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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-28 05:29:48 +00:00
freebsd-ports/science
Yuri Victorovich ff7490d3b1 science/py-molmod: Update 1.4.7 -> 1.4.8
Reported by:	portscout
2020-06-26 01:57:29 +00:00
..
2d-rewriter science/2d-rewriter: 2020-03-29 05:55:51 +00:00
abinit Mark BROKEN: fails to build 2020-05-29 08:38:54 +00:00
afni science/afni: update 20.1.16 -> 20.1.17 2020-06-21 14:43:48 +00:00
agrum science/agrum: Update 0.17.3 -> 0.18.0 2020-06-15 08:26:22 +00:00
aircraft-datcom audio/festvox-cmu_us_slt_arctic, games/flightgear-terragear, graphics/zathura-cb, graphics/zathura-pdf-poppler, graphics/zathura-ps, math/nfft, net/py-mpi4py, science/aircraft-datcom, x11-themes/gnome-icons-luv: reset MAINTAINER 2020-03-02 17:35:42 +00:00
ALPSCore - Swap back from net/openmpi3 to net/openmpi 2020-04-21 21:26:56 +00:00
antioch math/gsl: update to 2.6 2019-10-25 23:41:34 +00:00
apbs science/apbs: Fix license 2019-05-03 06:15:44 +00:00
atompaw atompaw is actually fetchable 2020-01-05 11:52:46 +00:00
avogadro2 science/avogadro2: Update 1.91.0 -> 1.93.0 2020-02-06 07:09:42 +00:00
avogadrolibs science/avogadrolibs: Remove a broken option VTK set to default by mistake 2020-04-27 16:09:56 +00:00
bagel Chase ScaLAPACK´s upgrade and resolve conflict between cblas and openblas. 2020-06-14 09:14:03 +00:00
bddsolve devel/boost-*: update to 1.72.0 2019-12-11 17:53:48 +00:00
berkeleygw science/berkeleygw: Unbreak build with GCC 10 2020-06-25 06:50:17 +00:00
bodr
brian Deprecate some ports using deprecated version of python 2020-03-08 17:01:46 +00:00
buddy
cdcl Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
cdf - Switch to new test framework (note that test currently segfaults) 2019-08-28 09:02:41 +00:00
cdk New port: science/cdk: Chemistry Development Kit 2020-01-09 16:48:21 +00:00
cdo Remove ACCEPT_USE_OF_DEPRECATED_PROJ_API_H 2020-05-16 10:51:44 +00:00
cgnslib Mark MAKE_JOBS_UNSAFE 2020-06-10 05:22:13 +00:00
cgribex Update to 1.9.4 2020-05-16 10:51:49 +00:00
checkmol - Remove compat < 11 dependencies from bootstrap and compiler. It could fix problems 2020-03-06 06:26:05 +00:00
chemical-mime-data print, science: Add missing USES=gnome 2019-11-08 13:22:59 +00:00
chemps2 Bump 37 ports depending on math/openblas through USES=blaslapack:openblas because after the recent math/openblas update the library name changed in openblas 2020-05-06 16:39:12 +00:00
chemtool Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
chemtool-devel Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
chrono - Update net/openmpi to 4.0.3 (openmpi 1 is deprecated) 2020-04-19 09:49:02 +00:00
clhep Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
clipper Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
code_saturne Upgrade to v6.1.1 and add Scotch´s support. 2020-06-15 16:02:40 +00:00
colt Clean up after java/openjdk6 and java/openjdk6-jre removal 2019-11-26 21:46:12 +00:00
coordgenlibs science/coordgenlibs: Update 1.4.0 -> 1.4.0-6; Fix the missing file templates.mae problem 2020-05-10 19:36:07 +00:00
cp2k Re-add port: science/cp2k: Quantum chemistry and solid state physics software package; Update 6.1.0 -> 7.1.0-20200518 2020-05-20 02:27:15 +00:00
cp2k-data science/cp2k-data: Update 6.1.0 -> 7.1.0 2020-05-25 04:00:02 +00:00
crf++
dalton Bump 46 ports depending on math/openblas because the after the recent math/openblas update the library name changed in openblas. 2020-05-06 16:11:14 +00:00
datawarrior Deprecate java/openjfx8-devel consumers 2020-03-19 09:33:13 +00:00
dcl Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
devisor Clean up after java/openjdk6 and java/openjdk6-jre removal 2019-11-26 21:46:12 +00:00
dftbplus science/dftbplus: Change to python3. 2020-05-20 00:36:40 +00:00
dkh Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
dlib-cpp science/dlib-cpp and science/py-dlib: Update to 19.20 2020-06-23 14:41:29 +00:00
dlpoly-classic science/dlpoly-classic: Change dependency to openmpi3 2020-04-12 14:31:17 +00:00
drawxtl Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
dvc Deprecate a few ports 2020-02-23 15:25:53 +00:00
eccodes Mark as BROKEN on powerpc64: 2020-05-18 03:05:44 +00:00
elk Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
elmerfem science/elmerfem: Prepare for Qt5.15 2020-06-23 15:49:30 +00:00
epte
erd Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
ergo Some days it does not pay to get out of bed. 2020-05-15 04:25:56 +00:00
erkale - Update math/armadillo to 9.870.2 2020-05-06 21:19:22 +00:00
erkale-pseudopotentials science/erkale-pseudopotentials: Update g20190114 -> g20200426 2020-05-07 00:32:03 +00:00
fastcap
fasthenry
fastjet science/fastjet: Enable plugins; Fix the config program 2020-05-26 17:10:15 +00:00
fisicalab Return theraven's ports to the pool after safekeeping his commit bit. 2020-03-05 20:49:05 +00:00
fleur Bump 46 ports depending on math/openblas because the after the recent math/openblas update the library name changed in openblas. 2020-05-06 16:11:14 +00:00
fsom Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
fvcom Bump PORTREVISION for science/netcdf-fortran shlib change 2019-08-31 17:11:57 +00:00
fvcom-mpi - Update net/openmpi to 4.0.3 (openmpi 1 is deprecated) 2020-04-19 09:49:02 +00:00
gabedit Drop dependency on devel/openmp 2020-03-08 21:56:36 +00:00
gamess-us Bump 46 ports depending on math/openblas because the after the recent math/openblas update the library name changed in openblas. 2020-05-06 16:11:14 +00:00
gchemutils Remove textproc/gnome-doc-utils. 2020-01-27 19:40:17 +00:00
gdma Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
getdp - Update to 3.3.0. 2019-12-22 02:28:57 +00:00
ghemical science/ghemical: Not compatible with the upcoming OpenBabel-3 => disable this internal option 2020-05-10 21:40:08 +00:00
ghmm print, science: Add missing USES=gnome 2019-11-08 13:22:59 +00:00
gnudatalanguage x11-toolkits/wxgtk30: Update to 3.0.5.1 2020-05-17 05:55:12 +00:00
gpaw-setups
gramps Convert the tree to use PY_PILLOW 2020-03-24 19:54:57 +00:00
grib_api Mark CONFLICTS_INSTALL between science/eccodes and science/grib_api 2019-08-31 11:21:16 +00:00
gromacs science/gromacs: Fix plist when MPI=on 2020-05-05 01:20:18 +00:00
gsmc print, science: Add missing USES=gnome 2019-11-08 13:22:59 +00:00
gtamsanalyzer
h5utils Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
h5z-zfp science/h5z-zfp: Update 0.9.0 -> 1.0.1 2019-06-30 08:34:58 +00:00
harminv Fix math/openblas and bump dependent ports 2020-01-30 14:17:44 +00:00
hdf Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
hdf5 Revert r529778, ports depending on it were not tested 2020-03-29 20:41:45 +00:00
hdf5-18 Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
healpix Update to 3.47 2019-07-27 11:53:22 +00:00
hepmc3 science/hepmc3: Update science/hepmc3: Update 3.2.1 -> 3.2.2 2020-06-15 04:02:53 +00:00
highfive science/highfiv: Update 2.2 -> 2.2.1 2020-04-29 07:05:09 +00:00
hypre science/hypre: Update 2.18.2 -> 2.19.0 2020-05-27 08:08:16 +00:00
iboview Bump 37 ports depending on math/openblas through USES=blaslapack:openblas because after the recent math/openblas update the library name changed in openblas 2020-05-06 16:39:12 +00:00
InsightToolkit - Update devel/gdcm to 3.0.6. 2020-06-10 19:20:31 +00:00
isaac-cfd Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
jdftx science/jdftx: Update 1.5.0 -> 1.6.0 2020-06-15 20:29:51 +00:00
jmol science/jmol: Update 14.30.2 -> 14.31.0 2020-05-28 17:29:56 +00:00
jstrack Update to version 3.4.0, which includes updated documentation, links to 2019-10-02 16:14:46 +00:00
kalzium Update KDE's Application (release-service) to 20.04.2 2020-06-13 08:14:07 +00:00
kim-api science/kim-api: Update 2.1.2 -> 2.1.3 2019-08-31 14:45:22 +00:00
kst2 science/kst2: prepare for Qt5-5.15 2020-05-18 16:42:25 +00:00
lammps science/lammps: Update 2Jun2020 -> 15Jun2020 2020-06-15 23:33:13 +00:00
lamprop Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
latte science/latte: Update 1.2.1 -> 1.2.2 2020-05-07 01:02:37 +00:00
libaec
libccp4 Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
libcint science/libcint: Update 3.0.19 -> 3.0.20 2020-05-15 15:44:22 +00:00
libctl Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
libefp
libgeodecomp devel/boost-*: update to 1.72.0 2019-12-11 17:53:48 +00:00
libghemical Pet portlint (trailing whitespace). 2019-11-08 03:23:25 +00:00
libgridxc Mark BROKEN 2020-05-16 10:02:19 +00:00
libint science/libint: Update 1-2-1 -> 1-2-1-15 2019-04-28 18:12:59 +00:00
libint2 science/libint2: Update 2.5.0-beta.2-20 -> 2.6.0 2020-01-13 02:54:47 +00:00
libkml Convert REINPLACE_CMD to patch files 2020-05-08 20:50:41 +00:00
liblinear Update to 2.30 2020-06-14 14:22:35 +00:00
libmsym
liboglappth Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
libquantum
libssm Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
libsvm Convert to UCL & cleanup pkg-message (categories s) 2019-08-14 12:16:12 +00:00
libsvm-python Bump a few PORTREVISIONs after r498529 2019-04-10 06:18:31 +00:00
libvdwxc New port: science/libvdwxc: Van der Waals density functional (DFT) library 2019-05-18 05:40:31 +00:00
libxc science/libxc: remove patch 2020-05-02 20:20:28 +00:00
liggghts science/liggghts: Remove the unnecessary VTK_DIR 2020-04-27 16:26:42 +00:00
lm Move devel/swig30 to devel/swig and update to 4.0.1 2020-06-17 18:17:45 +00:00
luscus Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
madness Update devel/tbb to 2020.2 and bump dependent port's revisions 2020-04-01 14:14:51 +00:00
maeparser science/maeparser: Update 1.2.2 -> 1.2.3 2020-03-17 07:19:57 +00:00
massxpert Sanitize COMMENT per Section 5.6 of the FreeBSD Porter's Handbook (part 6). 2020-05-28 08:43:29 +00:00
mbdyn Mark as BROKEN on powerpc64: 2020-05-18 01:38:12 +00:00
mcstas
mcstas-comps Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
mcxtrace
mcxtrace-comps
mdynamix Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
medit Unbreak medit. 2019-11-20 20:40:53 +00:00
metaphysicl science/metaphysicl: 0.5.2 -> 0.6.0 2019-10-13 21:17:17 +00:00
minc2
mmdb2 science/mmdb2: Update 2.0.19 -> 2.0.20 2020-01-13 03:30:45 +00:00
mmtf-cpp Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
mol2ps - Remove compat < 11 dependencies from bootstrap and compiler. It could fix problems 2020-03-06 06:26:05 +00:00
molgif Bump PORTREVISION after r517743 to force relinking. 2019-11-16 12:52:39 +00:00
molscript Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
molsketch Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
mpb Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
mpqc Fix math/openblas and bump dependent ports 2020-01-30 14:17:44 +00:00
msms
multiwfn Bump 46 ports depending on math/openblas because the after the recent math/openblas update the library name changed in openblas. 2020-05-06 16:11:14 +00:00
namd Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
nest Drop dependency on devel/openmp 2020-03-08 21:56:36 +00:00
netcdf Update to 4.7.3 2019-12-08 16:52:27 +00:00
netcdf-cxx Update to 4.3.1 2019-09-12 19:06:48 +00:00
netcdf-fortran Update to 4.5.2 2019-09-26 18:13:09 +00:00
nifticlib science/nifticlib: fix build 2019-06-08 19:24:18 +00:00
nwchem science/nwchem: Update to 7.0.0-release 2020-05-07 07:58:36 +00:00
nwchem-data science/nwchem-data: Update 6.8.1.20190125 -> 7.0.0 2020-05-07 02:54:17 +00:00
octopus Mark BROKEN 2020-05-16 10:03:40 +00:00
openbabel Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
openkim Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
openkim-models Add compiler:c++11-lang to USES to fix build on gcc-based architectures: 2019-08-11 00:13:02 +00:00
opensim-core Move devel/swig30 to devel/swig and update to 4.0.1 2020-06-17 18:17:45 +00:00
opensph Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
opsin science/opsin: Update 3.0.20190208 -> 3.0.20190223 2019-05-11 06:00:09 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter Add NO_ARCH 2020-04-21 19:47:40 +00:00
p5-Geo-Coordinates-Converter-iArea Cosmetic change 2020-04-21 19:37:40 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.117 2020-04-18 08:35:03 +00:00
p5-Mcstas-Tools Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
p5-PerlMol
p5-Physics-Unit
packmol science/packmol: Pack molecules in defined regions of space 2019-09-22 19:06:43 +00:00
pagmo2 science/pagmo2: Update 2.11.4 -> 2.15.0-90 2020-06-10 16:05:16 +00:00
paje
paraview Bump PORTREVISION for devel/protobuf shlib change 2020-06-03 18:32:05 +00:00
pcmsolver science/pcmsolver: fix build on GCC architectures 2019-10-27 19:19:07 +00:00
PETSc Fix math/openblas and bump dependent ports 2020-01-30 14:17:44 +00:00
plumed science/plumed: Broken on i386 2020-05-23 21:59:28 +00:00
pnetcdf - Update net/openmpi to 4.0.3 (openmpi 1 is deprecated) 2020-04-19 09:49:02 +00:00
pulseview science/pulseview: prepare for Qt5-5.15 2020-05-30 10:09:51 +00:00
py-abipy math/py-seaborn: Update to 0.10.1 2020-05-31 21:03:37 +00:00
py-asdf Update to 2.6.0 2020-04-24 18:03:39 +00:00
py-ase science/py-ase: Update 3.19.0 -> 3.19.1 2020-04-04 07:30:04 +00:00
py-avogadrolibs science/py-avogadrolib: Update 1.91.0-107 -> 1.93.0 2020-02-06 07:17:20 +00:00
py-cdo Update to 1.5.3 2019-06-25 20:52:05 +00:00
py-chainer Bump PORTREVISION for devel/protobuf shlib change 2020-06-03 18:32:05 +00:00
py-chainer-chemistry science/py-chainer-chemistry: Update 0.6.0 -> 0.7.0 2019-12-22 03:10:17 +00:00
py-chempy science/py-chempy: Update 0.7.10 -> 0.7.11 2020-05-30 07:28:06 +00:00
py-coards Bump a few PORTREVISIONs after r498529 2019-04-10 06:18:31 +00:00
py-DendroPy Convert to UCL & cleanup pkg-message (categories s) 2019-08-14 12:16:12 +00:00
py-dlib science/dlib-cpp and science/py-dlib: Update to 19.20 2020-06-23 14:41:29 +00:00
py-eccodes-python Update to 0.9.5 2020-01-17 16:40:13 +00:00
py-geolinks Add py-geolinks 0.2.0 2020-01-18 18:23:32 +00:00
py-geomet Add py-geomet 0.2.1 2019-12-29 12:46:17 +00:00
py-geometer Update to 0.2.2 2020-02-17 19:43:41 +00:00
py-gpaw Mark BROKEN 2020-05-17 18:33:45 +00:00
py-GPy science/py-GPy: Change to USES=python because it builds fine with python-3.7 2020-04-08 06:35:03 +00:00
py-GPyOpt science/py-GPyOpt: Update 1.2.5 -> 1.2.6 2020-04-08 06:39:07 +00:00
py-gsd science/py-gsd: Update 1.9.3 -> 1.10.0 2020-01-03 03:58:46 +00:00
py-h5json New port: science/py-h5json: Tools and library for representing HDF5 in JSON 2020-01-26 10:07:36 +00:00
py-h5py Update to 2.10.0 2019-09-07 22:44:39 +00:00
py-kim-query New port: science/py-kim-query: Helper routines for querying the OpenKIM repository 2020-05-03 19:38:33 +00:00
py-kinematics Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-kliff New port: science/py-kliff: KIM-based Learning-Integrated Fitting Framework 2020-05-03 20:58:00 +00:00
py-liac-arff Add py-liac-arff 2.4.0 2020-05-16 10:49:37 +00:00
py-lifelines Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-MDAnalysis Unbreak bulk -a 2020-06-13 15:05:44 +00:00
py-MDAnalysisTests Unbreak bulk -a 2020-06-13 15:05:44 +00:00
py-mdp Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-mlpy Deprecate a few ports 2020-02-23 15:25:53 +00:00
py-mmtf-python
py-molmod science/py-molmod: Update 1.4.7 -> 1.4.8 2020-06-26 01:57:29 +00:00
py-moltemplate science/py-moltemplate: Update 2.17.7 -> 2.17.8 2020-05-29 05:30:36 +00:00
py-netCDF4 Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-obspy - Update to 1.2.1 2020-03-12 03:58:15 +00:00
py-oddt science/py-oddt: Update 0.6 -> 0.7 2019-12-27 05:12:21 +00:00
py-OpenFermion science/py-OpenFermion: Update 0.10.0 -> 0.11.0 2020-04-07 21:49:28 +00:00
py-openpiv science/py-openpiv: 2020-06-20 16:13:45 +00:00
py-paida
py-paramz Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-phono3py Bump 37 ports depending on math/openblas through USES=blaslapack:openblas because after the recent math/openblas update the library name changed in openblas 2020-05-06 16:39:12 +00:00
py-phonopy science/py-phonopy: Update 2.4.2 -> 2.5.0 2020-06-16 16:11:36 +00:00
py-pupynere Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-pyaixi Bump a few PORTREVISIONs after r498529 2019-04-10 06:18:31 +00:00
py-pycsw Add py-pycsw 2.4.2 2020-01-18 18:23:39 +00:00
py-pydicom - Update to 1.4.2 2020-04-22 08:01:18 +00:00
py-PyFR science/py-PyFR: Update 1.9.0 -> 1.10.0 2020-05-29 05:48:10 +00:00
py-pygeodesy
py-pygeometa Add py-pygeometa 0.5.0 2020-01-18 18:23:44 +00:00
py-pygmo2 Add compiler:c++11-lang to USES to fix build on GCC-based systems: 2020-06-11 11:46:10 +00:00
py-pymatgen - Update WWW 2020-05-26 09:32:48 +00:00
py-pymol pymol fails to build with python 2.7 2020-05-29 08:42:46 +00:00
py-pyosf
py-PyQuante Deprecate a few ports 2020-02-23 15:25:53 +00:00
py-pysal Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-pyteomics Add DF, GRAPHICS, TDA, UNIMOD and XML options 2020-05-21 20:44:52 +00:00
py-qcelemental science/py-qcelemental: Update 0.11.0 -> 0.12.0 2020-01-12 21:07:37 +00:00
py-qcengine Move sysutils/py-cpuinfo -> sysutils/py-py-cpuinfo to match the PyPI name 2020-05-18 18:56:59 +00:00
py-qspin Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-quantities science/py-quantities: Update 0.12.3 -> 0.12.4 2020-01-12 07:24:33 +00:00
py-rmf Move devel/swig30 to devel/swig and update to 4.0.1 2020-06-17 18:17:45 +00:00
py-rmsd Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-ruffus science/py-ruffus: Update to 2.8.3 2019-08-15 21:30:19 +00:00
py-scikit-fuzzy science/py-scikit-fuzzy: Change to default python3 2020-05-21 00:20:33 +00:00
py-scikit-learn - Update WWW 2020-06-17 09:35:01 +00:00
py-scikit-optimize Add PLOTS option 2020-04-22 21:28:17 +00:00
py-scikit-sparse Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-scimath Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-scipy Revert r524969 and unbreak bulk -a 2020-02-02 16:40:43 +00:00
py-scoria science/py-scoria: Update 1.0.4 -> 1.0.5 2020-03-28 04:04:51 +00:00
py-SimpleSpectral Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
py-spglib science/py-spglib: Update 1.14.1 -> 1.15.1 2020-05-30 09:17:34 +00:00
py-tensorflow Move devel/swig30 to devel/swig and update to 4.0.1 2020-06-17 18:17:45 +00:00
py-veusz Update py-sip to 4.19.21 and qscintilla2 to 2.11.4 2020-04-11 05:04:40 +00:00
py-ws2300 Deprecate a few ports 2020-02-23 15:25:53 +00:00
pybrain Sanitize COMMENT per Section 5.6 of the FreeBSD Porter's Handbook (part 4). 2020-05-27 15:31:55 +00:00
pynn - Update to 0.9.5 2020-02-22 15:05:40 +00:00
qbox Update science/qbox: 1.71.2 -> 1.71.3 2020-06-15 02:53:07 +00:00
qcl Update devel/readline to 8.0 2019-04-09 14:04:49 +00:00
qiskit-aer science/qiskit-aer: Update 0.5.1 -> 0.5.2 2020-06-06 04:41:55 +00:00
qmcpack Bump 46 ports depending on math/openblas because the after the recent math/openblas update the library name changed in openblas. 2020-05-06 16:11:14 +00:00
quantum-espresso science/quantum-espresso: Update 6.4.1 -> 6.5 2019-12-31 19:32:59 +00:00
quantum-espresso-pseudopotentials Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
qwalk Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
R-cran-AMORE math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-bayesm math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-cmprsk - Update to 2.2-10 2020-06-14 12:16:54 +00:00
R-cran-DCluster math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-e1071 math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-eco math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-Epi math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-epicalc math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-etm math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-FAdist math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-fastICA math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-kernlab math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-snow math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-som math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
R-cran-udunits2 math/R: Update to version 4.0.0 2020-05-05 16:07:53 +00:00
rdkit Convert the tree to use PY_PILLOW 2020-03-24 19:54:57 +00:00
rmf Fix build with hdf5 1.10.6 2020-01-01 16:31:57 +00:00
rubygem-ai4r
rubygem-cdo Update to 1.5.1 2020-05-16 11:04:45 +00:00
rubygem-rgeo Update to 2.1.1 2019-08-28 23:53:27 +00:00
rubygem-rgeo-geojson Cosmetic change 2019-11-03 17:23:27 +00:00
rubygem-rgeo-proj4 Update version requirement of RUN_DEPENDS 2019-08-28 23:53:32 +00:00
rubygem-rgeo-shapefile Update to 2.0.1 2019-04-05 22:45:42 +00:00
rubygem-ruby-dcl Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
rubygem-ruby-netcdf
scidavis science/scidavis: 2020-05-27 20:10:56 +00:00
siesta Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw science/sigrok-firmware-fx2lafw: Update to version 0.1.7 2019-11-15 20:39:58 +00:00
sigrok-firmware-utils
silo Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
simbody Bump 37 ports depending on math/openblas through USES=blaslapack:openblas because after the recent math/openblas update the library name changed in openblas 2020-05-06 16:39:12 +00:00
simgrid science/simgrid: Update 3.24 -> 3.25 2020-05-30 06:16:04 +00:00
simint
simlib
simsmith Sanitize COMMENT per Section 5.6 of the FreeBSD Porter's Handbook (part 6). 2020-05-28 08:43:29 +00:00
smoldyn Add USES=xorg USES=gl, ports categories s 2019-11-07 17:17:53 +00:00
sparta - Update net/openmpi to 4.0.3 (openmpi 1 is deprecated) 2020-04-19 09:49:02 +00:00
spglib science/spglib: Update 1.12.2 -> 1.15.1 2020-05-30 05:58:05 +00:00
step Update KDE's Application (release-service) to 20.04.2 2020-06-13 08:14:07 +00:00
svmlight
szip
teem Clean up LIB_DEPENDS 2019-06-16 16:05:28 +00:00
tfel science/tfel: update to version 3.3 2019-12-21 19:53:14 +00:00
tinker science/tinker: Update 8.7.1 -> 8.7.2 2019-11-29 07:44:51 +00:00
udunits
v_sim Make fetchable again. 2019-11-19 21:38:47 +00:00
vipster science/vipster: Update 1.18b-174 -> 1.18b.20200514 (to the current revision) 2020-05-15 03:46:25 +00:00
vmd Return dbn's ports to the pool after safekeeping his commit bit. 2020-02-03 20:21:08 +00:00
voro++
votca science/votca: Update 1.6 -> 1.6.1 2020-06-24 02:07:28 +00:00
wannier90 science/wannier90: Update 3.0.0 -> 3.1.0 2020-03-08 02:34:49 +00:00
wwplot science/wwplot: Update 0.0.7 -> 0.0.8 2020-01-25 17:53:30 +00:00
wxmacmolplt x11-toolkits/wxgtk30: Update to 3.0.5.1 2020-05-17 05:55:12 +00:00
xcrysden science/xcrysden: Update 1.5.60 -> 1.6.2 2020-05-16 20:16:48 +00:00
xdrawchem Bump PORTREVISION for ports depending on the canonical version of GCC 2019-07-26 20:46:53 +00:00
xfce4-equake-plugin science/xfce4-equake-plugin: fix build on GCC architectures 2019-10-02 14:02:33 +00:00
xtb science/xtb: update to release 6.3.1 2020-06-15 23:23:15 +00:00
yoda science/yoda: Update 1.8.0 -> 1.8.2 2020-05-26 08:52:41 +00:00
Makefile New port: science/py-pygmo2: Python platform to perform parallel computations of optimisation tasks 2020-06-09 18:53:01 +00:00