Max Brazhnikov 75eb220ebb - Add option (on by default) to make the help browser work ... - Relocate JGraphx substitution to allow running Scilab Java components from WRKDIR before install (necessary to build docs) - DATADIR/.atoms shouldn't be GUI only PR: ports/153402 Submitted by: Rob Farmer (maintainer)		2010-12-23 19:39:09 +00:00
..
aamath
abakus
abs
add	Update my MAINTAINER address to culot@FreeBSD.org.	2010-10-20 05:53:20 +00:00
algae	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
algotutor
ann
apc
aribas
arpack
arpack++
asir2000	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
asymptote	- Update to 2.04	2010-08-29 21:13:34 +00:00
atlas
atlas-devel
bamg
biggles
bihar
blacs	Chase the upgrade of MPICH2.	2010-11-14 22:00:16 +00:00
blas	Fix build on FBSD 6.	2010-09-27 05:25:39 +00:00
blitz++	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
blocksolve95
calc	Update to calc 2.12.4.3	2010-09-04 09:08:50 +00:00
calcoo
calctool
ccmath
cgal	- Update to 3.6.1	2010-10-11 08:46:10 +00:00
chaco
chryzodus
clarence
cln	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
clp
concorde
convertall
coq	Fix build with new ocaml preprocessor (patch from upstream)	2010-12-10 17:23:11 +00:00
cvc3
dcdflib
diehard
dieharder	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
digitizer
dislin	Deprecate md5 in favour of sha256 checksums. md5 checksums will no longer	2010-10-28 21:00:21 +00:00
djbfft
drgeo
e
edenmath
eigen
eigen2	Remove old information.	2010-09-30 12:12:04 +00:00
eigen3	Remove old information.	2010-09-30 12:12:04 +00:00
eispack
elmer-umfpack
emacs-calc
emc2	Allow non-interactive builds by adding "auto-accept" to LICENSE_PERMS	2010-09-07 22:28:54 +00:00
entropy
eukleides
eval
facile
fann
fbm
femlab
fftw	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
fftw3
fftw3-float
fftw3-long
fftw-float
fityk	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
fpc-fftw
fpc-gmp
fpc-numlib
freefem	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
freemat	- Added new patches to support building under gcc 4.5 due to impending	2010-09-24 14:58:14 +00:00
freemat-mpi
fricas	- Update to 1.1.1	2010-11-25 07:16:02 +00:00
fudgit
fung-calc	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
fxt	- Update to 2010.11.28	2010-11-30 20:48:22 +00:00
galculator
gambit	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
gap	Update to latest gap packages release	2010-10-28 18:55:34 +00:00
gcalctool	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
gdcalc
geg	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
geogebra-i18n
geometry	Fix arguments to ${FIND} so that temporary directories are deleted again	2010-11-29 16:42:54 +00:00
geonext
gexpr
ggobi
giacxcas	- Fix build on FreeBSD 8.0	2010-10-13 12:44:24 +00:00
GiNaC	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
glgraph
glpk
gmm++
gmp
gmp-ecm	Update my MAINTAINER address to culot@FreeBSD.org.	2010-10-20 05:53:20 +00:00
gnubc
gnumeric	Update to 1.10.12.	2010-11-29 05:58:36 +00:00
gnuplot
gnuplot+	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
goblin
gotoblas	a. remove RESTRICTED line	2010-11-29 00:53:10 +00:00
grace
gracetmpl
graphthing
gretl	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
gri
grpn
gsl
guppi	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
hexcalc
hs-Agda
hs-Agda-executable
hs-category-extras
hs-erf
hs-mwc-random	- Update to 0.7.0.1	2010-08-30 10:49:31 +00:00
hs-probability
hs-statistics
hs-vector-space
igraph	- Update to 0.5.4	2010-11-08 07:18:52 +00:00
isabelle	Update to 2009.2	2010-10-30 18:34:26 +00:00
ised
itl
jacal
jags
jakarta-commons-math
jama	Update maintainer's email address.	2010-12-01 23:12:16 +00:00
javanns
javaview
jeuclid
jlatexmath	Correct run dependencies by using ':=' assign	2010-12-01 07:29:13 +00:00
jsmath
jsmath-fonts
jsmath-fonts-sprite
jtransforms	Add JTransforms, an open source, multithreaded FFT library written	2010-10-01 11:21:23 +00:00
jts
k3dsurf
kash3
kaskade
kcalc	- Chase security/libksba shlib version bump	2010-12-16 02:34:07 +00:00
koctave	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
kseg
labplot	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
lambda
lapack	Build fix for science/mpqc, graphics/mypaint,	2010-12-04 09:10:23 +00:00
lapack95
lapack++
laspack
ldouble
lensnns
levmar	- WITH_BLAS knob was updated for GotoBLAS (math/gotoblas) support.	2010-12-18 00:44:22 +00:00
libjbigi
liblbfgs	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
libmath++	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
libneural	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
liborigin
libqalculate	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
librandlib
libranlip
libRmath
libtommath
libtsnnls	libtsnnls is a fast solver for least-squares problems in the	2010-10-19 11:00:55 +00:00
linalg
linpack
linux-relview
linux-SHA-1_collision_search_graz
lll_spect
lp_solve
ltl	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
lybniz
matharray	- LICENSE LGPL20	2010-10-16 14:13:26 +00:00
mathomatic	Update to 15.3.6	2010-12-22 22:04:39 +00:00
matio
matrices
matrix
maxima	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
mbasecalc
metis
metis4
metis-edf	Chase Code_Aster's upgrade.	2010-09-16 21:23:32 +00:00
mingw32-libgmp
mingw32-libgmp4
miracl
moo
mpc
mpexpr
mpfr
mprime	- use SUB_FILES appropriately instead of SED directly	2010-09-08 22:04:45 +00:00
msieve	Fix build	2010-08-29 08:52:36 +00:00
mtl
mtrxmath
mumps	Chase the upgrade of MPICH2.	2010-11-14 22:00:23 +00:00
mumps-mpich
mupad
muparser	- Update to 1.34	2010-09-21 19:56:24 +00:00
naturalmath
nauty
ndiff
newmat
ngraph
nsc2ke
ntl	- Fix linking with libntl on amd64	2010-09-29 00:16:09 +00:00
numdiff
nyh-hoc
ocaml-ocamlgraph	Update ocamlgraph to 1.6	2010-12-15 20:16:27 +00:00
octave	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
octave-devel	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
octave-forge
octave-forge-actuarial
octave-forge-ad
octave-forge-audio
octave-forge-base
octave-forge-bim
octave-forge-bioinfo
octave-forge-civil-engineering
octave-forge-combinatorics
octave-forge-communications
octave-forge-control
octave-forge-data-smoothing
octave-forge-dataframe	Add new port math/octave-forge-dataframe:	2010-08-29 15:34:55 +00:00
octave-forge-econometrics
octave-forge-engine
octave-forge-es
octave-forge-fenv
octave-forge-financial
octave-forge-fpl
octave-forge-ga	Update to 0.9.8	2010-09-05 19:36:09 +00:00
octave-forge-general
octave-forge-generate_html
octave-forge-gnuplot
octave-forge-gsl
octave-forge-ident
octave-forge-image
octave-forge-informationtheory
octave-forge-integration
octave-forge-io	- Update to 1.0.13	2010-09-14 07:54:58 +00:00
octave-forge-irsa
octave-forge-linear-algebra
octave-forge-mapping
octave-forge-miscellaneous
octave-forge-missing-functions
octave-forge-msh
octave-forge-multicore
octave-forge-nan
octave-forge-nlwing2
octave-forge-nnet
octave-forge-nurbs
octave-forge-ocs
octave-forge-oct2mat
octave-forge-octcdf
octave-forge-octgpr
octave-forge-octproj
octave-forge-odebvp
octave-forge-odepkg
octave-forge-optim
octave-forge-optiminterp
octave-forge-outliers
octave-forge-parallel	- Update to 2.0.4	2010-09-14 07:57:15 +00:00
octave-forge-pdb
octave-forge-physicalconstants
octave-forge-plot
octave-forge-pt_br
octave-forge-quaternion
octave-forge-secs1d
octave-forge-secs2d
octave-forge-signal
octave-forge-simp
octave-forge-sockets
octave-forge-spanish
octave-forge-specfun
octave-forge-special-matrix
octave-forge-spline-gcvspl
octave-forge-splines
octave-forge-statistics
octave-forge-strings
octave-forge-struct
octave-forge-symband
octave-forge-symbolic
octave-forge-tcl-octave
octave-forge-time
octave-forge-tsa
octave-forge-video
octave-forge-xraylib
octave-forge-zenity
oleo	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
open-axiom
orpie
p5-AI-DecisionTree
p5-AI-Genetic
p5-AI-NeuralNet-BackProp
p5-AI-Perceptron
p5-Algorithm-Combinatorics
p5-Algorithm-CurveFit	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-Algorithm-KMeans	- Update to 1.21	2010-10-21 09:25:50 +00:00
p5-Algorithm-Munkres
p5-bignum
p5-Bit-ShiftReg
p5-Bit-Vector
p5-Bit-Vector-Minimal
p5-CAD-Calc
p5-Chart-Math-Axis
p5-Data-Float	- Update to 0.011	2010-10-22 01:02:14 +00:00
p5-Date-Handler
p5-Geo-Coordinates-UTM
p5-Geo-Distance
p5-Geo-Distance-XS
p5-GIS-Distance	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-GIS-Distance-Fast
p5-GIS-Distance-Lite
p5-Graph
p5-Math-Algebra-Symbols
p5-Math-Base36	math/p5-Math-BigInt is part of perl core modules since at least 5.6+	2010-09-22 07:48:02 +00:00
p5-Math-Base85
p5-Math-BaseCalc
p5-Math-BaseCnv
p5-Math-Bezier
p5-Math-Bezier-Convert
p5-Math-BigInt
p5-Math-BigInt-FastCalc	- @comment cleanup in p5-* pkg-plist	2010-12-12 03:52:24 +00:00
p5-Math-BigInt-GMP	- Update to 1.32	2010-09-26 01:06:20 +00:00
p5-Math-BigInt-Pari	- update to 1.14	2010-10-30 22:57:52 +00:00
p5-Math-BigRat	- update to 0.26	2010-10-14 20:25:21 +00:00
p5-Math-Calc-Units
p5-Math-CDF	- Also remove them from pkg-plist lists not from me that crept in	2010-11-24 06:19:46 +00:00
p5-Math-Cephes
p5-Math-Combinatorics
p5-Math-Complex	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-Math-ConvexHull
p5-Math-Currency	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-Math-Derivative
p5-Math-Evol	- Update to 1.12	2010-08-30 06:24:45 +00:00
p5-Math-Expr
p5-Math-FFT
p5-Math-FixedPrecision	math/p5-Math-BigInt is part of perl core modules since at least 5.6+	2010-09-22 07:48:02 +00:00
p5-Math-Geometry	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-Math-Geometry-Planar
p5-Math-Geometry-Planar-GPC
p5-Math-Geometry-Planar-Offset
p5-Math-Geometry-Voronoi
p5-Math-GMP	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-Math-Gradient
p5-Math-GSL
p5-Math-Interpolate
p5-Math-Intersection-StraightLine
p5-Math-LinearCombination
p5-Math-Logic
p5-Math-Matrix
p5-Math-MPC	Update to 0.83	2010-09-25 20:13:48 +00:00
p5-Math-MPFR
p5-Math-NumberCruncher	math/p5-Math-BigInt is part of perl core modules since at least 5.6+	2010-09-22 07:48:02 +00:00
p5-Math-Pari
p5-Math-Polygon
p5-Math-Polynomial-Solve	- Update to 2.60	2010-12-16 07:13:38 +00:00
p5-Math-Random
p5-Math-Random-ISAAC
p5-Math-Random-ISAAC-XS
p5-Math-Random-MT	- Update to 1.12	2010-09-29 03:24:27 +00:00
p5-Math-Random-MT-Auto	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-Math-Random-OO
p5-Math-RandomOrg	math/p5-Math-BigInt is part of perl core modules since at least 5.6+	2010-09-22 07:48:02 +00:00
p5-Math-Round
p5-Math-Round-Var
p5-Math-RPN
p5-Math-Sequence
p5-Math-Series
p5-Math-SigFigs	- /mach/ -> /%%PERL_ARCH%%/	2010-09-24 01:48:27 +00:00
p5-Math-SimpleVariable
p5-Math-Spline
p5-Math-Symbolic
p5-Math-Symbolic-Custom-CCompiler
p5-Math-Symbolic-Custom-Contains
p5-Math-Symbolic-Custom-ErrorPropagation
p5-Math-Symbolic-Custom-LaTeXDumper
p5-Math-Symbolic-Custom-Pattern
p5-Math-Symbolic-Custom-Simplification
p5-Math-Symbolic-Custom-Transformation
p5-Math-SymbolicX-BigNum
p5-Math-SymbolicX-Complex
p5-Math-SymbolicX-Error
p5-Math-SymbolicX-Inline
p5-Math-SymbolicX-NoSimplification
p5-Math-SymbolicX-ParserExtensionFactory
p5-Math-SymbolicX-Statistics-Distributions
p5-Math-TrulyRandom
p5-Math-Units
p5-Math-Vec
p5-Math-VecStat
p5-Math-VectorReal
p5-MatrixReal
p5-NetCDF
p5-Number-Compare
p5-Number-Fraction	- /mach/ -> /%%PERL_ARCH%%/	2010-09-24 01:48:27 +00:00
p5-Number-WithError	Update my MAINTAINER address to culot@FreeBSD.org.	2010-10-20 05:53:20 +00:00
p5-Number-WithError-LaTeX
p5-Roman
p5-Set-IntSpan	- update to 1.16	2010-11-12 06:03:46 +00:00
p5-Set-IntSpan-Fast
p5-Set-IntSpan-Fast-XS
p5-Set-Partition
p5-Set-Window
p5-Statistics-Basic
p5-Statistics-Benford
p5-Statistics-ChiSquare
p5-Statistics-Contingency
p5-Statistics-Descriptive	- Update to 3.0200	2010-09-12 11:23:55 +00:00
p5-Statistics-Descriptive-Discrete
p5-Statistics-Distributions
p5-Statistics-Forecast
p5-Statistics-Frequency	- /mach/ -> /%%PERL_ARCH%%/	2010-09-24 01:48:27 +00:00
p5-Statistics-LineFit	- only 13% of the p5- ports embed @comment $FreeBSD$:	2010-09-24 02:03:44 +00:00
p5-Statistics-Lite
p5-Statistics-LTU
p5-Statistics-OLS
p5-Statistics-Regression	- Takeover some of clsung's ports	2010-12-09 02:36:55 +00:00
p5-Statistics-TTest	- %%SITE_PERL%%/auto and %%SITE_PERL%%/%%PERL_ARCH%%/auto	2010-09-24 00:44:29 +00:00
p5-Task-Math-Symbolic
pari
parmetis
parmgridgen	- Add more master sites	2010-12-18 10:37:21 +00:00
PDL
pear-Math_Combinatorics
pecl-big_int
pecl-bitset
pecl-stats
petsc	Chase the upgrade of MPICH2.	2010-11-14 22:00:23 +00:00
petsc-mpich
pgcalc	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
php4-bcmath
php4-gmp
php5-bcmath
php5-gmp
php52-bcmath
php52-gmp
physcalc
plman
ploticus
ploticus-nox11
plplot	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
polymake
primegen
prng
proofgeneral
pspp	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
py-apgl	- Update to 0.6	2010-12-06 13:57:30 +00:00
py-basemap
py-basemap-data
py-bitvector
py-fpconst
py-gato
py-gmpy	- Update to 1.13	2010-10-22 11:07:10 +00:00
py-gnuplot
py-gsl
py-igraph
py-mathdom
py-matplotlib	Remove explicit dependency on graphics/agg, to reduce dependencies.	2010-10-22 10:55:07 +00:00
py-mpmath	- Update to 0.16	2010-09-29 06:26:21 +00:00
py-networkx
py-numarray
py-numeric
py-numexpr	- Update to 1.4.1	2010-10-21 01:39:56 +00:00
py-numpy	Update to 1.5.1	2010-12-01 06:07:59 +00:00
py-plastex
py-probstat
py-pymc
py-scientific
py-svgmath
py-symeig
py-sympy
qalculate
qd
qgfe
qhull	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
qhull5	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
qrupdate
qscanplot
qtiplot
qtiplot-doc
qtoctave	Update to 0.9.1	2010-11-28 20:20:12 +00:00
qwtplot3d
qwtplot3d-qt4
R	Chase devel/icu upgrade	2010-12-15 11:37:49 +00:00
R-cran-car	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
R-cran-gpclib	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
R-cran-igraph	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
R-cran-inline	- Update to 0.3.6	2010-10-21 08:16:34 +00:00
R-cran-psych	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
R-cran-RSvgDevice	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
R-cran-sm	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
R-cran-sp	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
R-cran-Zelig	- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk	2010-09-26 07:59:14 +00:00
randlib
rapid
rascal	Mark as deprecated and set expiration date to 2010-12-30 for unmaintained	2010-10-29 22:24:57 +00:00
reed-solomon
rkward	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
rkward-kde4	Add a missing lt locale file.	2010-10-04 20:13:05 +00:00
rngstreams
ros-geometry	Fix arguments to ${FIND} so that temporary directories are deleted again	2010-11-29 16:42:54 +00:00
rpc
rpcalc
rpy
rpy2
ruby-algebra
ruby-bitset
ruby-bitvector
ruby-fftw3
ruby-gmp
ruby-gnuplot
ruby-gsl
ruby-narray
ruby-narray_miss
ruby-netcdf
ruby-numru_misc
ruby-numru_units
saga	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
sc
scalapack
scigraphica
scilab	- Add option (on by default) to make the help browser work	2010-12-23 19:39:09 +00:00
scilab-toolbox-sivp	Remove IGNORE, scilab port was fixed.	2010-12-19 10:02:33 +00:00
scilab-toolbox-swt	Remove IGNORE, scilab port was fixed.	2010-12-19 10:02:16 +00:00
sdpa
sdpa-gmp
sdpara	Chase the upgrade of MPICH2.	2010-11-14 22:00:23 +00:00
sedumi
simd-viterbi
slgrace
snns
solitaire
spar	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
speedcrunch
spooles
spooles-mpich
ss
stepulator	- cleanup LICENSE_FILE	2010-11-18 15:51:50 +00:00
stp
suitesparse
superlu
superlu_mt
surf	- Annotate conflict between math/surf and www/surf	2010-11-23 09:57:57 +00:00
tablix
taucs
testu01
tetgen
timbl
tomsfastmath
topaz
triangle
truthtable
tvmet	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
umatrix
ump
units
unixstat
unuran
vtk
vtk5	- Fix the installation of versioned shared libraries	2010-10-20 10:28:46 +00:00
vtk-data	Deprecate md5 in favour of sha256 checksums. md5 checksums will no longer	2010-10-28 21:00:21 +00:00
vtk-examples
vtk-headers
vtk-java
vtk-python
vtk-tcl
wcalc
wfmath
wingz
wingz3
wmcalc
wxMaxima	- Update to 0.8.6	2010-09-11 08:10:06 +00:00
x12arima
xgfe
xgobi
xgraph
xldlas
xlispstat
xplot
xppaut
xspread
yacas	Sync to new bsd.autotools.mk	2010-12-04 07:34:27 +00:00
Makefile	ParMGridGen-1.0 is a highly optimized serial and parallel library	2010-12-15 16:48:09 +00:00