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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-02 01:20:54 +00:00
freebsd-ports/science
2011-03-31 16:03:03 +00:00
..
2d-rewriter - Update to 1.4 2010-01-12 03:02:16 +00:00
2dhf - Change sed delimiters away from , 2009-10-04 20:26:01 +00:00
abinit Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
afni Bounce PORTREVISION for gettext-related ports. Have fun, ya'll. 2010-05-31 02:01:56 +00:00
at Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now 2009-09-13 00:08:01 +00:00
avogadro - Update to 1.0.1 2010-07-16 01:29:59 +00:00
bblimage
bddsolve Bddsolve is a BDD-based tool for solving satisfiability and reachability 2010-05-12 13:25:37 +00:00
bft Make fetchable again. 2010-09-29 19:33:17 +00:00
bodr - Update to 9 2010-07-31 22:13:27 +00:00
brian - Update to 1.3.0 2011-02-21 00:25:05 +00:00
buddy Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
cdcl - update to 1.4.1 2010-03-28 06:47:48 +00:00
cdf - Update to 3.3.0 2010-01-21 21:14:54 +00:00
cdo - Update to 1.4.7 2011-03-01 02:44:32 +00:00
cgnslib - Upgrade to 2.5-5. 2011-02-26 10:23:14 +00:00
checkmol - Welcome to fpc 2.4.2 2010-11-15 22:50:44 +00:00
chemical-mime-data - update to 1.4.1 2010-03-28 06:47:48 +00:00
chemtool - update to 1.4.1 2010-03-28 06:47:48 +00:00
chemtool-devel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
clhep - Update to 2.1.0.1 2010-11-13 11:13:13 +00:00
colt - Fix fetch error 2011-01-16 01:37:19 +00:00
crf++ Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
dcl Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now 2009-09-13 00:08:01 +00:00
devisor
dtiquery - Chase math/vtk5 update 2010-04-03 15:36:30 +00:00
ecs Chase the upgrade of science/cgnslib to 2.5-5; this implies to 2011-02-26 10:23:19 +00:00
elmer-eio - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmer-fem - Mark ports that have been broken for six month or more, or never compiled on 2011-03-17 11:08:44 +00:00
elmer-hutiter - Fixed fetch of port 2011-02-28 13:46:36 +00:00
elmer-matc - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmer-meshgen2d - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmergrid - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
elmerpost - Update my mail address to FreeBSD 2009-11-27 22:52:30 +00:00
epte Update my MAINTAINER address to culot@FreeBSD.org. 2010-10-20 05:53:20 +00:00
euler - update to 1.4.1 2010-03-28 06:47:48 +00:00
fastcap Deprecate unmaintained ports from science where upstream disapear and/or 2011-03-13 21:47:45 +00:00
fasthenry update to 3.0wr-011109 and adopt 2011-03-31 16:03:03 +00:00
felt - Switch SourceForge ports to the new File Release System: categories starting with P,R,S 2009-08-22 00:35:32 +00:00
flounder - update to 1.4.1 2010-03-28 06:47:48 +00:00
fvm Fix the previous commit. 2011-03-01 17:59:32 +00:00
g3data Drop maintainership for ports I can't maintain anymore. 2010-10-25 20:09:06 +00:00
gamess NO_CDROM is redundant when RESTRICTED is set. 2011-01-24 03:54:45 +00:00
gave - update to 1.4.1 2010-03-28 06:47:48 +00:00
gchemutils Update to 0.12.7. 2011-03-25 12:32:48 +00:00
gdis - update to 1.4.1 2010-03-28 06:47:48 +00:00
gerris Presenting GNOME 2.30.1 for FreeBSD. The offical release notes for this 2010-05-10 21:19:08 +00:00
getdp - Bump PORTREVISION to chase the update of math/gsl 2010-03-29 01:12:27 +00:00
ghemical - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
ghmm Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gnudatalanguage - Chase math/plplot shlib bump 2011-03-04 15:28:53 +00:00
gramps - Fix plist and unbreak - do not overwrite file installed by shared-mime-info 2010-12-09 14:43:26 +00:00
gromacs - change MAINTAINER to my @FreeBSD.org address 2010-12-27 22:02:09 +00:00
gsmc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gsystem - update to 1.4.1 2010-03-28 06:47:48 +00:00
gtamsanalyzer LICENSE GPLv2 2010-06-05 19:53:32 +00:00
gwyddion Bounce PORTREVISION for gettext-related ports. Have fun, ya'll. 2010-05-31 02:01:56 +00:00
h5utils h5utils is a set of utilities for visualization and conversion of 2011-03-18 19:42:35 +00:00
harminv Harminv is a free program (and accompanying library) to solve the problem 2010-01-02 02:54:00 +00:00
hdf - update to jpeg-8 2010-02-05 11:46:55 +00:00
hdf5 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
hdf5-18 - Update to 1.8.6 2011-03-12 10:07:53 +00:00
hdf-java Update to 2.7 2011-03-17 17:24:59 +00:00
hs-bio - Add DIST_SUBDIR for Haskell Cabal ports (with default of "cabal") 2010-08-08 08:49:38 +00:00
ics - Fix build with new tix 2010-12-06 21:05:20 +00:00
InsightToolkit - Switch SourceForge ports to the new File Release System: categories starting with P,R,S 2009-08-22 00:35:32 +00:00
isaac-cfd Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now 2009-09-13 00:08:01 +00:00
jmol - Update to 11.8.24 2010-06-03 08:22:14 +00:00
jstrack - Update from 3.0.3 to 3.1.0. 2010-07-27 15:07:33 +00:00
kmovisto - update to 1.4.1 2010-03-28 06:47:48 +00:00
kst - Bump PORTREVISION to chase the update of astro/cfitsio 2011-01-05 06:58:15 +00:00
kst2 Update to 2.0.3 2011-03-30 21:20:14 +00:00
lamprop
libctl Apparently builds on amd64, but not i386 (an unusual case). 2011-03-11 21:27:31 +00:00
libghemical - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
libint
libkml libkml is a library for use with applications that want to 2009-10-07 11:10:21 +00:00
liblinear - Update to 1.7 2010-09-13 14:02:28 +00:00
liboglappth - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
libquantum Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
libsvm - Use INSTALL_LIB when installing shared lib and create symlink so configure 2010-11-10 14:06:44 +00:00
libsvm-python Update to 2.91 which includes a new rewritten Python interface 2010-04-05 10:24:25 +00:00
linsmith - Update to 0.99.21 2011-03-27 17:13:49 +00:00
massxpert - Update to 2.4.3 2011-03-31 06:51:37 +00:00
mayavi - Fix Coredump 2011-03-18 09:59:55 +00:00
mbdyn - Chase ginac shlib bump 2011-03-04 14:08:57 +00:00
mcstas - Update to 1.12b 2010-08-22 03:31:54 +00:00
medit Upgrade to 2011.03.06. 2011-03-07 20:59:00 +00:00
meep Clean up "current" versions of autotools components to further reduce 2010-12-08 19:58:49 +00:00
minc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
minc2 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
mol2ps - Welcome to fpc 2.4.2 2010-11-15 22:50:44 +00:00
mpb - Bump PORTREVISION to chase the update of libctl 2010-01-24 02:14:17 +00:00
mpqc Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
mpqc-mpich
ncs Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
netcdf - Use LOCAL/sunpoet as backup MASTER_SITES 2010-10-01 01:14:18 +00:00
netcdf3-ftn - Update MAINTAINER to my FreeBSD.org address 2010-09-22 17:10:26 +00:00
netcdf4 - Use LOCAL/sunpoet as backup MASTER_SITES 2010-10-01 01:14:18 +00:00
netcdf-ftn - Update MAINTAINER to my FreeBSD.org address 2010-09-22 17:10:26 +00:00
nifticlib - Switch SourceForge ports to the new File Release System: categories starting with P,R,S 2009-08-22 00:35:32 +00:00
oases Deprecate unmaintained ports from science where upstream disapear and/or 2011-03-13 21:47:45 +00:00
omnetpp - update to 1.4.1 2010-03-28 06:47:48 +00:00
openbabel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
ovt - update to 1.4.1 2010-03-28 06:47:48 +00:00
p5-Algorithm-SVMLight - only 13% of the p5- ports embed @comment $FreeBSD$: 2010-09-24 02:03:44 +00:00
p5-Chemistry-3DBuilder - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Bond-Find - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Canonicalize - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Elements - lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks 2009-07-22 16:27:08 +00:00
p5-Chemistry-File-MDLMol - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-Mopac - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-SMARTS - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-SMILES - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-VRML - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-File-XYZ - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-FormulaPattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-InternalCoords - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Isotope - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Mok - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Mol
p5-Chemistry-Pattern - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Reaction - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Chemistry-Ring - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Geo-BUFR BUFR = Binary Universal Form for the Representation of meteorological data. 2011-03-10 06:15:55 +00:00
p5-Geo-Coordinates-Converter - Update to 0.10 2011-02-14 03:04:29 +00:00
p5-Geo-ReadGRIB - Update to 1.21 2009-11-22 03:15:14 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.006 2010-07-04 02:35:49 +00:00
p5-PerlMol - /mach/ -> /%%PERL_ARCH%%/ 2010-09-24 01:48:27 +00:00
p5-Physics-Unit Update my MAINTAINER address to culot@FreeBSD.org. 2010-10-20 05:53:20 +00:00
paje LICENSE LGPL21 2010-06-05 06:14:28 +00:00
paraview - Update to 3.8.1. 2010-12-17 15:42:56 +00:00
pcp - Mark ports that have been broken for six month or more, or never compiled on 2011-03-17 11:08:44 +00:00
peekabot Return these ports to the pool. 2011-03-02 23:59:52 +00:00
pnetcdf Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
psi3 Build fix with gotoblas. 2010-02-16 07:23:49 +00:00
psychopy - Update to 1.63.03 2011-03-01 09:38:21 +00:00
py-biolccc Update to 1.3.0 2011-03-10 17:01:09 +00:00
py-DendroPy - Update to 3.7.1 2010-10-21 01:45:15 +00:00
py-h5py - Add py-numpy into RUN_DEPENDS 2010-02-01 11:27:58 +00:00
py-hcluster - update to 1.4.1 2010-03-28 06:47:48 +00:00
py-mdp - Move to py25 or above 2011-02-25 00:47:51 +00:00
py-mlpy - Update to 2.2.2 2010-12-23 08:22:39 +00:00
py-netCDF4 - Update to 0.9.3 2010-10-29 01:41:56 +00:00
py-obspy-core The obspy.core package contains common methods and classes 2011-03-16 08:46:36 +00:00
py-obspy.gse2 - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.mseed - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.signal - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.wav The obspy.wav package contains methods in order to read and write 2011-03-21 06:28:57 +00:00
py-openbabel Update to 2.2.3 2010-06-26 19:17:44 +00:00
py-paida - Get rip python 2.3+ 2009-12-13 17:00:14 +00:00
py-pydicom - Update to 0.9.4.1 2010-06-25 02:39:08 +00:00
py-scimath - Fix fetch 2011-02-22 01:15:35 +00:00
py-scipy - Move to py25 or above 2011-02-25 00:47:51 +00:00
pybrain PyBrain is a modular Machine Learning Library for Python. 2009-11-19 13:44:38 +00:00
pycdf - Switch SourceForge ports to the new File Release System: categories starting with P,R,S 2009-08-22 00:35:32 +00:00
pynn PyNN(pronounced 'pine') is a simulator-independent language for 2010-05-19 05:31:44 +00:00
pyvox
qcl
qtresistors - update to 1.4.1 2010-03-28 06:47:48 +00:00
R-cran-AMORE R-cran-AMORE was born to release the TAO robust neural network algorithm 2011-03-07 10:57:09 +00:00
R-cran-bayesm bayesm covers many important models used in marketing and micro-econometrics 2011-03-07 12:04:35 +00:00
ruby-dcl - update to 1.4.1 2010-03-28 06:47:48 +00:00
ruby-gphys - Update to 1.0.0 2010-04-28 06:00:33 +00:00
ruby-netcdf - Update to 0.6.5 2011-02-20 11:31:04 +00:00
rubygem-ai4r AI4R is a collection of ruby algorithms implementations, 2011-03-25 12:08:20 +00:00
silo Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
simlib Not for powerpc, either. 2010-04-01 10:24:44 +00:00
svmlight
szip Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
udunits - Update to 2.1.21 2011-02-04 19:46:12 +00:00
v_sim Fix build with gcc-4.5.2.20101118. 2010-11-25 17:54:06 +00:00
veusz - Move to py25 or above 2011-02-25 00:47:51 +00:00
vis5d+ Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
vmd - Add files/patch-bin_vmd.csh, files/patch-bin_vmd.sh 2010-12-18 09:24:21 +00:00
x11iraf
xmakemol For ports maintained by ports@FreeBSD.org, remove names and/or 2009-12-21 02:19:12 +00:00
xmds Purge 3 outdated, old-and-busted, versions of automake as part of 2010-09-23 00:40:50 +00:00
Makefile AI4R is a collection of ruby algorithms implementations, 2011-03-25 12:08:20 +00:00