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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-29 01:13:08 +00:00
freebsd-ports/science
Ashish SHUKLA 441f2bbcb5 - Update to 0.5.0.1
Obtained from:	FreeBSD Haskell
2011-07-10 01:03:33 +00:00
..
2d-rewriter - remove MD5 2011-07-03 13:22:24 +00:00
2dhf - remove MD5 2011-07-03 13:22:24 +00:00
abinit - remove MD5 2011-07-03 13:22:24 +00:00
afni - remove MD5 2011-07-03 13:22:24 +00:00
at - remove MD5 2011-07-03 13:22:24 +00:00
avogadro - remove MD5 2011-07-03 13:22:24 +00:00
bblimage Update to 0.72, follow upstream name change, and clean up 2011-07-01 10:46:10 +00:00
bddsolve - remove MD5 2011-07-03 13:22:24 +00:00
bft - remove MD5 2011-07-03 13:22:24 +00:00
bodr - remove MD5 2011-07-03 13:22:24 +00:00
brian - Update to 1.3.0 2011-02-21 00:25:05 +00:00
buddy - remove MD5 2011-07-03 13:22:24 +00:00
cdcl - remove MD5 2011-07-03 13:22:24 +00:00
cdf - remove MD5 2011-07-03 13:22:24 +00:00
cdo - Update to 1.5.0 2011-04-12 15:17:01 +00:00
cgnslib - Upgrade to 2.5-5. 2011-02-26 10:23:14 +00:00
checkmol - remove MD5 2011-07-03 13:22:24 +00:00
chemical-mime-data - remove MD5 2011-07-03 13:22:24 +00:00
chemtool - remove MD5 2011-07-03 13:22:24 +00:00
chemtool-devel - remove MD5 2011-07-03 13:22:24 +00:00
clhep - remove MD5 2011-07-03 13:22:24 +00:00
colt - Fix fetch error 2011-01-16 01:37:19 +00:00
crf++ - remove MD5 2011-07-03 13:22:24 +00:00
dcl - remove MD5 2011-07-03 13:22:24 +00:00
devisor - remove MD5 2011-07-03 13:22:24 +00:00
dtiquery - remove MD5 2011-07-03 13:22:24 +00:00
ecs Chase the upgrade of science/cgnslib to 2.5-5; this implies to 2011-02-26 10:23:19 +00:00
elmer-eio - remove MD5 2011-07-03 13:22:24 +00:00
elmer-hutiter - Fixed fetch of port 2011-02-28 13:46:36 +00:00
elmer-matc - remove MD5 2011-07-03 13:22:24 +00:00
elmer-meshgen2d - remove MD5 2011-07-03 13:22:24 +00:00
elmergrid - remove MD5 2011-07-03 13:22:24 +00:00
elmerpost - remove MD5 2011-07-03 13:22:24 +00:00
epte - remove MD5 2011-07-03 13:22:24 +00:00
euler - remove MD5 2011-07-03 13:22:24 +00:00
fastcap update to 2.0wr-011109 and adopt 2011-03-31 16:20:14 +00:00
fasthenry update to 3.0wr-011109 and adopt 2011-03-31 16:03:03 +00:00
felt - remove MD5 2011-07-03 13:22:24 +00:00
flounder - remove MD5 2011-07-03 13:22:24 +00:00
fvm Fix the previous commit. 2011-03-01 17:59:32 +00:00
g3data - remove MD5 2011-07-03 13:22:24 +00:00
gamess - remove MD5 2011-07-03 13:22:24 +00:00
gave - remove MD5 2011-07-03 13:22:24 +00:00
gchemutils Chase goffice and gnumeric update. 2011-06-23 18:35:22 +00:00
gdis - remove MD5 2011-07-03 13:22:24 +00:00
gerris - remove MD5 2011-07-03 13:22:24 +00:00
getdp - remove MD5 2011-07-03 13:22:24 +00:00
ghemical - remove MD5 2011-07-03 13:22:24 +00:00
ghmm - remove MD5 2011-07-03 13:22:24 +00:00
gnudatalanguage Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
gramps
gromacs Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
gsmc - remove MD5 2011-07-03 13:22:24 +00:00
gsystem - remove MD5 2011-07-03 13:22:24 +00:00
gtamsanalyzer - drop MD5 2011-04-07 18:26:01 +00:00
gwyddion - remove MD5 2011-07-03 13:22:24 +00:00
h5utils h5utils is a set of utilities for visualization and conversion of 2011-03-18 19:42:35 +00:00
harminv - remove MD5 2011-07-03 13:22:24 +00:00
hdf - remove MD5 2011-07-03 13:22:24 +00:00
hdf5 - remove MD5 2011-07-03 13:22:24 +00:00
hdf5-18 - Update to 1.8.6 2011-03-12 10:07:53 +00:00
hdf-java Update to 2.7 2011-03-17 17:24:59 +00:00
hs-bio - Update to 0.5.0.1 2011-07-10 01:03:33 +00:00
ics - remove MD5 2011-07-03 13:22:24 +00:00
InsightToolkit - remove MD5 2011-07-03 13:22:24 +00:00
isaac-cfd - remove MD5 2011-07-03 13:22:24 +00:00
jmol - remove MD5 2011-07-03 13:22:24 +00:00
jstrack - remove MD5 2011-07-03 13:22:24 +00:00
kmovisto - remove MD5 2011-07-03 13:22:24 +00:00
kst Drop maintainership (I don't use Qt3 ports anymore) 2011-07-07 17:34:13 +00:00
kst2 Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
lamprop - Update to 1.3.3 2011-06-23 10:17:37 +00:00
libctl - remove MD5 2011-07-03 13:22:24 +00:00
libghemical - remove MD5 2011-07-03 13:22:24 +00:00
libint - remove MD5 2011-07-03 13:22:24 +00:00
libkml - remove MD5 2011-07-03 13:22:24 +00:00
liblinear - Update to 1.8 2011-05-02 12:19:32 +00:00
liboglappth - remove MD5 2011-07-03 13:22:24 +00:00
libquantum - remove MD5 2011-07-03 13:22:24 +00:00
libsvm - Update to 3.1 [1] 2011-04-24 04:30:35 +00:00
libsvm-python
linsmith - Update to 0.99.21 2011-03-27 17:13:49 +00:00
massxpert - Update to 2.4.3 2011-03-31 06:51:37 +00:00
mayavi - Fix Coredump 2011-03-18 09:59:55 +00:00
mbdyn - Chase ginac shlib bump 2011-03-04 14:08:57 +00:00
mcstas - remove MD5 2011-07-03 13:22:24 +00:00
medit Upgrade to 2011.03.06. 2011-03-07 20:59:00 +00:00
meep - Add optional dependency net/openmpi 2011-06-21 02:19:07 +00:00
minc - remove MD5 2011-07-03 13:22:24 +00:00
minc2 - remove MD5 2011-07-03 13:22:24 +00:00
mol2ps - remove MD5 2011-07-03 13:22:24 +00:00
mpb - remove MD5 2011-07-03 13:22:24 +00:00
mpqc Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
mpqc-mpich
ncs Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
netcdf - Use bsd.port.options.mk 2011-04-12 15:17:09 +00:00
netcdf3-ftn
netcdf4 - Revert devel/hdf5-18 shlib version back to 6 as hdf5 1.8.7 (ports/158394) is not committed yet 2011-06-29 01:23:27 +00:00
netcdf-ftn
nifticlib - remove MD5 2011-07-03 13:22:24 +00:00
omnetpp - remove MD5 2011-07-03 13:22:24 +00:00
openbabel - remove MD5 2011-07-03 13:22:24 +00:00
ovt - remove MD5 2011-07-03 13:22:24 +00:00
p5-Algorithm-SVMLight - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-3DBuilder - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Bond-Find - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Canonicalize - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Elements - Cleaning MD5 in perl@'s ports 2011-05-17 11:14:02 +00:00
p5-Chemistry-File-MDLMol - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-Mopac - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-PDB - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-File-SLN - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-SMARTS - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-SMILES - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-VRML - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-XYZ - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-FormulaPattern - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-InternalCoords - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Isotope - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-MacroMol - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-MidasPattern - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Mok - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Mol - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-Pattern - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Reaction - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Ring - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Geo-BUFR BUFR = Binary Universal Form for the Representation of meteorological data. 2011-03-10 06:15:55 +00:00
p5-Geo-Coordinates-Converter - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Geo-Coordinates-Converter-iArea - Add p5-Geo-Coordinates-Converter-iArea 0.14 2011-06-12 16:18:59 +00:00
p5-Geo-ReadGRIB - remove MD5 2011-07-03 13:22:24 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.007 2011-06-12 16:29:21 +00:00
p5-PerlMol - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Physics-Unit - remove MD5 2011-07-03 13:22:24 +00:00
paje - drop MD5 2011-04-07 18:26:01 +00:00
paraview CMAKE_BUILD_TYPE is set in bsd.cmake.mk now, remove it from Makefiles 2011-04-10 08:48:14 +00:00
peekabot Return these ports to the pool. 2011-03-02 23:59:52 +00:00
pnetcdf Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
psi3 - remove MD5 2011-07-03 13:22:24 +00:00
psychopy - Update to 1.65.00 2011-07-05 00:47:55 +00:00
py-biolccc Update to 1.3.0 2011-03-10 17:01:09 +00:00
py-DendroPy - Update to 3.8.1 2011-06-16 08:07:58 +00:00
py-h5py - remove MD5 2011-07-03 13:22:24 +00:00
py-hcluster - remove MD5 2011-07-03 13:22:24 +00:00
py-mdp - Move to py25 or above 2011-02-25 00:47:51 +00:00
py-mlpy Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
py-netCDF4 - Update to 0.9.4 2011-06-03 01:25:30 +00:00
py-obspy-core - Update to 0.4.8 2011-06-29 01:10:17 +00:00
py-obspy.gse2 - Update to 0.4.8 2011-06-29 01:17:16 +00:00
py-obspy.imaging obspy.imaging provides tools for displaying features used in seismology. 2011-06-29 08:18:07 +00:00
py-obspy.mseed - Update to 0.4.9 2011-06-29 01:14:41 +00:00
py-obspy.signal - Update to 0.4.9 2011-06-29 01:14:41 +00:00
py-obspy.wav The obspy.wav package contains methods in order to read and write 2011-03-21 06:28:57 +00:00
py-obspy.xseed The obspy.xseed package contains methods in order to read, write and 2011-06-29 08:13:17 +00:00
py-openbabel - remove MD5 2011-07-03 13:22:24 +00:00
py-paida - remove MD5 2011-07-03 13:22:24 +00:00
py-pydicom - remove MD5 2011-07-03 13:22:24 +00:00
py-scimath - Fix fetch 2011-02-22 01:15:35 +00:00
py-scipy - Move to py25 or above 2011-02-25 00:47:51 +00:00
py-ws2300 - New port science/py-ws2300 2011-07-01 20:23:41 +00:00
pybrain - remove MD5 2011-07-03 13:22:24 +00:00
pycdf - remove MD5 2011-07-03 13:22:24 +00:00
pynn - remove MD5 2011-07-03 13:22:24 +00:00
pyvox Update to 0.72, follow upstream name change, and clean up 2011-07-01 10:46:10 +00:00
qcl - remove MD5 2011-07-03 13:22:24 +00:00
qtresistors - remove MD5 2011-07-03 13:22:24 +00:00
R-cran-AMORE - update to 2.13.0 2011-05-07 03:29:59 +00:00
R-cran-bayesm - update to 2.13.0 2011-05-07 03:29:59 +00:00
ruby-dcl - remove MD5 2011-07-03 13:22:24 +00:00
ruby-gphys - remove MD5 2011-07-03 13:22:24 +00:00
ruby-netcdf - Update to 0.6.5 2011-02-20 11:31:04 +00:00
rubygem-ai4r - Cannoicalize the WWW: [again], 2011-06-23 17:51:43 +00:00
silo - remove MD5 2011-07-03 13:22:24 +00:00
simlib - remove MD5 2011-07-03 13:22:24 +00:00
svmlight Fix fetch. 2011-07-08 04:07:55 +00:00
szip - remove MD5 2011-07-03 13:22:24 +00:00
udunits - Update to 2.1.23 2011-05-25 14:38:41 +00:00
v_sim
veusz - Move to py25 or above 2011-02-25 00:47:51 +00:00
vis5d+ - remove MD5 2011-07-03 13:22:24 +00:00
vmd - Add files/patch-bin_vmd.csh, files/patch-bin_vmd.sh 2010-12-18 09:24:21 +00:00
x11iraf - remove MD5 2011-07-03 13:22:24 +00:00
xmakemol - remove MD5 2011-07-03 13:22:24 +00:00
xmds - remove MD5 2011-07-03 13:22:24 +00:00
Makefile - New port science/py-ws2300 2011-07-01 20:23:41 +00:00