mirror of
https://git.FreeBSD.org/ports.git
synced 2024-12-02 01:20:54 +00:00
b8b592e17b
Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. WWW: http://bowtie-bio.sourceforge.net/index.shtml PR: 206939 Submitted by: Jason Bacon <bacon4000@gmail.com>
104 lines
2.2 KiB
Makefile
104 lines
2.2 KiB
Makefile
# $FreeBSD$
|
|
#
|
|
|
|
COMMENT = Biology
|
|
|
|
SUBDIR += ariadne
|
|
SUBDIR += artemis
|
|
SUBDIR += avida
|
|
SUBDIR += babel
|
|
SUBDIR += bcftools
|
|
SUBDIR += bedtools
|
|
SUBDIR += biococoa
|
|
SUBDIR += biojava
|
|
SUBDIR += blat
|
|
SUBDIR += bowtie
|
|
SUBDIR += bwa
|
|
SUBDIR += cd-hit
|
|
SUBDIR += cdbfasta
|
|
SUBDIR += chemeq
|
|
SUBDIR += clustalw
|
|
SUBDIR += consed
|
|
SUBDIR += crux
|
|
SUBDIR += emboss
|
|
SUBDIR += fasta
|
|
SUBDIR += fasta3
|
|
SUBDIR += fastdnaml
|
|
SUBDIR += fastool
|
|
SUBDIR += fasttree
|
|
SUBDIR += fastx-toolkit
|
|
SUBDIR += fluctuate
|
|
SUBDIR += garlic
|
|
SUBDIR += gff2ps
|
|
SUBDIR += gmap
|
|
SUBDIR += gperiodic
|
|
SUBDIR += grappa
|
|
SUBDIR += hmmer
|
|
SUBDIR += htslib
|
|
SUBDIR += iolib
|
|
SUBDIR += jalview
|
|
SUBDIR += lagan
|
|
SUBDIR += lamarc
|
|
SUBDIR += libgtextutils
|
|
SUBDIR += libsbml
|
|
SUBDIR += linux-foldingathome
|
|
SUBDIR += mafft
|
|
SUBDIR += mapm3
|
|
SUBDIR += migrate
|
|
SUBDIR += molden
|
|
SUBDIR += mopac
|
|
SUBDIR += mrbayes
|
|
SUBDIR += mummer
|
|
SUBDIR += muscle
|
|
SUBDIR += ncbi-blast+
|
|
SUBDIR += ncbi-toolkit
|
|
SUBDIR += p5-AcePerl
|
|
SUBDIR += p5-Bio-ASN1-EntrezGene
|
|
SUBDIR += p5-Bio-Das
|
|
SUBDIR += p5-Bio-Das-Lite
|
|
SUBDIR += p5-Bio-GFF3
|
|
SUBDIR += p5-Bio-Glite
|
|
SUBDIR += p5-Bio-Graphics
|
|
SUBDIR += p5-Bio-MAGETAB
|
|
SUBDIR += p5-Bio-NEXUS
|
|
SUBDIR += p5-Bio-Phylo
|
|
SUBDIR += p5-Bio-SCF
|
|
SUBDIR += p5-bioperl
|
|
SUBDIR += p5-bioperl-run
|
|
SUBDIR += paml
|
|
SUBDIR += phrap
|
|
SUBDIR += phred
|
|
SUBDIR += phylip
|
|
SUBDIR += phyml
|
|
SUBDIR += platon
|
|
SUBDIR += plink
|
|
SUBDIR += plinkseq
|
|
SUBDIR += primer3
|
|
SUBDIR += protomol
|
|
SUBDIR += psi88
|
|
SUBDIR += py-biopython
|
|
SUBDIR += pycogent
|
|
SUBDIR += pyfasta
|
|
SUBDIR += python-nexus
|
|
SUBDIR += recombine
|
|
SUBDIR += ruby-bio
|
|
SUBDIR += samtools
|
|
SUBDIR += seaview
|
|
SUBDIR += seqan
|
|
SUBDIR += seqio
|
|
SUBDIR += seqtools
|
|
SUBDIR += sim4
|
|
SUBDIR += ssaha
|
|
SUBDIR += tRNAscan-SE
|
|
SUBDIR += t_coffee
|
|
SUBDIR += tinker
|
|
SUBDIR += treepuzzle
|
|
SUBDIR += treeviewx
|
|
SUBDIR += ugene
|
|
SUBDIR += vcftools
|
|
SUBDIR += velvet
|
|
SUBDIR += wise
|
|
SUBDIR += xmolwt
|
|
|
|
.include <bsd.port.subdir.mk>
|