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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-28 01:06:17 +00:00
freebsd-ports/biology
2005-11-16 04:37:44 +00:00
..
ariadne Add ariadne 1.3, programs to compare protein sequences and 2004-06-22 14:29:59 +00:00
artemis Update to version 7 2005-09-20 14:59:28 +00:00
avida At Kris's request, back out the MACHINE_ARCH spelling correction until 2005-04-12 03:26:56 +00:00
babel - Remove obsolete MASTER_SITES 2004-06-08 08:19:40 +00:00
biojava - Update biology/biojava to 1.30 2004-11-22 15:47:58 +00:00
blast From the PR: 2005-03-18 13:01:07 +00:00
chemeq - Mark it as DEPRECATED - master site disapeared 2005-11-11 14:40:25 +00:00
clustalw
coalesce Fix unfetchable tarball, it was renamed and relocated on original 2005-02-18 12:58:07 +00:00
crimap SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
deft - Mark it as DEPRECATED - master site disapeared 2005-11-11 14:40:32 +00:00
distribfold Drop maintainership 2004-06-24 14:28:12 +00:00
dna-qc
embassy - Update to 2.10.0 2005-05-29 18:26:25 +00:00
emboss Mass-conversion to the USE_AUTOTOOLS New World Order. The code present 2005-11-15 06:52:12 +00:00
fasta With portmgr hat on, reset inactive maintainer. These ports are now up 2004-11-20 08:09:49 +00:00
fasta3 Chase mastersite and fix checksum to unbreak. (Changes are inclusion of a 2004-07-01 03:02:23 +00:00
fastdnaml
finchtv Add finchtv 1.3.0, a chromatogram trace viewer. 2005-03-11 21:16:16 +00:00
flip Mark DEPRECATED since upstream is unmaintained and mastersite is gone. 2005-10-29 14:09:33 +00:00
fluctuate Readd mistakenly removed patch to honour CC/CFLAGS. 2005-02-18 13:41:09 +00:00
garlic At Kris's request, back out the MACHINE_ARCH spelling correction until 2005-04-12 03:26:56 +00:00
genpak
gff2ps [PATCH] biology/gff2ps distsite fix 2004-06-01 02:23:41 +00:00
gperiodic Bump PORTREVISION to chase the glib20 shared library update. 2005-11-05 05:22:06 +00:00
grappa - update grappa to 2.0 2005-04-15 18:48:57 +00:00
hmmer - Remove a junk white space. 2004-11-25 22:58:29 +00:00
kinemage SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
L-Breeder - Mark it as DEPRECATED (mastersite disapeared) 2005-11-11 14:29:09 +00:00
lamarc With portmgr hat on, reset inactive maintainer. These ports are now up 2004-11-20 08:09:49 +00:00
libgenome Mass-conversion to the USE_AUTOTOOLS New World Order. The code present 2005-11-15 06:52:12 +00:00
lsysexp Bump PORTREVISION to chase the glib20 shared library update. 2005-11-05 05:22:06 +00:00
migrate At Kris's request, back out the MACHINE_ARCH spelling correction until 2005-04-12 03:26:56 +00:00
molden o update to 4.3 2005-01-20 03:44:55 +00:00
mopac At Kris's request, back out the MACHINE_ARCH spelling correction until 2005-04-12 03:26:56 +00:00
nab - Fix the packing list [1] 2005-04-29 22:14:29 +00:00
ncbi-toolkit - Update to 20050605 2005-10-11 22:33:34 +00:00
ortep3 - Update MASTER_SITES 2004-06-02 03:32:57 +00:00
p5-AcePerl - Change maintainer's email address. 2005-04-11 20:34:36 +00:00
p5-Bio-ASN1-EntrezGene Add p5-Bio-ASN1-EntrezGene, a Regular expression-based Perl Parser for 2005-10-15 20:09:50 +00:00
p5-Bio-Das Add p5-Bio-Das 1.02, client-side library for Distributed Genome 2005-09-01 13:09:32 +00:00
p5-bioperl - add missing MAN1 and MAN3 2004-09-03 17:04:38 +00:00
paml Update to 3.14b 2005-11-10 01:21:42 +00:00
phylip Bump PORTEPOCH. 3.6 < 3.62 2005-04-22 12:08:12 +00:00
platon At Kris's request, back out the MACHINE_ARCH spelling correction until 2005-04-12 03:26:56 +00:00
povchem After patching, remove the carriage-return characters from povchem.c 2004-04-07 15:39:34 +00:00
primer3 - Update to 1.0.0 2005-06-13 04:31:34 +00:00
psi88 - Fix MASTER_SITES 2004-05-23 07:36:35 +00:00
py-biopython Update to 1.41 2005-11-11 01:15:35 +00:00
pymol Update to 0.9.8 2005-10-10 09:08:22 +00:00
rasmol Update to version 2.7.2.1.1 2004-07-09 18:01:11 +00:00
recombine With portmgr hat on, reset inactive maintainer. These ports are now up 2004-11-20 08:09:49 +00:00
ruby-bio With portmgr hat on, reset maintainership of knu's ports since he has 2005-11-11 01:18:01 +00:00
seaview BROKEN: Size mismatch 2005-11-16 04:37:44 +00:00
seqio SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
sim4
t_coffee BROKEN: Unfetchable 2005-10-28 06:38:35 +00:00
tinker Upgrade to latest revision to make fetchable again. 2004-09-25 08:06:08 +00:00
treepuzzle At Kris's request, back out the MACHINE_ARCH spelling correction until 2005-04-12 03:26:56 +00:00
treeviewx Bump PORTREVISION to chase the glib20 shared library update. 2005-11-05 05:22:06 +00:00
tRNAscan-SE SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
wise SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
xdrawchem Checking MACHINE_ARCH is deprecated. 2005-09-23 16:21:45 +00:00
xmolwt SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
Makefile Remove expired ports 2005-11-05 09:07:44 +00:00