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biology/phrab biology/phred biology/consed Although these programs are licensed freely for academic and nonprofit purposes, users have to contact the authors to obtain the tarballs. PR: 191336 Submitted by: mzaki@m.u-tokyo.ac.jp (maintainer)
54 lines
1.4 KiB
Makefile
54 lines
1.4 KiB
Makefile
# $FreeBSD$
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PORTNAME= phrap
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PORTVERSION= 1.090518
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CATEGORIES= biology
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MASTER_SITES= # put the tarball manually
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DISTFILES= distrib.tar.gz
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DIST_SUBDIR= ${PORTNAME}
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MAINTAINER= mzaki@m.u-tokyo.ac.jp
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COMMENT= Phrap is a program for assembling shotgun DNA sequence data
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RESTRICTED= Redistribution is not permitted in any form. You must request the tarball via e-mail. Free for academic use.
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.if defined(PACKAGE_BUILDING)
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IGNORE= distribution files must be obtained via the authors
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.endif
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NO_WRKSUBDIR= yes
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MAKEFILE= makefile
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ALL_TARGET= all
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BINARIES= calf_merge pcluster cross_match loco phrap swat
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SCRIPTS= phrapview
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PORTDATA= BLOSUM50 BLOSUM62 PAM250 mat50 mat70 mb_matrix penalty2 vector.seq
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PORTDOCS= general.doc phrap.doc swat.doc
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.include <bsd.port.pre.mk>
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.for f in ${DISTFILES}
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.if !exists(${DISTDIR}/${DIST_SUBDIR}/${f})
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IGNORE= you must request the source code \(${DISTFILES}\) via e-mail, place it manually in ${DISTDIR}/${DIST_SUBDIR}, and then try it again
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.endif
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.endfor
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do-install:
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.for f in ${BINARIES}
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@${INSTALL_PROGRAM} ${WRKSRC}/${f} ${STAGEDIR}${PREFIX}/bin/
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.endfor
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.for f in ${SCRIPTS}
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@${INSTALL_SCRIPT} ${WRKSRC}/${f} ${STAGEDIR}${PREFIX}/bin/
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.endfor
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@${MKDIR} ${STAGEDIR}${DATADIR}
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.for f in ${PORTDATA}
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@${INSTALL_DATA} ${WRKSRC}/${f} ${STAGEDIR}${DATADIR}
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.endfor
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@${MKDIR} ${STAGEDIR}${DOCSDIR}
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.for f in ${PORTDOCS}
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@${INSTALL_DATA} ${WRKSRC}/${f} ${STAGEDIR}${DOCSDIR}
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.endfor
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.include <bsd.port.post.mk>
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