| .. |
|
act
|
|
|
|
ariadne
|
Add ariadne 1.3, programs to compare protein sequences and
|
2004-06-22 14:29:59 +00:00 |
|
artemis
|
|
|
|
avida
|
The build should be fixed now, so remove BROKEN mark.
|
2004-09-23 07:10:32 +00:00 |
|
babel
|
|
|
|
biojava
|
|
|
|
chemeq
|
|
|
|
clustalw
|
|
|
|
coalesce
|
|
|
|
crimap
|
|
|
|
deft
|
BROKEN on 5.x: Does not install
|
2004-09-18 16:35:47 +00:00 |
|
distribfold
|
Drop maintainership
|
2004-06-24 14:28:12 +00:00 |
|
dna-qc
|
|
|
|
emboss
|
Fix MASTER_SITES:
|
2004-06-23 08:20:21 +00:00 |
|
fasta
|
Update to fix fetch. Rework PORTVERSION to be more like biology/fasta3
|
2004-07-01 06:24:01 +00:00 |
|
fasta3
|
Chase mastersite and fix checksum to unbreak. (Changes are inclusion of a
|
2004-07-01 03:02:23 +00:00 |
|
fastdnaml
|
|
|
|
flip
|
|
|
|
fluctuate
|
|
|
|
garlic
|
|
|
|
genpak
|
|
|
|
gff2ps
|
|
|
|
gperiodic
|
|
|
|
grappa
|
This is now buildable on 5.x, remove BROKEN.
|
2004-08-17 10:29:40 +00:00 |
|
hmmer
|
|
|
|
kinemage
|
|
|
|
L-Breeder
|
|
|
|
lamarc
|
|
|
|
libgenome
|
Apply a big libtool patch to allow porters to use the libtool installed by
|
2004-07-09 17:43:11 +00:00 |
|
lsysexp
|
biology/lsysexp is not broken
|
2004-08-18 01:47:39 +00:00 |
|
migrate
|
Update to 1.7.6.1.
|
2004-06-30 06:55:56 +00:00 |
|
molden
|
|
|
|
mopac
|
BROKEN on 5.x: Does not install
|
2004-09-19 01:18:56 +00:00 |
|
nab
|
Now installs on FreeBSD 5.x.
|
2004-10-28 21:01:05 +00:00 |
|
ncbi-toolkit
|
|
|
|
nclever
|
|
|
|
ortep3
|
|
|
|
p5-AcePerl
|
|
|
|
p5-bioperl
|
- add missing MAN1 and MAN3
|
2004-09-03 17:04:38 +00:00 |
|
paml
|
|
|
|
phylip
|
- Update to 3.62
|
2004-10-11 22:26:34 +00:00 |
|
platon
|
|
|
|
povchem
|
|
|
|
primer3
|
|
|
|
psi88
|
|
|
|
py-biopython
|
- Update to 1.30
|
2004-10-27 20:39:17 +00:00 |
|
pymol
|
Avoid the use of != statements in ports Makefile
|
2004-10-24 03:37:02 +00:00 |
|
rasmol
|
Update to version 2.7.2.1.1
|
2004-07-09 18:01:11 +00:00 |
|
recombine
|
|
|
|
ruby-bio
|
Fix distsite
|
2004-07-06 14:31:55 +00:00 |
|
seaview
|
|
|
|
seqio
|
|
|
|
sim4
|
|
|
|
spdbv
|
|
|
|
t_coffee
|
|
|
|
tinker
|
Upgrade to latest revision to make fetchable again.
|
2004-09-25 08:06:08 +00:00 |
|
treepuzzle
|
- Update to 5.2
|
2004-07-30 22:02:00 +00:00 |
|
treeviewx
|
BROKEN on 5.x: Does not compile
|
2004-09-29 05:45:34 +00:00 |
|
tRNAscan-SE
|
|
|
|
wise
|
|
|
|
xdrawchem
|
|
|
|
xmolwt
|
|
|
|
Makefile
|
Add ariadne 1.3, programs to compare protein sequences and
|
2004-06-22 14:29:59 +00:00 |
