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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-23 04:23:08 +00:00
freebsd-ports/biology
Mathieu Arnold 33ab73cd19 Fix old makeplist bug.
Pointy hat to:	people who blindly use makeplist
Sponsored by:	Absolight
2014-02-12 14:03:25 +00:00
..
ariadne
artemis
avida
babel
biococoa
biojava According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
blast
blat
boinc-simap Drop maintainership BOINC ports, old machine running them gave up. 2014-02-04 17:54:29 +00:00
chemeq
clustalw
consed According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
crux
embassy
emboss
fasta
fasta3
fastdnaml
finchtv According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
fluctuate
garlic
genpak According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview
lagan
lamarc
libgenome biology/libgenome: Fix build on dragonfly 2014-02-05 23:47:48 +00:00
libsbml
linux-foldingathome
mafft
mapm3
migrate - Stagify; cleanup Makefile and reorder the knobs a bit 2014-01-29 12:08:29 +00:00
molden
mopac
mrbayes
mummer According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
muscle
ncbi-toolkit
njplot According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
ortep3
p5-AcePerl - Stage support 2014-02-10 06:56:52 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite - fix pkg-plist 2014-01-30 07:34:25 +00:00
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS - Stage support 2014-01-31 12:47:06 +00:00
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
p5-bioperl-run According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
paml According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
phd2fasta
phrap
phred
phylip
phyml - Stage support 2014-01-31 12:32:55 +00:00
platon
plink
plinkseq - Stage support 2014-01-31 12:33:11 +00:00
povchem
primer3
protomol
psi88
py-biopython
pycogent
pyfasta - Convert to PYDISTUTILS_AUTOPLIST 2014-01-31 12:31:24 +00:00
pymol
python-nexus - Convert to PYDISTUTILS_AUTOPLIST 2014-01-31 12:30:39 +00:00
rasmol
recombine
ruby-bio
seaview
seqan
seqio
seqtools Fix old makeplist bug. 2014-02-12 14:03:25 +00:00
sim4
ssaha Deprecate ports unmaintained for which distillator is not able to find public distfiles 2014-02-07 18:50:30 +00:00
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE biology/tRNAscan-SE: Fix hardcoded perl path 2014-02-05 23:44:50 +00:00
ugene Unbreak the fetch: one of the documentation PDF files was rerolled. 2014-01-30 13:38:26 +00:00
velvet According to the Porter's Handbook (5.12.2.3.) default options must be added to 2014-02-10 13:54:26 +00:00
wise biology/wise: Add dragonfly support 2014-02-05 23:42:06 +00:00
xmolwt
Makefile