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mirror of https://git.FreeBSD.org/ports.git synced 2025-01-01 05:45:45 +00:00
freebsd-ports/biology
2015-03-24 16:56:27 +00:00
..
ariadne 6 ports categories: Remove $PTHREAD_LIBS 2015-03-24 16:01:21 +00:00
artemis - Add empty directory to plist 2015-03-11 14:41:53 +00:00
avida
babel
biococoa
biojava
blat
chemeq
clustalw
consed
crux
emboss Fix packaging as a user (pkg already takes care of credentials) 2015-03-18 21:52:19 +00:00
fasta
fasta3
fastdnaml
fluctuate
garlic
gff2ps
gmap
gperiodic
grappa
hmmer
htslib biology/htslib: update 1.1 -> 1.2.1 2015-03-06 12:45:22 +00:00
iolib - Update to 1.13.10 2015-03-04 13:17:46 +00:00
jalview
lagan
lamarc
libsbml
linux-foldingathome
mafft 6 ports categories: Remove $PTHREAD_LIBS 2015-03-24 16:01:21 +00:00
mapm3
migrate Upgrade from 3.6.6 to 3.6.7. Be sure to not extract the zlib 2015-03-24 16:56:27 +00:00
molden
mopac
mrbayes
mummer
muscle
ncbi-blast+ Add a run dependency used by update_blastdb.pl 2015-03-06 10:39:31 +00:00
ncbi-toolkit
njplot
ortep3
p5-AcePerl - Simplify MASTER_SITES 2015-03-17 03:09:25 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite Remove TEST dependency on p5-Test-Simple when the version in core is 2015-02-26 16:54:41 +00:00
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics Some OCD cleanups on some of the perl@ ports. 2015-03-12 23:00:02 +00:00
p5-Bio-MAGETAB Some OCD cleanups on some of the perl@ ports. 2015-03-12 23:00:02 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl Some OCD cleanups on some of the perl@ ports. 2015-03-12 23:00:02 +00:00
p5-bioperl-run For the new USE_GITHUB with only GH_TAGNAME set default DISTNAME to 2015-03-20 20:07:50 +00:00
paml
phrap
phred
phylip
phyml
platon Unbreak by upgrading to March 5, 2015 "release" from upstream. 2015-03-08 23:13:21 +00:00
plink
plinkseq
povchem
primer3
protomol
psi88
py-biopython biology/py-biopython: 2015-01-19 20:21:12 +00:00
pycogent
pyfasta
python-nexus
recombine
ruby-bio
samtools biology/samtools: update 1.1 -> 1.2 2015-03-06 12:53:58 +00:00
seaview biology/seaview: Update version 4.5.3.4=>4.5.4 2015-03-24 10:15:30 +00:00
seqan biology/segan: Limit GCC to 4.8 while waiting for update 2015-03-21 11:53:27 +00:00
seqio
seqtools biology/seqtools: 4.31 -> 4.32 2015-02-12 12:04:09 +00:00
sim4
ssaha
t_coffee Remove Authors from pkg-descr 2015-03-02 23:09:43 +00:00
tinker Update from 7.1.1 to 7.1.2. 2015-03-11 13:44:21 +00:00
treepuzzle
treeviewx
tRNAscan-SE
ugene - Update to version 1.16.1 2015-03-23 01:44:43 +00:00
velvet Designatate 4 ports as unsafe for parallel building 2015-01-19 17:43:57 +00:00
wise
xmolwt
Makefile