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sequences. It stands for Sequence Search and Alignment by Hashing Algorithm. It achieves its fast search speed by converting sequence information into a `hash table' data structure, which can then be searched very rapidly for matches. WWW: http://www.sanger.ac.uk/Software/analysis/SSAHA/ PR: ports/124525 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> Approved by: gabor (mentor, implicit)
10 lines
221 B
Plaintext
10 lines
221 B
Plaintext
bin/ssaha
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%%DATADIR%%/testSSAHA.csh
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%%DATADIR%%/test.fasta
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%%DATADIR%%/test_extract.fasta
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%%DATADIR%%/test_filter.fail
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%%DATADIR%%/test_filter.fastq
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%%DATADIR%%/test_protein.fasta
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%%DATADIR%%/README
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@dirrmtry %%DATADIR%%
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