwave-system science/py-dwave-system: Update 1.16.0 -> 1.18.0 2022-12-25 01:57:43 -08:00
py-dwave-tabu */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-dwavebinarycsp
py-earthpy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-eccodes science/py-eccodes: Update to 1.5.1 2023-02-05 23:48:04 +08:00
py-esda */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-fresnel devel/onetbb: Update to 2021.8.0 2023-03-03 16:01:50 +01:00
py-gemmi science/py-gemmi: Update 0.5.8 → 0.6.0 2023-03-08 03:41:47 -08:00
py-geolinks */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-geomet */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-geometer science/py-geometer: Fix build with numpy-1.24 2023-02-08 09:26:43 +08:00
py-geometric */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-gpaw */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-GPy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-GPyOpt */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-gsd */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-h5json */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-h5py science/py-h5py: Update to 3.8.0 2023-02-05 23:48:04 +08:00
py-hiphive */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-hoomd-blue science/py-hoomd-blue: Update 3.8.1 → 3.10.0 2023-03-17 10:43:13 -07:00
py-inequality */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-ipygany */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-jupyter_jsmol devel/py-ipykernel5: Remove in favor of devel/py-ipykernel 2022-10-15 09:47:12 -07:00
py-kim-query */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-kimpy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-kinematics */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-kliff */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-kpLib */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-liac-arff */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-libgetar
py-libpysal */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-lifelines */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-MDAnalysis */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-MDAnalysisTests */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-mdp
py-meshio */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-mmcif */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-mmtf-python science/py-mmtf-python: Update 1.1.2 -> 1.1.3 2022-09-29 20:25:04 -07:00
py-molmod */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-moltemplate science/py-moltemplate: Update 2.20.15 -> 2.20.17 2022-12-04 13:17:44 -08:00
py-mrchem science/{,py-}mrchem: Update 1.1.1 -> 1.1.2 2023-01-23 00:17:39 -08:00
py-netCDF4 science/py-netCDF4: Update version 1.6.2=>1.6.3 2023-03-11 10:07:43 -06:00
py-netcdf-flattener */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-nibabel */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-nilearn */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-obspy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-oddt
py-openbabel */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-OpenFermion
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking science/py-optking: New port: Python version of the PSI4 geometry optimization program by R.A. King 2022-12-08 03:11:24 -08:00
py-paida
py-paramz */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-penaltymodel
py-phono3py */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-phonopy science/phonopy: Update 2.16.3 → 2.17.2 2023-03-08 01:04:44 -08:00
py-PubChemPy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pupynere */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-py3Dmol */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pyaixi */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pyberny */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pycsw */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pydicom science/py-pydicom: Update to 2.3.1 2022-12-22 16:34:52 +08:00
py-PyFR */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pygeodesy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pygeometa */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pygmo2
py-pyked */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pymatgen */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pymbd
py-pymol science/py-pymol: Update 2.4.0 -> 2.5.0-97 2022-11-27 13:03:05 -08:00
py-PyNE science/py-PyNE: Correct MASTER_SITES URLs & add comment 2022-12-13 19:19:45 -08:00
py-pyosf
py-pyprecice
py-pyqubo science/py-pyqubo: Update 1.3.0 -> 1.4.0 2022-12-25 01:57:45 -08:00
py-pysal */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-pyscf science/py-pyscf: Update 2.1.1 → 2.2.0 2023-03-18 00:52:18 -07:00
py-pyteomics */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-qcelemental */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-qcengine */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-qiskit
py-qiskit-aer */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-qiskit-experiments
py-qiskit-finance
py-qiskit-ibm-experiment */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-qiskit-ibm-provider
py-qiskit-ibmq-provider
py-qiskit-nature science/py-qiskit-nature: Update 0.4.4 -> 0.4.5 2022-09-24 12:18:36 -07:00
py-qiskit-optimization science/py-qiskit-optimization: Update 0.4.0-3 → 0.5.0 2023-01-30 07:10:38 -08:00
py-qiskit-terra lang/rust: Bump revisions after 1.68.0 2023-03-16 12:11:52 +01:00
py-qspin */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-quantities */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-rmf science/{,py-}rmf: Update 1.4 -> 1.4.1 2022-12-25 22:13:14 -08:00
py-rmsd */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-ruffus */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-scikit-fuzzy */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-scikit-learn science/py-scikit-learn: Update to 1.2.2 2023-03-12 16:06:32 +08:00
py-scikit-optimize */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-scikit-sparse math/suitesparse*: bump PORTREVISION of dependant ports 2023-01-19 17:45:37 +01:00
py-scimath */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-scipy science/py-scipy: Update to 1.10.0 2023-02-13 19:21:40 +08:00
py-scoria */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-sdf science/py-sdf: add a simple SDF mesh generator 2022-11-19 17:35:41 +01:00
py-segregation */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-segyio
py-SimpleSpectral */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-sklearn-pandas */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-skrebate */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-spaghetti */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-spglib science/{,py-}spglib: Update 2.0.1 → 2.0.2 2023-01-28 09:16:32 -08:00
py-tensorflow devel/grpc: Update to 1.52.1 2023-03-22 03:20:03 +08:00
py-thewalrus science/py-thewalrus: Update 0.19.0 → 0.20.0 2023-03-09 08:33:50 -08:00
py-tobler */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-trainstation */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
py-tweedledum
py-vedo science/py-vedo: Update 2023.4.3 → 2023.4.4 2023-03-18 00:52:18 -07:00
py-veusz PyQt: Update to latest versions 2023-03-09 12:15:07 +01:00
py-xbout science/py-xbout: Update 0.3.3 -> 0.3.5 2023-01-21 09:08:59 -08:00
pybrain
pynn */*: rename CHEESESHOP to PYPI in MASTER_SITES 2023-01-11 18:58:34 +03:00
q
qbox science/qbox: Update 1_75_0 → 1_75_1 2023-02-27 19:23:09 -08:00
qcl
qiskit-aer */*: chase the upgrade of devel/libfmt to 9.1.0 2022-12-19 10:31:34 +01:00
qmcpack science/qmcpack: Update 3.14.0 -> 3.15.0 2022-10-09 10:40:41 -07:00
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet
qwalk
R-cran-bayesm science/R-cran-bayesm: Update to 3.1.5 2022-12-22 22:09:10 +08:00
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks science/R-cran-ks: upgrade to 1.14.0 2022-11-25 17:13:03 +01:00
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
rmf */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
rubygem-ai4r Mk/**ruby.mk: Switch from USE_RUBY=yes to USES=ruby 2023-01-14 17:08:33 -06:00
rubygem-cdo Mk/**ruby.mk: Switch from USE_RUBY=yes to USES=ruby 2023-01-14 17:08:33 -06:00
rubygem-rgeo science/rubygem-rgeo: Update to 3.0.0 2023-02-05 23:49:49 +08:00
rubygem-rgeo-geojson Mk/**ruby.mk: Switch from USE_RUBY=yes to USES=ruby 2023-01-14 17:08:33 -06:00
rubygem-rgeo-proj4 graphics/proj: Update to 9.2.0 2023-03-09 13:42:31 +01:00
rubygem-rgeo-shapefile Mk/**ruby.mk: Switch from USE_RUBY=yes to USES=ruby 2023-01-14 17:08:33 -06:00
rubygem-ruby-dcl science/*dcl: Reset EXPIRATION_DATE 2023-03-21 07:43:31 -05:00
rubygem-ruby-netcdf Mk/**ruby.mk: Switch from USE_RUBY=yes to USES=ruby 2023-01-14 17:08:33 -06:00
scidavis
sciplot graphics/sciplot: Move to science/sciplot 2022-11-15 23:33:04 -08:00
segyio
serac science/hypre: Update 2.26.0 → 2.28.0 2023-03-19 00:46:57 -07:00
shelxle science/shelxle: Update 1.0.1428 -> 1.0.1432 2022-09-22 08:40:12 -07:00
siconos math/suitesparse*: bump PORTREVISION of dependant ports 2023-01-19 17:45:37 +01:00
siesta science/siesta: enable on 13 / powerpc{,64le} 2023-03-15 08:48:15 +00:00
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo science/silo: fix build with clang 15 2023-01-10 19:26:30 +01:00
simbody
simgrid science/simgrid: Fix tests 2023-02-24 00:25:17 -08:00
simint
simlib
simple-dftd3
simsmith
sirius science/*: bump PORTREVISION in consumers of libXC 2022-11-05 15:47:18 +01:00
smoldyn science/smoldyn: Update 2.68 -> 2.69; Fix tests 2022-10-20 13:31:39 -07:00
sparta
spglib science/{,py-}spglib: Update 2.0.1 → 2.0.2 2023-01-28 09:16:32 -08:00
spheral science/spheral: New port: Environment for hydrodynamical & gravitational numerical simulations 2022-12-10 16:44:11 -08:00
step KDE: Update KDE Gear to 22.12.3 2023-03-04 00:22:11 +01:00
svmlight
tblite
teem
tfel
tfel-edf
thermofun science/thermofun: Update 0.4.1 → 0.4.3 2023-03-07 01:37:50 -08:00
tinker
trilinos math/suitesparse*: bump PORTREVISION of dependant ports 2023-01-19 17:45:37 +01:00
ttk science/ttk: Unbreak by adding nlohmann-json build-time dependency 2022-11-21 10:59:50 -08:00
tweedledum
udunits
ukrmol+
v_sim accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
vipster
vmd science/vmd: Add another alternate MASTER_SITE for tachyon 2023-01-06 17:57:54 -06:00
voro++
votca */*: bump libboost*.so libraries consumert after Boost upgrade 2023-01-16 22:32:07 +03:00
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem
xtb science/xtb: Update 6.4.1 -> 6.5.1; Add tests 2022-11-14 19:06:49 -08:00
yoda
zotero accessibility/at-spi2-core: update to 2.46.0 2023-03-02 06:23:10 +01:00
zx science/zx: New port: MQT ZX: A library for working with ZX-diagrams 2022-11-02 09:22:57 -07:00
Makefile science/InsightToolkit521: Retire if favor of science/InsightToolkit 2023-03-21 08:12:22 -07:00