Yuri Victorovich 1283acd3c0 science/py-hoomd-blue: update 4.4.1 → 4.6.0 ... Reported by: portscout		2024-03-22 10:14:11 -07:00
..
2d-rewriter
abinit	science/abinit: update 9.10.3 → 9.10.5	2024-02-22 01:38:39 -08:00
afni	science/afni: update to 24.0.16	2024-03-22 17:42:30 +01:00
agrum	science/agrum: update 1.10.0 → 1.12.1	2024-02-19 12:55:25 -08:00
aircraft-datcom
ALPSCore	*/*: bump PORTREVISION after OpenMPI upgrade	2024-02-18 10:29:31 +01:00
antioch
apbs
arbor
ascent
atompaw
avogadro2
avogadrolibs
axom
bagel
bddsolve
berkeleygw
bodr
bout++
bout++-merging-filaments
buddy
cantera
cardioid
cdf
cdk	*/*: properly depend on Maven package	2024-03-11 10:09:45 +01:00
cdo	science/cdo: Update to 2.3.0	2024-02-21 23:06:40 +08:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemicalfun
chemps2
chemtool	science/chemtool: Move man pages to share/man	2024-03-21 12:34:32 +00:00
chemtool-devel
chimes-calculator
ChipmunkPhysics
chrono
cif-tools
clhep
clipper
code_saturne	science/code_saturne: upgrade to 8.1.1	2024-02-23 17:23:28 +01:00
colt
conduit
coordgenlibs
cp2k
cp2k-data
csvtk
dakota
dalton
dd_package
devisor
dftbplus
dftd3
dftd4
dimod
dirac
dkh
dlib-cpp
drawxtl
dssp
dvc
dwave-preprocessing
dynare
eccodes	science/eccodes: Update to 2.34.1	2024-03-09 22:05:26 +08:00
elk	science/elk: update 9.2.12 → 9.4.2	2024-02-21 02:05:12 -08:00
elmerfem	science/elmerfem: support opencascade-7.8.0	2024-03-21 19:01:17 +01:00
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib
gchemutils	science/gchemutils: Moved man to share/man	2024-02-25 13:54:37 +01:00
gcp
gdma
geant4
gemmi	science/{,py-}gemmi: update 0.6.4 → 0.6.5	2024-02-18 02:07:54 -08:00
getdp	science/getdp: Updat to 3.6.0.	2024-03-11 14:32:08 -05:00
ghemical
ghmm
gnudatalanguage
gpaw-setups
gramps	science/gramps: Update to 5.2.0	2024-02-24 10:42:25 +00:00
grib_api
gromacs
gsmc	science/gsmc: Moved man to share/man	2024-02-25 13:54:38 +01:00
gtamsanalyzer
h5utils
h5z-zfp
harminv	science/harminv: Moved man to share/man	2024-02-25 13:54:40 +01:00
hdf
hdf5
hdf5-18
hdf5-110
healpix
helfem
hepmc3
highfive	science/highfive: update 2.8.0 → 2.9.0	2024-03-11 12:16:48 -07:00
hypre
iboview
InsightToolkit
InsightToolkit501
isaac-cfd
jdftx
jmol
jstrack
kalzium
kim-api
kplib
kst2
lammps	*/*: bump PORTREVISION after OpenMPI upgrade	2024-02-18 10:29:31 +01:00
lamprop
latte	*/*: bump PORTREVISION after OpenMPI upgrade	2024-02-18 10:29:31 +01:00
libaec
libccp4
libcifpp
libcint	science/libcint: update 6.1.0 → 6.1.2	2024-03-14 10:44:06 -07:00
libctl
libecpint
libefp
libgetar
libghemical
libgridxc
libint
libint2	science/libint2: update 2.8.2 → 2.9.0	2024-03-06 11:50:16 -08:00
libint2-psi4
libkml
liblinear
libmbd
libmsym
libnegf
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc
liggghts
linux-zotero
luscus
m-aneos
madness
maeparser
massxpert
mbdyn	science/mbdyn: Move man pages to share/man	2024-03-21 12:34:33 +00:00
mcpl
mcstas
mcstas-comps
mctc-lib
mcxtrace	science/mcxtrace: Moved man to share/man	2024-02-25 13:54:42 +01:00
mcxtrace-comps
mdynamix
medit
meep
mercantile
metaphysicl
minc2	science/minc2: Moved man to share/man	2024-02-25 13:54:43 +01:00
mmdb2
mmtf-cpp
mol2ps
molgif
molscript
molsketch
mopac
mp2d
mpb	science/mpb: Move man pages to share/man	2024-03-21 12:34:33 +00:00
mpqc
mrchem
mrcpp
msms
mstore
multicharge
multiwfn
mutationpp
namd
ncrystal
nest
netcdf	science/netcdf: Sort PLIST after 5a058bc79d	2024-02-21 23:06:40 +08:00
netcdf-cxx
netcdf-fortran	science/netcdf-fortran: Update manpage location (003a571d1d, r523104)	2024-02-21 23:06:41 +08:00
nifticlib
nlcglib
nwchem
nwchem-data
ocean	*/*: bump PORTREVISION after OpenMPI upgrade	2024-02-18 10:29:31 +01:00
octopus	science/octopus: Move man pages to share/man	2024-03-21 17:10:16 +00:00
openbabel
openems
openkim-models
openmc
openmodelica	science/openmodelica: update 1.22.0 → 1.22.2	2024-02-22 01:38:41 -08:00
openmolcas
openmx
opensim-core
opensph
opsin	*/*: properly depend on Maven package	2024-03-11 10:09:45 +01:00
optench
orthanc
orthanc-dicomweb
orthanc-mysql
orthanc-postgresql
orthanc-webviewer
p5-Algorithm-SVMLight	science/p5-Algorithm-SVMLight: Mark DEPRECATED	2024-03-14 12:30:00 +01:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2
paje
paraview	science/paraview: upgrade to 5.12.0	2024-03-16 11:06:10 +01:00
pastix
pcmsolver
PETSc	science/PETSc: update 3.20.4 → 3.20.5	2024-03-11 09:20:36 -07:00
phonopy	science/{,py-}phonopy: update 2.21.2 → 2.22.0	2024-03-20 01:59:50 -07:00
plumed
pnetcdf	science/pnetcdf: Update WWW and clean up pkg-descr	2024-03-09 22:05:27 +08:00
polytope
precice
psi4	science/psi4: Convert to USE_PYTHON=pytest	2024-03-09 23:21:39 +08:00
pulseview
py-abipy
py-access
py-arbor
py-arch	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-asap3
py-asdf	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-asdf-standard	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-asdf-transform-schemas	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-asdf-unit-schemas	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-ase
py-atomium
py-avogadrolibs
py-boutdata	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-boututils	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-cdo
py-cfgrib
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core
py-cirq-google
py-cirq-ionq
py-cirq-pasqal
py-cirq-rigetti
py-coards
py-DendroPy
py-dftbplus
py-dftd4
py-dimod
py-dipy
py-dlib
py-dwave-cloud-client	science/py-dwave-cloud-client: update 0.11.2 → 0.11.3	2024-03-04 15:19:09 -08:00
py-dwave-greedy
py-dwave-hybrid	science/py-dwave-hybrid: update 0.6.10 → 0.6.11	2024-03-04 15:19:09 -08:00
py-dwave-inspector
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk	science/py-dwave-ocean-sdk: update 6.8.0 → 6.9.0	2024-03-04 15:19:10 -08:00
py-dwave-preprocessing
py-dwave-samplers
py-dwave-system
py-dwave-tabu
py-dwavebinarycsp
py-earthpy
py-eccodes	science/py-eccodes: Update to 1.7.0	2024-03-09 22:06:14 +08:00
py-emmet-core	science/py-emmet-core: Add NO_ARCH	2024-03-10 03:10:04 +08:00
py-esda	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-fresnel
py-gemmi	science/{,py-}gemmi: update 0.6.4 → 0.6.5	2024-02-18 02:07:54 -08:00
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py
py-HepMC3
py-hiphive
py-hoomd-blue	science/py-hoomd-blue: update 4.4.1 → 4.6.0	2024-03-22 10:14:11 -07:00
py-inequality	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-ipygany
py-jupyter_jsmol	science/py-jupyter_jsmol: Convert to USE_PYTHON=pytest	2024-03-09 23:21:42 +08:00
py-kim-query
py-kimpy
py-kinematics
py-kliff
py-kpLib	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-liac-arff
py-libgetar
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-meshio	science/py-meshio: Convert to USE_PYTHON=pytest	2024-03-09 23:21:44 +08:00
py-mmcif
py-mmtf-python
py-molmod
py-moltemplate
py-mp-api	science/py-mp-api: Add NO_ARCH	2024-03-10 03:10:05 +08:00
py-mpcontribs-client	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-mrchem
py-ncrystal
py-netCDF4
py-netcdf-flattener
py-nglview
py-nibabel
py-nilearn
py-obspy
py-oddt
py-openbabel
py-OpenFermion
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking
py-paida
py-paramz
py-penaltymodel
py-phono3py
py-phonopy	science/{,py-}phonopy: update 2.21.2 → 2.22.0	2024-03-20 01:59:50 -07:00
py-PubChemPy
py-pupynere
py-py3Dmol	science/py-py3Dmol: update 2.0.3 → 2.1.0	2024-03-12 23:17:02 -07:00
py-pyaixi
py-pyberny
py-pycsw
py-pydicom
py-PyFR
py-pygeodesy
py-pygeometa
py-pygmo2	science/py-pygmo2: update 2.19.5 → 2.19.6	2024-02-22 01:38:41 -08:00
py-pyked
py-pymatgen	science/py-pymatgen: Convert to USE_PYTHON=pytest	2024-03-09 23:21:48 +08:00
py-pymatgen-analysis-alloys
py-pymbd
py-pymol
py-PyNE
py-pyosf
py-pyprecice
py-pyqubo
py-pysal
py-pyscf
py-pyteomics	science/py-pyteomics: Convert to USE_PYTHON=pep517	2024-03-09 22:06:14 +08:00
py-qcelemental
py-qcengine
py-qiskit
py-qiskit-aer
py-qiskit-dynamics
py-qiskit-experiments
py-qiskit-finance
py-qiskit-ibm-experiment
py-qiskit-ibm-provider
py-qiskit-ibmq-provider
py-qiskit-nature
py-qiskit-optimization
py-qiskit-terra	lang/rust: Bump revisions after 1.76.0	2024-02-19 12:59:23 +01:00
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-sdf
py-segregation	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-segyio	science/py-segyio: Convert to USE_PYTHON=pytest	2024-03-09 23:21:50 +08:00
py-signac
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-spglib	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-tensorflow	science/py-tensorflow: Mark BROKEN	2024-02-17 07:05:56 +01:00
py-thewalrus
py-tobler
py-trainstation
py-trx-python	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-tweedledum	science/py-tweedledum: Force GCC 12 when GCC is needed	2024-02-21 20:42:35 +00:00
py-vedo
py-veusz
py-xbout	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
pybrain
pynn	science/pynn: Update to 0.12.2	2024-02-23 12:05:11 +00:00
q
qbox	science/qbox: update 1_76_3 → 1_76_4	2024-03-22 05:22:54 -07:00
qcl
qiskit-aer
qmcpack
qt6-quick3dphysics
quantum-espresso	science/quantum-espresso: update 6.7.0 → 7.3.1	2024-03-16 01:05:35 -07:00
quantum-espresso-pseudopotentials	science/quantum-espresso-pseudopotentials: update g20180406 → g20220916	2024-03-16 01:05:36 -07:00
quantum-jet
qwalk
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit	science/rdkit: Clang-17 crashes on FreeBSD 15 amd64	2024-03-17 01:21:51 -07:00
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile
rubygem-ruby-netcdf
salome-configuration	*/*: Replace format=bsdtar with format=ustar in tar archive operations	2024-02-18 17:48:08 -08:00
salome-kernel	*/*: Replace format=bsdtar with format=ustar in tar archive operations	2024-02-18 17:48:08 -08:00
scidavis
sciplot
segyio
serac
shelxle	science/shelxle: update 1.0.1615 → 1.0.1623	2024-03-15 08:46:27 -07:00
siconos
siesta
sigrok-cli	science/sigrok-cli: Moved man to share/man	2024-02-22 14:23:39 +01:00
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simple-dftd3
simsmith
sirius
smoldyn	science/smoldyn: update 2.72 → 2.73	2024-03-11 09:20:40 -07:00
sparta	*/*: bump PORTREVISION after OpenMPI upgrade	2024-02-18 10:29:31 +01:00
spglib
spheral
step
svmlight	science/svmlight: Mark DEPRECATED	2024-03-14 12:29:59 +01:00
tblite
teem
tfel
tfel-edf
thermofun
tinker
trilinos	science/trilinos: update 13-4-1 → 15-1-0	2024-03-06 02:32:59 -08:00
ttk	science/ttk: chase ParaView’s upgrade	2024-03-16 11:06:10 +01:00
tweedledum
udunits
ukrmol+
v_sim	science/v_sim: move man pages	2024-02-23 17:23:08 +01:00
vipster
vmd
voro++	science/voro++: Move man pages to share/man	2024-03-21 17:10:16 +00:00
votca
wannier90
wwplot
wxmacmolplt	science/wxmacmolplt: Move man pages to share/man	2024-03-21 17:10:16 +00:00
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero	science/zotero: Update to 6.0.36	2024-03-18 10:21:38 +01:00
zx
Makefile