Baptiste Daroussin 5b4f8f3bbd Convert to USES=imake ... Trim headers		2013-06-28 18:32:25 +00:00
..
adun
ariadne	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 14:10:02 +00:00
artemis
avida
babel	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 19:01:47 +00:00
biococoa
biojava
blast
blat	. remove pkg-plist (along with the previous commit).	2013-06-19 18:44:32 +00:00
boinc-simap
chemeq	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 20:01:30 +00:00
clustalw
consed
crux
dotter
embassy
emboss
fasta	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 18:51:16 +00:00
fasta3
fastdnaml	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 13:35:55 +00:00
finchtv
fluctuate
garlic
genpak
gff2ps	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 18:56:37 +00:00
gmap
gperiodic	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 19:05:47 +00:00
grappa
hmmer
iolib
jalview
lagan
lamarc	. trim Makefile headers;	2013-06-19 15:39:18 +00:00
libgenome	. add license (GPLv2);	2013-06-19 18:53:54 +00:00
libsbml
linux-foldingathome
mafft
mapm3
migrate
molden
mopac	. NOPORTEXAMPLES -> PORT_OPTIONS:MEXAMPLES;	2013-06-19 18:38:46 +00:00
mrbayes
mummer
muscle
ncbi-toolkit
njplot
ortep3	. introdice optionsNG to the port;	2013-06-19 20:06:59 +00:00
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl
p5-bioperl-run
paml
phd2fasta
phrap
phred
phylip	Fix some screw ups introduced in r319847.	2013-06-24 18:09:52 +00:00
phyml
platon
plink
plinkseq
povchem
primer3
protomol
psi88	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 19:54:13 +00:00
py-biopython
pycogent
pyfasta
pymol
python-nexus
rasmol	Convert to USES=imake	2013-06-28 18:32:25 +00:00
recombine	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 19:15:14 +00:00
ruby-bio
seaview
seqan
seqio	Remove stale (since r321246) pkg-plist file.	2013-06-19 21:04:36 +00:00
sim4	. add license (GPLv2);	2013-06-19 16:36:53 +00:00
ssaha
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE	. NOPORTDOCS -> PORT_OPTIONS:MDOCS;	2013-06-19 19:20:25 +00:00
ugene
velvet
wise
xdrawchem
xmolwt	Use optionsNG for DOCS.	2013-06-19 19:07:35 +00:00
Makefile