| .. |
|
ariadne
|
|
|
|
artemis
|
|
|
|
avida
|
|
|
|
babel
|
|
|
|
biococoa
|
|
|
|
biojava
|
- add stage support
|
2014-06-01 10:37:22 +00:00 |
|
blast
|
Multiple ports: reset maintainers
|
2014-05-26 02:33:38 +00:00 |
|
blat
|
|
|
|
boinc-simap
|
|
|
|
chemeq
|
|
|
|
clustalw
|
Multiple ports: reset maintainers
|
2014-05-26 02:33:38 +00:00 |
|
consed
|
Replace maintainer's email address with one that seems to work
|
2014-05-10 18:07:52 +00:00 |
|
crux
|
|
|
|
embassy
|
biology/embassy: specify post-extraction with ${TAR}
|
2014-05-29 10:47:58 +00:00 |
|
emboss
|
- Update to 6.6.0
|
2014-06-05 03:28:06 +00:00 |
|
fasta
|
|
|
|
fasta3
|
|
|
|
fastdnaml
|
|
|
|
fluctuate
|
|
|
|
garlic
|
|
|
|
gff2ps
|
|
|
|
gmap
|
|
|
|
gperiodic
|
|
|
|
grappa
|
|
|
|
hmmer
|
|
|
|
iolib
|
- I forgot to svn add a new patch
|
2014-05-31 18:03:08 +00:00 |
|
jalview
|
|
|
|
lagan
|
|
|
|
lamarc
|
|
|
|
libsbml
|
- Update to 5.10.0
|
2014-05-13 07:04:17 +00:00 |
|
linux-foldingathome
|
|
|
|
mafft
|
Add DOCS and EXAMPLE options to biology/mafft
|
2014-05-31 04:18:18 +00:00 |
|
mapm3
|
|
|
|
migrate
|
|
|
|
molden
|
Catch a couple of missing convertsion to :tu/:tl
|
2014-05-05 11:15:53 +00:00 |
|
mopac
|
|
|
|
mrbayes
|
|
|
|
mummer
|
- add stage support
|
2014-06-01 10:54:33 +00:00 |
|
muscle
|
- add stage support
|
2014-06-01 11:05:43 +00:00 |
|
ncbi-toolkit
|
|
|
|
njplot
|
- add stage support
|
2014-06-01 11:26:39 +00:00 |
|
ortep3
|
|
|
|
p5-AcePerl
|
|
|
|
p5-Bio-ASN1-EntrezGene
|
|
|
|
p5-Bio-Das
|
|
|
|
p5-Bio-Das-Lite
|
|
|
|
p5-Bio-GFF3
|
|
|
|
p5-Bio-Glite
|
|
|
|
p5-Bio-Graphics
|
Mark as broken unstaged perl ports
|
2014-04-09 09:49:02 +00:00 |
|
p5-Bio-MAGETAB
|
- update to 1.31
|
2014-05-16 13:33:02 +00:00 |
|
p5-Bio-NEXUS
|
|
|
|
p5-Bio-Phylo
|
|
|
|
p5-Bio-SCF
|
|
|
|
p5-bioperl
|
- Update to 1.6.923
|
2014-05-30 15:46:05 +00:00 |
|
p5-bioperl-run
|
|
|
|
paml
|
|
|
|
phd2fasta
|
Replace maintainer's email address with one that seems to work
|
2014-05-10 18:07:52 +00:00 |
|
phrap
|
Replace maintainer's email address with one that seems to work
|
2014-05-10 18:07:52 +00:00 |
|
phred
|
Replace maintainer's email address with one that seems to work
|
2014-05-10 18:07:52 +00:00 |
|
phylip
|
The FreeBSD x11@ and graphics team proudly presents
|
2014-04-16 18:28:47 +00:00 |
|
phyml
|
|
|
|
platon
|
|
|
|
plink
|
|
|
|
plinkseq
|
|
|
|
povchem
|
|
|
|
primer3
|
Quote ${CC} and similar variables in MAKE_ARGS.
|
2014-05-20 19:32:39 +00:00 |
|
protomol
|
The FreeBSD x11@ and graphics team proudly presents
|
2014-04-16 18:28:47 +00:00 |
|
psi88
|
|
|
|
py-biopython
|
- Stage
|
2014-04-27 01:59:47 +00:00 |
|
pycogent
|
- Stage support [1]
|
2014-05-02 14:00:13 +00:00 |
|
pyfasta
|
- Update to 0.5.2
|
2014-04-06 04:05:43 +00:00 |
|
pymol
|
The FreeBSD x11@ and graphics team proudly presents
|
2014-04-16 18:28:47 +00:00 |
|
python-nexus
|
|
|
|
recombine
|
|
|
|
ruby-bio
|
Support stage
|
2014-04-07 13:01:26 +00:00 |
|
seaview
|
- Update to 4.5.2
|
2014-06-04 06:28:56 +00:00 |
|
seqan
|
- add stage support
|
2014-06-01 11:42:17 +00:00 |
|
seqio
|
|
|
|
seqtools
|
biology/seqtools: 4.25 -> 4.26, fix broken distinfo by upgrading
|
2014-05-02 19:00:04 +00:00 |
|
sim4
|
|
|
|
ssaha
|
|
|
|
t_coffee
|
|
|
|
tinker
|
- Un-break fetch stage: the name scheme of the source tarballs has changed
|
2014-04-22 19:28:18 +00:00 |
|
treepuzzle
|
|
|
|
treeviewx
|
Unbreak
|
2014-06-04 20:08:15 +00:00 |
|
tRNAscan-SE
|
Support stage
|
2014-05-05 10:26:15 +00:00 |
|
ugene
|
|
|
|
velvet
|
- add stage support
|
2014-06-01 11:33:57 +00:00 |
|
wise
|
|
|
|
xmolwt
|
|
|
|
Makefile
|
Remove expired ports:
|
2014-04-18 11:17:45 +00:00 |
