Thierry Thomas 33975deea1 - Unbreak by upgrading to 4.2; ... - Use DIST_SUBDIR because tarball is not versioned; - Add sysdate to PORTVERSION to handle minor revisions; - Do some cleaning.		2004-08-19 22:24:21 +00:00
..
act	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
ariadne	Add ariadne 1.3, programs to compare protein sequences and	2004-06-22 14:29:59 +00:00
artemis	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
avida	Add forgotten patches...	2004-05-21 13:24:56 +00:00
babel	- Remove obsolete MASTER_SITES	2004-06-08 08:19:40 +00:00
biojava
chemeq	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
clustalw
coalesce	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
crimap	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
deft	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
distribfold	Drop maintainership	2004-06-24 14:28:12 +00:00
dna-qc	BROKEN on alpha 5.x: does not compile	2004-02-23 03:54:36 +00:00
emboss	Fix MASTER_SITES:	2004-06-23 08:20:21 +00:00
fasta	Update to fix fetch. Rework PORTVERSION to be more like biology/fasta3	2004-07-01 06:24:01 +00:00
fasta3	Chase mastersite and fix checksum to unbreak. (Changes are inclusion of a	2004-07-01 03:02:23 +00:00
fastdnaml	Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.	2004-02-04 05:21:48 +00:00
flip	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
fluctuate	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
garlic	Make portlint happy by replacing space to tab	2004-05-06 19:49:54 +00:00
genpak	Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.	2004-02-04 05:21:48 +00:00
gff2ps	[PATCH] biology/gff2ps distsite fix	2004-06-01 02:23:41 +00:00
gperiodic	Fix build with gtk 2.4.	2004-04-05 12:59:13 +00:00
grappa	This is now buildable on 5.x, remove BROKEN.	2004-08-17 10:29:40 +00:00
hmmer	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
kinemage	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
L-Breeder	Chase the glib20 update, and bump all affected ports' PORTREVISIONs.	2004-04-05 03:31:02 +00:00
lamarc
libgenome	Apply a big libtool patch to allow porters to use the libtool installed by	2004-07-09 17:43:11 +00:00
lsysexp	biology/lsysexp is not broken	2004-08-18 01:47:39 +00:00
migrate	Update to 1.7.6.1.	2004-06-30 06:55:56 +00:00
molden	BROKEN: Checksum mismatch	2004-06-20 08:40:40 +00:00
mopac	[PATCH] biology/mopac patchsite fix	2004-06-01 08:07:15 +00:00
nab	Update to 4.6	2004-07-02 09:53:25 +00:00
ncbi-toolkit
nclever	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
ortep3	- Update MASTER_SITES	2004-06-02 03:32:57 +00:00
p5-AcePerl	- Honor CFLAGS	2004-04-16 08:08:11 +00:00
p5-bioperl	After devel/p5-File-Temp has gained an IGNORE for PERL_LEVEL > 500800, all	2004-08-12 12:48:01 +00:00
paml	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
phylip	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
platon
povchem	After patching, remove the carriage-return characters from povchem.c	2004-04-07 15:39:34 +00:00
primer3	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
psi88	- Fix MASTER_SITES	2004-05-23 07:36:35 +00:00
py-biopython	BROKEN: Does not build	2004-07-02 08:20:02 +00:00
pymol	Make portlint happy by replacing space to tab	2004-05-06 19:49:54 +00:00
rasmol	Update to version 2.7.2.1.1	2004-07-09 18:01:11 +00:00
recombine	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
ruby-bio	Fix distsite	2004-07-06 14:31:55 +00:00
seaview	unbreak, only minor changes in the distfiles (see PR)	2004-05-18 14:59:02 +00:00
seqio	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
sim4	- Update to version 2003.09.21	2004-03-12 13:53:23 +00:00
spdbv	- Remove long time unresponsive MASTER_SITE	2004-05-22 13:19:02 +00:00
t_coffee	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
tinker	- Unbreak by upgrading to 4.2;	2004-08-19 22:24:21 +00:00
treepuzzle	- Update to 5.2	2004-07-30 22:02:00 +00:00
treeviewx	Chase the glib20 update, and bump all affected ports' PORTREVISIONs.	2004-04-05 03:31:02 +00:00
tRNAscan-SE	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
wise	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
xdrawchem	Add openbabel dependency (bento log forwarded by kris).	2004-04-09 00:59:36 +00:00
xmolwt	SIZEify (maintainer timeout)	2004-03-31 03:12:58 +00:00
Makefile	Add ariadne 1.3, programs to compare protein sequences and	2004-06-22 14:29:59 +00:00