1
0
mirror of https://git.FreeBSD.org/ports.git synced 2024-11-19 00:13:33 +00:00
freebsd-ports/science
2024-09-30 21:36:36 +08:00
..
2d-rewriter
abinit science/abinit: update 10.0.7 → 10.0.9 2024-09-13 01:24:49 -07:00
afni science/afni: update to 24.2.07 2024-09-20 19:51:17 +02:00
agrum science/agrum: update 1.15.0 → 1.15.1 2024-09-16 20:55:23 -07:00
aircraft-datcom
ALPSCore
antioch
apbs
arbor science/arbor: Replace the units bundled lib with external dependency 2024-08-25 17:52:24 -07:00
ascent science/ascent: update 0.9.2 → 0.9.3 2024-09-09 12:09:43 -07:00
atompaw
avogadro2
avogadrolibs
axom
bagel
bddsolve
berkeleygw
bodr
bout++ science/bout++: update 4.4.2 → 5.1.1 2024-09-19 14:05:26 -07:00
bout++-merging-filaments
buddy
cantera science/cantera: update 3.0.0 → 3.0.1 2024-09-16 22:25:01 -07:00
cardioid
cdf
cdk
cdo science/cdo: Update to 2.4.4 2024-09-26 02:21:55 +08:00
cgnslib
cgribex
checkmol */*: Pass to fpc based ports control of ONLY_FOR_ARCHS 2024-09-18 01:22:50 -07:00
chemical-mime-data
chemicalfun
chemps2
chemtool
chemtool-devel
chimes-calculator
ChipmunkPhysics
chrono
cif-tools
clhep
clipper
code_saturne
colt
conduit
coordgenlibs
cp2k */*: Cosmetic changes 2024-09-10 21:09:33 -07:00
cp2k-data science/cp2k{,-data}: update 2024.2 → 2024.3 2024-09-10 19:45:59 -07:00
csvtk
dakota */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
dalton
dd_package
devisor
dftbplus
dftd3
dftd4 science/{,py-}dftd4: update 3.6.0 → 3.7.0 2024-08-31 00:16:14 -07:00
dimod science/{,py-}dimod: update 0.12.16 → 0.12.17 2024-09-05 01:48:47 -07:00
dirac
dkh
dlib-cpp
drawxtl
dssp science/dssp: update 4.4.2 → 4.4.7 2024-09-18 12:45:39 -07:00
dvc
dwave-preprocessing
dynare
eccodes science/eccodes: Update to 2.38.0 2024-09-30 21:36:25 +08:00
elk
elmerfem
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib
gchemutils
gcp science/gcp: update 2.3.1 → 2.3.2 2024-09-09 12:09:43 -07:00
gdma
geant4
gemmi science/{,py-}gemmi: update 0.6.6 → 0.6.7 2024-09-06 23:24:52 -07:00
getdp
ghemical
ghmm
gnudatalanguage graphics/proj: Update to 9.4.1 2024-08-28 08:54:30 +02:00
gpaw-setups
gramps
grib_api
gromacs science/gromacs: update 2024.2 → 2024.3 2024-09-09 18:32:40 -07:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf science/hdf: update 4.2.15 → 4.3.0; add JAVA option 2024-09-24 00:52:09 -07:00
hdf5
hdf5-18
hdf5-110
healpix
helfem
hepmc3
highfive
hypre
iboview
InsightToolkit
InsightToolkit501
isaac-cfd
jdftx
jmol
jstrack
kalzium
kim-api
kplib
kst2 science/kst2: update to 20240825 snapshot 2024-09-04 15:56:20 +03:00
lammps
lamprop
latte
libaec
libccp4
libcifpp science/libcifpp: Add regression workaround that fixes dependencies 2024-09-18 12:45:39 -07:00
libcint
libctl */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
libecpint
libefp
libgetar
libghemical
libgridxc
libint
libint2
libint2-psi4
libkml
liblinear
libmbd
libmsym
libnegf
liboglappth
libpsml science/libpsml: New port: Library to handle pseudopotentials in PSML format 2024-09-02 00:54:42 -07:00
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc
liggghts
linearelasticity
linux-zotero
luscus
m-aneos
madness
maeparser
massxpert
mbdyn
mcpl
mcstas
mcstas-comps
mctc-lib science/mctc-lib: update 0.3.1 → 0.3.2 2024-08-31 00:16:14 -07:00
mcxtrace
mcxtrace-comps
mdynamix
medit
meep science/meep: Add missing Python dependencies 2024-09-22 12:29:54 -07:00
metaphysicl
minc2
mmdb2
mmg
mmtf-cpp
mol2ps */*: Pass to fpc based ports control of ONLY_FOR_ARCHS 2024-09-18 01:22:50 -07:00
molgif
molscript
molsketch
mopac
mp2d
mpb */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
mpqc
mrchem
mrcpp
msms
mstore
multicharge science/multicharge: update 0.2.0 → 0.3.0 2024-08-31 00:16:13 -07:00
multiwfn
mutationpp
namd
ncrystal science/{,py-}ncrystal: update 3.9.6 → 3.9.7 2024-09-25 01:33:35 -07:00
nest
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nlcglib
nwchem science/nwchem: Use proper tarball 2024-09-04 15:11:18 -07:00
nwchem-data science/nwchem{,-data}: update 7.2.2 → 7.2.3 2024-08-30 17:04:48 -07:00
ocean
octopus */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
openbabel
openems
openkim-models
openmc
openmodelica
openmolcas science/openmolcas: Fix build with gcc14 2024-09-05 14:04:30 -07:00
openmx
opensim-core
opensph
opsin
optench
orthanc devel/protobuf: Update to 28.1 2024-09-19 03:10:12 +08:00
orthanc-dicomweb */*: Bump dependencioes after devel/jsoncpp update 2024-09-12 09:20:06 -07:00
orthanc-mysql */*: Bump dependencioes after devel/jsoncpp update 2024-09-12 09:20:06 -07:00
orthanc-postgresql */*: Bump dependencioes after devel/jsoncpp update 2024-09-12 09:20:06 -07:00
orthanc-webviewer */*: Bump dependencioes after devel/jsoncpp update 2024-09-12 09:20:06 -07:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2 */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
paje
paraview devel/protobuf: Update to 28.1 2024-09-19 03:10:12 +08:00
parthenon science/parthenon: Use external kokkos instead of the bundled one 2024-09-09 08:42:54 -07:00
pastix
pcmsolver
PETSc science/PETSc: update 3.21.5 → 3.21.6 2024-09-29 02:31:02 -07:00
phonopy science/{,py-}phonopy: update 2.27.0 → 2.28.0 2024-09-13 01:24:49 -07:00
plumed
pnetcdf
polytope
precice
psi4
pulseview
py-abipy science/py-abipy: update 0.9.6 → 0.9.8 2024-09-16 00:48:27 -07:00
py-access graphics/py-geopandas: Update to 0.14.4 2024-08-28 08:54:30 +02:00
py-arbor science/py-arbor: Fix build by adding missing gmake dependency 2024-09-06 08:58:31 -07:00
py-arch
py-asap3
py-asdf
py-asdf-standard
py-asdf-transform-schemas
py-ase
py-atomium
py-avogadrolibs
py-boutdata
py-boututils
py-cdo
py-cfgrib science/py-cfgrib: Update to 0.9.14.1 2024-09-25 12:22:36 +08:00
py-chainer devel/protobuf: Update to 28.1 2024-09-19 03:10:12 +08:00
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core
py-cirq-google science/py-cirq-google: update 1.3.0 → 1.4.1 2024-08-20 10:51:34 -07:00
py-cirq-ionq science/py-cirq-ionq: update 1.3.0 → 1.4.1 2024-08-20 10:51:34 -07:00
py-cirq-pasqal
py-cirq-rigetti science/py-cirq-rigetti: update 1.3.0 → 1.4.1 2024-08-20 10:51:35 -07:00
py-coards
py-DendroPy
py-dftbplus
py-dftd4 science/{,py-}dftd4: update 3.6.0 → 3.7.0 2024-08-31 00:16:14 -07:00
py-dimod science/{,py-}dimod: update 0.12.16 → 0.12.17 2024-09-05 01:48:47 -07:00
py-dipy
py-dlib
py-dwave-cloud-client
py-dwave-greedy
py-dwave-hybrid
py-dwave-inspector science/py-dwave-inspector: update 0.5.0.post0 → 0.5.1 2024-08-31 00:16:16 -07:00
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk
py-dwave-optimization
py-dwave-preprocessing
py-dwave-samplers
py-dwave-system
py-dwave-tabu
py-dwavebinarycsp
py-earthpy graphics/py-geopandas: Update to 0.14.4 2024-08-28 08:54:30 +02:00
py-eccodes science/py-eccodes: Update to 2.38.0 2024-09-30 21:36:26 +08:00
py-emmet-core
py-esda
py-fresnel
py-gemmi science/{,py-}gemmi: update 0.6.6 → 0.6.7 2024-09-06 23:24:52 -07:00
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd science/py-gsd: update 3.1.1 → 3.3.2 2024-09-16 01:32:39 -07:00
py-h5json
py-h5py
py-h5pyd
py-HepMC3
py-hiphive
py-HofstadterTools
py-hoomd-blue
py-inequality
py-ipygany
py-jupyter_jsmol
py-kim-query
py-kimpy science/py-kimpy: update 2.1.0 → 2.1.1 2024-09-16 00:48:26 -07:00
py-kinematics
py-kliff
py-kpLib
py-liac-arff
py-libgetar
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mercantile
py-meshio
py-mmcif
py-mmtf-python
py-molmod
py-moltemplate
py-mp-api
py-mpcontribs-client
py-mplhep
py-mplhep-data
py-mrchem
py-ncrystal science/{,py-}ncrystal: update 3.9.6 → 3.9.7 2024-09-25 01:33:35 -07:00
py-netCDF4
py-netcdf-flattener
py-nglview
py-nibabel
py-nilearn science/py-nilearn: update 0.10.3 → 0.10.4 2024-09-16 00:48:26 -07:00
py-obspy
py-oddt
py-openbabel
py-openEMS science/py-openEMS: Remove unnecessary line 2024-08-30 10:50:55 -07:00
py-OpenFermion
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking science/py-optking: update 0.2.1 → 0.3.0 2024-09-16 00:48:25 -07:00
py-paida
py-paramz
py-penaltymodel
py-periodictable
py-phono3py
py-phonopy science/{,py-}phonopy: update 2.27.0 → 2.28.0 2024-09-13 01:24:49 -07:00
py-PubChemPy
py-pupynere
py-py3Dmol
py-pyaixi
py-pyberny
py-pycsw graphics/py-OWSLib: Update to 0.31.0 2024-08-28 08:54:29 +02:00
py-pydicom
py-PyFR
py-pygeodesy
py-pygeometa graphics/py-OWSLib: Update to 0.31.0 2024-08-28 08:54:29 +02:00
py-pygmo2 */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
py-pyked
py-pymatgen
py-pymatgen-analysis-alloys
py-pymbd
py-pymol
py-PyNE
py-pyosf
py-pyphot science/py-pyphot: New port: Library for computing photometry from spectra 2024-09-21 22:51:20 -07:00
py-pyprecice
py-pyqubo
py-pysal
py-pyscf science/py-pyscf: update 2.6.2 → 2.7.0 2024-09-27 01:38:48 -07:00
py-pyteomics
py-qcelemental
py-qcengine
py-qspin
py-quantities science/py-quantities: update 0.15.0 → 0.16.0 2024-09-24 01:43:28 -07:00
py-rmf
py-rmsd
py-ruffus
py-sarpy science/py-sarpy: Add py-sarpy 1.3.58 2024-09-05 14:11:20 +08:00
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize science/py-scikit-optimize: Update to 0.10.2 2024-09-30 21:36:36 +08:00
py-scikit-sparse
py-scimath
py-scipy science/py-scipy: Remove unnecessary substitution 2024-09-09 03:43:18 +08:00
py-scoria
py-sdf
py-segregation graphics/py-geopandas: Update to 0.14.4 2024-08-28 08:54:30 +02:00
py-segyio
py-signac
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti
py-spglib science/py-spglib: Remove workaround for the _version_ symbol; Add missing dependency 2024-09-13 01:24:48 -07:00
py-tensorflow */*: Bump dependencioes after devel/jsoncpp update 2024-09-12 09:20:06 -07:00
py-thewalrus
py-tobler graphics/py-geopandas: Update to 0.14.4 2024-08-28 08:54:30 +02:00
py-trainstation
py-trx-python
py-tweedledum
py-vedo
py-veusz
py-xbout
pybrain
pynn
q
qbox
qcl
qiskit-aer
qmcpack
qt6-quick3dphysics Qt6: Update to 6.7.3 2024-09-29 03:05:40 -04:00
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet
qwalk
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071 science/R-cran-e1071: Update to 1.7-16 2024-09-19 09:24:55 +01:00
R-cran-eco
R-cran-Epi science/R-cran-Epi: Update to 2.55 2024-09-16 04:18:33 +00:00
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA science/R-cran-fastICA: drop maintainership 2024-09-14 18:42:16 -04:00
R-cran-kernlab
R-cran-ks
R-cran-snow
R-cran-som science/R-cran-som: Update to 0.3-5.2 2024-09-22 11:04:08 +00:00
R-cran-udunits2
rdkit science/rdkit: Fix fetch by caching unstable font distfile 2024-09-06 23:24:53 -07:00
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4 graphics/proj: Update to 9.4.1 2024-08-28 08:54:30 +02:00
rubygem-rgeo-shapefile
rubygem-ruby-netcdf
salome-configuration
salome-kernel
scidavis
sciplot
segyio
serac
shelxle science/shelxle: update 1.0.1678 → 1.0.1680 2024-09-27 01:38:48 -07:00
siconos
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simple-dftd3 science/simple-dftd3: update 1.1.0 → 1.1.1 2024-09-20 22:01:17 -07:00
simsmith
sirius science/sirius: update 7.5.2 → 7.6.0 2024-08-23 20:45:45 -07:00
smoldyn
sparta science/sparta: update 18Jul2022 → 4Sep2024 2024-09-04 20:01:34 -07:00
spglib
spheral
step
tblite
teem
tfel
tfel-edf
thermofun
tinker
trilinos science/trilinos: update 15-1-1 → 16-0-0 2024-08-23 14:41:05 -07:00
ttk */*: Bump dependencioes after devel/jsoncpp update 2024-09-12 09:20:06 -07:00
tweedledum
udunits
ukrmol+
v_sim
vipster
vmd
voro++
votca science/votca: update 2024.1 → 2024.2 2024-09-30 01:28:25 -07:00
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero science/zotero: Really fix plist 2024-09-08 09:54:46 +02:00
zx
Makefile science/py-pyphot: New port: Library for computing photometry from spectra 2024-09-21 22:51:20 -07:00