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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-22 04:17:44 +00:00
freebsd-ports/science
Yuri Victorovich 718a46f76c science/shelxle: Update 1.0.1260 -> 1.0.1264
Reported by:	portscout
2021-05-30 22:06:14 -07:00
..
2d-rewriter
abinit science/abinit: Update 9.4.1 -> 9.4.2 2021-05-06 20:44:02 -07:00
afni science/afni: update to 21.1.08 2021-05-27 07:36:51 +02:00
agrum science/agrum: Update 0.20.1 -> 0.20.2 2021-05-05 22:49:42 -07:00
aircraft-datcom
ALPSCore
antioch
apbs
atompaw
avogadro2
avogadrolibs science/avogadrolibs: Update 1.93.0 -> 1.93.1 2021-05-22 01:33:35 -07:00
axom science/axom: Update 0.4.0 -> 0.5.0 2021-05-16 09:15:43 -07:00
bagel
bddsolve
berkeleygw
bodr
buddy
cdcl Deorbit RESTRICTED && NO_CDROM, part two. 2021-05-06 13:47:48 +02:00
cdf
cdk
cdo
cgnslib
cgribex science/cgribex: Simplify Makefile 2021-05-12 05:47:00 +08:00
checkmol
chemical-mime-data
chemps2
chemtool
chemtool-devel
chrono devel/flatbuffers: Update 1.12.0 -> 2.0.0 2021-05-11 12:49:07 -07:00
clhep
clipper
code_saturne math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
colt
conduit science/conduit: Update 0.7.1 -> 0.7.2 2021-05-19 23:02:27 -07:00
coordgenlibs
cp2k
cp2k-data
crf++
dakota
dalton
dcl Deorbit RESTRICTED && NO_CDROM, part two. 2021-05-06 13:47:48 +02:00
devisor
dftbplus science/dftbplus: fix BROKEN message 2021-05-25 11:06:44 +00:00
dkh
dlib-cpp
drawxtl
dvc
eccodes
elk
elmerfem
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
fisicalab
frontistr
fsom
fvcom Deorbit RESTRICTED && NO_CDROM, part two. 2021-05-06 13:47:48 +02:00
fvcom-mpi
gabedit
gamess-us
gchemutils
gdma
getdp
ghemical
ghmm
gnudatalanguage math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
gpaw-setups
gramps */*: Fix ENOTIME: return my ports to the pool 2021-05-22 10:13:01 +08:00
grib_api
gromacs science/gromacs: Update 2021.1 -> 2021.2 2021-05-06 20:44:01 -07:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
healpix
hepmc3
highfive science/highfive: Update 2.2.2 -> 2.3 2021-05-07 01:59:45 -07:00
hypre science/hypre: Update 2.20.0 -> 2.21.0 2021-05-25 23:59:05 -07:00
iboview
InsightToolkit */*: Fix ENOTIME: return my ports to the pool 2021-05-22 10:13:01 +08:00
isaac-cfd
jdftx
jmol science/jmol: Update 14.31.39 -> 14.31.40 2021-05-27 02:47:01 -07:00
jstrack
kalzium Update KDE Gear to 21.04.1 2021-05-13 19:33:56 +02:00
kim-api
kst2 KDE_INVENT: drop WRKSRC hack 2021-05-07 14:33:22 +02:00
lammps science/lammps: Update 8Apr2021 -> 14May2021 2021-05-15 00:12:32 -07:00
lamprop
latte
libaec
libccp4
libcint
libctl
libecpint
libefp
libgeodecomp
libghemical
libgridxc
libint
libint2
libkml
liblinear
libmsym
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc
liggghts
luscus
madness
maeparser
massxpert
mbdyn math/suitesparse: adapt dependency lines after modularization 2021-05-25 12:00:10 +02:00
mcstas
mcstas-comps
mcxtrace
mcxtrace-comps
mdynamix
medit
metaphysicl
minc2
mmdb2
mmtf-cpp
mol2ps
molgif
molscript
molsketch
mpb
mpqc
msms
multiwfn
namd
nest
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nwchem
nwchem-data
octopus
openbabel
openkim
openkim-models
opensim-core
opensph science/opensph: Add pkg-message 2021-05-30 22:05:32 -07:00
opsin
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol science/p5-Chemistry-Mol: Update to 0.38 2021-05-31 03:55:14 +08:00
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-WebService-Elevation-USGS science/p5-Geo-WebService-Elevation-USGS: Update to 0.119 2021-05-31 03:55:16 +08:00
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2
paje
pcmsolver
PETSc
plumed
pnetcdf
pulseview
py-abipy
py-access
py-asdf Mk: switch PYTHON_REL to 5 digits to support python 3.10.x 2021-05-25 16:55:43 +03:00
py-ase math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
py-avogadrolibs
py-cdo
py-chainer
py-chainer-chemistry
py-chempy math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
py-coards science/py-coards: Cosmetic change 2021-05-12 05:47:18 +08:00
py-DendroPy
py-dipy science/py-dipy: Update 1.4.0 -> 1.4.1 2021-05-06 10:59:23 -07:00
py-dlib
py-eccodes
py-esda
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
py-GPy science/py-GPy: Update 1.9.9 -> 1.10.0 2021-05-22 01:33:34 -07:00
py-GPyOpt
py-gsd
py-h5json
py-h5py Mk: switch PYTHON_REL to 5 digits to support python 3.10.x 2021-05-25 16:55:43 +03:00
py-inequality
py-jupyter_jsmol
py-kim-query
py-kinematics
py-kliff science/py-kliff: Update 0.2.0 -> 0.2.2 2021-05-25 23:59:06 -07:00
py-liac-arff
py-libpysal
py-lifelines
py-MDAnalysis math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
py-MDAnalysisTests
py-mdp
py-mmtf-python
py-molmod
py-moltemplate
py-netCDF4
py-netcdf-flattener
py-nibabel
py-nilearn
py-obspy math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
py-oddt
py-OpenFermion
py-openpiv
py-paida
py-paramz
py-phono3py
py-phonopy
py-pupynere
py-pyaixi
py-pycsw graphics/py-pyproj: Update to 3.1.0 2021-05-27 02:59:53 +08:00
py-pydicom
py-PyFR
py-pygeodesy science/py-pygeodesy: Update to 21.4.21 2021-05-12 05:47:18 +08:00
py-pygeometa
py-pygmo2
py-pymatgen science/py-pymatgen: Update 2022.0.7 -> 2022.0.8 2021-05-10 10:45:56 -07:00
py-pymol
py-pyosf
py-pysal
py-pyteomics science/py-pyteomics: Change RUN_DEPENDS from py-sqlalchemy13 to py-sqlalchemy14 2021-05-12 05:47:18 +08:00
py-qcelemental science/py-qcelemental: Update 0.19.0 -> 0.20.0 2021-05-17 09:16:55 -07:00
py-qcengine science/py-qcengine: Update 0.18.0 -> 0.19.0 2021-05-17 09:16:55 -07:00
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
py-scikit-sparse math/suitesparse: adapt dependency lines after modularization 2021-05-25 12:00:10 +02:00
py-scimath
py-scipy
py-scoria
py-segregation
py-segyio
py-SimpleSpectral
py-skrebate
py-spaghetti
py-spglib
py-tensorflow devel/grpc: Update to 1.38.0 2021-05-26 20:54:17 +08:00
py-tobler
py-veusz
pybrain
pynn
qbox science/qbox: Update 1.73.1 -> 1.73.2 2021-05-05 22:49:41 -07:00
qcl
qiskit-aer
qmcpack
quantum-espresso
quantum-espresso-pseudopotentials
qwalk
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071 science/R-cran-e1071: Update to 1.7-7 2021-05-26 13:01:42 +09:00
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA science/R-cran-fastICA: Update to 1.2-2 and take maintainership 2021-05-10 11:59:19 -04:00
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4 science/rubygem-rgeo-proj4: Update to 3.0.1 2021-05-12 05:47:29 +08:00
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf
scidavis science/scidavis: chase liborigin update 2021-05-12 18:26:59 +03:00
segyio
shelxle science/shelxle: Update 1.0.1260 -> 1.0.1264 2021-05-30 22:06:14 -07:00
siesta science/siesta: Broken on aarch64, powerpc* due to lack of IEEE754 support in gcc 2021-05-18 21:07:41 -07:00
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simsmith
smoldyn science/smoldyn: Update 2.64 -> 2.65 2021-05-21 03:00:48 -07:00
sparta
spglib
step Update KDE Gear to 21.04.1 2021-05-13 19:33:56 +02:00
svmlight
szip
teem
tfel
tfel-edf
thermofun
tinker science/tinker: Update 8.8.3 -> 8.9.1 2021-05-13 16:42:00 -07:00
udunits
v_sim math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
vipster
vmd
voro++
votca
wannier90
wwplot math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
wxmacmolplt
xcrysden science/xcrysden: use default ImageMagick (7) 2021-05-12 21:49:23 +02:00
xdrawchem
xtb
yoda
Makefile