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16 lines
890 B
Plaintext
16 lines
890 B
Plaintext
LocARNA is a collection of alignment tools for the structural analysis of RNA.
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Given a set of RNA sequences, LocARNA simultaneously aligns and predicts common
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structures for your RNAs. In this way, LocARNA performs Sankoff-like alignment
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and is in particular suited for analyzing sets of related RNAs without known
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common structure.
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LocARNA distinguishes itself from many other Sankoff-style multiple alignment
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programs by its performance and low memory complexity, high accuracy, and
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richness of features. As unique features, it offers structure-local alignment,
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flexible structure and anchor constraints, and provides efficient computation of
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reliabilities in sequence-structure alignment. The package offers a robust core
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of features and is used as experimental platform for the incorporation of new
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features in RNA sequence-structure alignment.
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WWW: https://github.com/s-will/LocARNA
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