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freebsd-ports/biology
Dmitry Marakasov 8dbd1070da Velvet is a de novo genomic assembler specially designed for short read
sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino
and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI).

Citation:

Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
D.R. Zerbino and E. Birney. Genome Research 18: 821-829 (2008)

WWW: http://www.ebi.ac.uk/~zerbino/velvet/

PR:		140147
Submitted by:	Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp>
2009-11-07 01:23:59 +00:00
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boinc-simap - Annotate that 8.x no longer needs libmap hack 2009-10-01 07:34:28 +00:00
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crux Update to Crux 1.2.0. 2009-09-19 17:58:13 +00:00
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dotter UNBREAK: Probably was a temporary failure, checksums are ok now. 2009-09-16 15:57:18 +00:00
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velvet Velvet is a de novo genomic assembler specially designed for short read 2009-11-07 01:23:59 +00:00
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Makefile Velvet is a de novo genomic assembler specially designed for short read 2009-11-07 01:23:59 +00:00