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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-04 01:48:54 +00:00
freebsd-ports/biology
Kurt Jaeger 0269d640fc biology/seqtools: 4.35 -> 4.36
Minor under-the-hood changes
2015-08-08 11:22:24 +00:00
..
ariadne
artemis
avida Use BROKEN helpers 2015-06-27 14:29:25 +00:00
babel Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
bcftools New port: biology/bcftools 2015-06-05 21:01:13 +00:00
biococoa
biojava
blat
chemeq
clustalw
consed
crux
emboss
fasta
fasta3
fastdnaml
fluctuate Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
garlic
gff2ps
gmap
gperiodic
grappa
hmmer
htslib
iolib - Update to 1.14.0 2015-07-12 18:25:07 +00:00
jalview Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
lagan - Fix shebangs 2015-06-11 10:17:24 +00:00
lamarc
libsbml
linux-foldingathome
mafft Use BROKEN helpers 2015-06-27 14:30:19 +00:00
mapm3
migrate - Update options 2015-06-28 15:30:41 +00:00
molden
mopac
mrbayes
mummer Fix build on mips by properly respecting compiler and flags 2015-08-05 12:18:41 +00:00
muscle
ncbi-blast+
ncbi-toolkit
njplot
ortep3
p5-AcePerl After r390893, chmod u+w/u-w for stripping perl XS modules is unnecessary, 2015-06-29 15:47:44 +00:00
p5-Bio-ASN1-EntrezGene Start removing MASTER_SITE_SUBDIR=CPAN:username where possible. The 2015-06-24 15:16:23 +00:00
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS - Add NO_ARCH 2015-05-31 13:37:20 +00:00
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl - Fix shebangs 2015-05-30 12:31:59 +00:00
p5-bioperl-run
paml
phrap
phred
phylip Unbreak 2015-07-28 17:52:11 +00:00
phyml
platon
plink
plinkseq
povchem Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
primer3
protomol - Add LICENSE 2015-06-25 09:32:18 +00:00
psi88 - Strip binaries 2015-06-03 17:27:08 +00:00
py-biopython Update to 1.65. 2015-08-05 10:32:31 +00:00
pycogent
pyfasta
python-nexus
recombine
ruby-bio
samtools
seaview
seqan
seqio
seqtools biology/seqtools: 4.35 -> 4.36 2015-08-08 11:22:24 +00:00
sim4
ssaha
t_coffee
tinker Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
treepuzzle
treeviewx
tRNAscan-SE
ugene - Update Unipro UGENE to version 1.17.0 (documentation was also rerolled) 2015-07-15 07:18:08 +00:00
velvet
wise
xmolwt
Makefile New port: biology/bcftools 2015-06-05 21:01:13 +00:00