mirror of
https://git.FreeBSD.org/ports.git
synced 2024-11-22 00:35:15 +00:00
0149bce295
in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP package). NJplot is especially convenient for rooting the unrooted trees obtained from parsimony, distance or maximum likelihood tree-building methods. The package contains the following programs: njplot - draw phylogenetic trees and interactively modify them newicktops - non-interactive version rendering into a PostScript file newicktotxt - non-interactive version rendering into a text file unrooted - draw unrooted circular trees If you use NJplot in a published work, please cite the following reference: Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for biological sequence banks. Biochimie, 78, 364-369. WWW: http://pbil.univ-lyon1.fr/software/njplot.html PR: ports/118438 Submitted by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
18 lines
857 B
Plaintext
18 lines
857 B
Plaintext
NJplot is a tree drawing program able to draw any phylogenetic tree expressed
|
|
in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
|
|
package). NJplot is especially convenient for rooting the unrooted trees
|
|
obtained from parsimony, distance or maximum likelihood tree-building methods.
|
|
|
|
The package contains the following programs:
|
|
njplot - draw phylogenetic trees and interactively modify them
|
|
newicktops - non-interactive version rendering into a PostScript file
|
|
newicktotxt - non-interactive version rendering into a text file
|
|
unrooted - draw unrooted circular trees
|
|
|
|
If you use NJplot in a published work, please cite the following reference:
|
|
|
|
Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
|
|
biological sequence banks. Biochimie, 78, 364-369.
|
|
|
|
WWW: http://pbil.univ-lyon1.fr/software/njplot.html
|