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freebsd-ports/biology
History
Sunpoet Po-Chuan Hsieh 633fcd8a82 - Update to 2.25 
- Sort MAN3 and PLIST
- Pet portlint

Changes:	http://search.cpan.org/dist/Bio-Graphics/Changes
2011-10-02 17:03:33 +00:00
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adun
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ariadne
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artemis
Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon,
2011-07-21 05:03:02 +00:00
avida
Change maintainer address to my FreeBSD address
2011-09-15 12:33:27 +00:00
babel
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belvu
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biococoa
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biojava
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blast
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blat
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boinc-simap
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chemeq
Remove WWW entries from unmaintained ports that return 404 or where the domain
2011-08-02 20:58:23 +00:00
clustalw
Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since
2011-08-11 19:20:17 +00:00
consed
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crux
- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS)
2011-09-23 22:26:39 +00:00
dna-qc
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dotter
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embassy
- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS)
2011-09-23 22:26:39 +00:00
emboss
- kick MD5
2011-07-02 11:33:17 +00:00
fasta
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fasta3
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fastdnaml
- Fix MASTER_SITES and WWW: line
2011-08-26 00:24:48 +00:00
finchtv
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fluctuate
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garlic
Update to 1.6. Web site has been moved.
2011-05-11 05:55:27 +00:00
genpak
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gff2ps
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gmap
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gperiodic
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grappa
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hmmer
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iolib
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jalview
Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon,
2011-07-21 05:03:02 +00:00
lagan
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lamarc
Change maintainer address to my FreeBSD address
2011-09-15 12:33:27 +00:00
libgenome
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libsbml
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linux-foldingathome
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mafft
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mapm3
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migrate
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molden
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mopac
- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS)
2011-09-23 22:26:39 +00:00
mrbayes
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mummer
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muscle
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ncbi-toolkit
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njplot
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ortep3
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p5-AcePerl
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p5-Bio-ASN1-EntrezGene
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p5-Bio-Das
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p5-Bio-Das-Lite
- Fix missing DEPENDS to silence build warnings
2011-09-24 20:45:23 +00:00
p5-Bio-GFF3
- Update to 0.6
2011-09-22 07:34:49 +00:00
p5-Bio-Glite
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p5-Bio-Graphics
- Update to 2.25
2011-10-02 17:03:33 +00:00
p5-Bio-MAGETAB
- Add build depends to silence build warnings
2011-09-25 00:07:08 +00:00
p5-Bio-NEXUS
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p5-Bio-Phylo
- Update to 0.40
2011-08-09 18:26:45 +00:00
p5-Bio-SCF
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p5-bioperl
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p5-bioperl-run
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paml
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phd2fasta
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phrap
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phred
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phylip
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phyml
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platon
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povchem
Switch dependency on povray to povray-meta port.
2011-06-20 22:32:03 +00:00
primer3
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protomol
- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS)
2011-09-23 22:26:39 +00:00
psi88
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py-biopython
- Update to 1.57
2011-05-24 09:06:29 +00:00
pycogent
- Update to 1.5.1
2011-08-11 11:37:18 +00:00
pyfasta
- Update to 0.4.3
2011-06-02 01:38:55 +00:00
pymol
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python-nexus
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rasmol
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recombine
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ruby-bio
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seaview
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seqio
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sim4
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ssaha
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t_coffee
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tinker
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treepuzzle
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treeviewx
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tRNAscan-SE
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velvet
Update to 1.1.04
2011-06-09 16:33:21 +00:00
wise
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xdrawchem
- Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS)
2011-09-23 22:26:39 +00:00
xmolwt
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Makefile
Bye bye abandonwares (part 2)
2011-08-01 04:29:44 +00:00