1
0
mirror of https://git.FreeBSD.org/ports.git synced 2025-01-15 07:56:36 +00:00
freebsd-ports/science
2022-01-18 23:05:13 -08:00
..
2d-rewriter
abinit
afni science/afni: update to 22.0.00 2022-01-13 10:20:51 +01:00
agrum
aircraft-datcom
ALPSCore
antioch math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
apbs
ascent
atompaw
avogadro2
avogadrolibs
axom science/axom: mark BROKEN on powerpc 2021-12-23 22:25:51 +00:00
bagel
bddsolve
berkeleygw
bodr
buddy
cantera science/cantera: For OCTAVE option, fix .mex file path 2021-12-22 01:24:51 -08:00
cdcl
cdf *: Clean up some things 2022-01-17 14:20:25 +01:00
cdk
cdo science/cdo: Update to 2.0.2 2022-01-12 02:44:04 +08:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemicalfun science/chemicalfun: New port: C++ library for working with chemical reactions and formulas 2022-01-18 10:42:45 -08:00
chemps2 science/chemps2: Update 1.8.10 -> 1.8.11 2022-01-12 00:56:35 -08:00
chemtool
chemtool-devel
chimes-calculator science/chimes-calculator: New port: Chebyshev Interaction Model for Efficient Simulation 2022-01-18 23:05:13 -08:00
chrono
clhep
clipper
code_saturne science/PETSc: Update 3.14.1 -> 3.16.3 2022-01-07 00:34:46 -08:00
colt
conduit science/conduit: Update 0.7.2 -> 0.8.0 2021-12-28 09:09:40 -08:00
coordgenlibs
cp2k
cp2k-data
crf++
csvtk science/csvtk: Update to 0.24.0 2021-11-30 18:00:16 -06:00
dakota math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
dalton
dcl
devisor
dftbplus science/dftbplus: Fix tests 2022-01-16 15:30:33 -08:00
dftd4 */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
dkh
dlib-cpp
drawxtl
dvc
dynare finance/py-bitcoin: Remove LICENSE from plist 2022-01-12 13:43:11 -08:00
eccodes
elk science/elk: Update 7.2.42 -> 8.3.15 2022-01-14 08:48:12 -08:00
elmerfem math/vtk9: Update 9.0.3 -> 9.1.0 2021-11-22 01:40:34 -08:00
epte
erd
ergo Fix CONFLICTS entries of multiple ports 2022-01-10 16:15:39 +01:00
erkale math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
erkale-pseudopotentials
fastcap
fasthenry
fastjet
fisicalab math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
fleur science/fleur: Fix typo in USES 2022-01-05 11:55:01 -08:00
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gchemutils
gdma
getdp math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
ghemical
ghmm Fix CONFLICTS entries of multiple ports 2022-01-10 16:15:39 +01:00
gnudatalanguage math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
gpaw-setups
gramps
grib_api
gromacs science/gromacs: Update 2021.4 -> 2021.5 2022-01-15 14:50:02 -08:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
healpix
helfem math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
hepmc3
highfive
hypre
iboview
InsightToolkit
isaac-cfd
jdftx math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
jmol science/jmol: Update 14.32.10 -> 14.32.13 2022-01-18 10:42:45 -08:00
jstrack
kalzium KDE: Update KDE Gear to 21.12.1 2022-01-06 16:38:38 +01:00
kim-api
kst2 math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
lammps
lamprop
latte
libaec
libccp4
libcint science/libcint: Update 4.4.6 -> 5.1.0 2021-12-26 12:21:24 -08:00
libctl
libecpint science/libecpint: Update 1.0.6 -> 1.0.7 2021-12-14 14:41:53 -08:00
libefp
libgeodecomp
libghemical
libgridxc
libint
libint2
libkml
liblinear
libmbd science/libmbd: New port: Many-body dispersion library 2022-01-16 21:15:11 -08:00
libmsym
libnegf science/libnegf: Add options; Correct license 2022-01-17 14:41:21 -08:00
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc science/libxc: update to 5.1.7 2022-01-05 16:50:13 -06:00
liggghts
linux-zotero
luscus
madness
maeparser
massxpert
mbdyn
mcstas
mcstas-comps
mctc-lib */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
mcxtrace
mcxtrace-comps
mdynamix
medit
metaphysicl science/metaphysicl: Update 1.3.2 -> 1.3.3 2021-12-13 09:19:09 -08:00
minc2
mmdb2
mmtf-cpp
mol2ps
molgif
molscript
molsketch
mpb
mpqc science/mpqc: regen plist after doxygen update (+) 2021-12-16 11:49:52 +03:00
msms
mstore */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
multicharge */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
multiwfn
namd
nest math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nwchem
nwchem-data
octopus math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
openbabel */*: Remove redundant '-*' from CONFLICTS definitions 2021-11-25 22:40:11 +01:00
openems
openkim
openkim-models
openmc
openmx
opensim-core
opensph devel/onetbb: Update to 2021.5.0 2022-01-05 17:43:54 +01:00
opsin
orthanc
orthanc-dicomweb
orthanc-mysql
orthanc-postgresql
orthanc-webviewer
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2 devel/onetbb: Update to 2021.5.0 2022-01-05 17:43:54 +01:00
paje
pcmsolver
PETSc science/PETSc: Update 3.14.1 -> 3.16.3 2022-01-07 00:34:46 -08:00
phonopy
plumed math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
pnetcdf
pulseview
py-abipy
py-access
py-asdf science/py-asdf: Update to 2.8.3 2022-01-12 02:44:39 +08:00
py-ase science/py-ase: Update 3.22.0 -> 3.22.1 2022-01-03 23:11:21 -08:00
py-avogadrolibs
py-cdo
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core
py-cirq-google
py-cirq-ionq
py-cirq-pasqal
py-coards
py-DendroPy
py-dipy
py-dlib
py-eccodes science/py-eccodes: Update to 1.4.0 2022-01-12 02:44:40 +08:00
py-esda
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw science/py-gpaw: Update 21.6.0 -> 22.1.0 2022-01-13 02:25:40 -08:00
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py
py-hiphive
py-inequality
py-jupyter_jsmol
py-kim-query
py-kinematics
py-kliff science/py-kliff: Update 0.3.0 -> 0.3.1 2022-01-03 14:26:43 -08:00
py-liac-arff
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mmtf-python
py-molmod
py-moltemplate science/py-moltemplate: Update 2.19.12 -> 2.19.14 2021-12-29 21:15:50 -08:00
py-netCDF4
py-netcdf-flattener
py-nibabel
py-nilearn
py-obspy
py-oddt
py-OpenFermion science/py-OpenFermion: Update 1.2.0 -> 1.3.0 2021-12-23 17:54:58 -08:00
py-OpenMC
py-openpiv
py-paida
py-paramz
py-phono3py
py-phonopy science/py-phonopy: Update 2.11.0 -> 2.12.0 2022-01-14 14:18:03 -08:00
py-PubChemPy
py-pupynere
py-pyaixi
py-pyberny
py-pycsw
py-pydicom
py-PyFR science/py-PyFR: Update 1.12.2 -> 1.12.3 2021-11-21 16:50:13 -08:00
py-pygeodesy
py-pygeometa
py-pygmo2
py-pyked
py-pymatgen science/py-pymatgen: Update 2022.0.15 -> 2022.0.17 2022-01-14 14:18:03 -08:00
py-pymol
py-PyNE
py-pyosf
py-pysal
py-pyscf science/py-pyscf: Unbreak fetch 2022-01-12 20:40:22 -08:00
py-pyteomics
py-qcelemental
py-qcengine science/py-qcengine: Update 0.20.1 -> 0.21.0 2021-11-26 21:26:07 -08:00
py-qspin
py-quantities science/py-quantities: Update 0.12.5 -> 0.13.0 2022-01-14 08:48:13 -08:00
py-rmf science/{,py-}rmf: Update 1.3 -> 1.3.1 2021-12-29 21:15:51 -08:00
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn science/py-scikit-learn: Update to 1.0.2 2021-12-26 12:31:19 +08:00
py-scikit-optimize
py-scikit-sparse
py-scimath
py-scipy science/py-scipy: fix dependency 2022-01-11 22:01:05 +03:00
py-scoria
py-segregation
py-segyio
py-SimpleSpectral
py-skrebate
py-spaghetti
py-spglib
py-tensorflow devel/grpc: Update to 1.42.0 2021-12-22 02:46:21 +08:00
py-tobler
py-veusz
pybrain
pynn science/pynn: Update to 0.10.0 2021-12-17 16:18:50 +08:00
qbox science/qbox: 1.73.3 -> 1.74.1 2022-01-14 08:48:13 -08:00
qcl
qiskit-aer
qmcpack *: Clean up some things 2022-01-17 14:20:25 +01:00
quantum-espresso
quantum-espresso-pseudopotentials
qwalk
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk science/R-cran-cmprsk: Update to 2.2-11 2022-01-09 06:54:19 +00:00
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2 science/R-cran-udunits2: Update to 0.13.2 2022-01-09 08:25:52 +00:00
rdkit science/rdkit: Update 2021.03.5 -> 2021.09.4 2022-01-15 14:50:01 -08:00
rmf science/{,py-}rmf: Update 1.3 -> 1.3.1 2021-12-29 21:15:51 -08:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo science/rubygem-rgeo: Update to 2.3.1 2021-12-22 02:54:32 +08:00
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf
scidavis math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
segyio
shelxle science/shelxle: Update 1.0.1352 -> 1.0.1354 2022-01-12 18:02:54 -08:00
siconos
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo Fix CONFLICTS entries of multiple ports 2022-01-10 16:15:39 +01:00
simbody
simgrid
simint
simlib
simple-dftd3 */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
simsmith
smoldyn
sparta science/sparta: Update 20Oct2021 -> 7Jan2022 2022-01-08 01:09:25 -08:00
spglib
step math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
svmlight
szip
tblite */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
teem
tfel
tfel-edf
thermofun science/thermofun: Update 0.3.8 -> 0.3.9 2022-01-18 10:42:45 -08:00
tinker
udunits
v_sim
vipster
vmd
voro++
votca
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden framework: Add new USES 'magick' for graphics/ImageMagick* 2021-12-11 14:50:53 +01:00
xdrawchem
xtb science/xtb: update to 6.4.1 2021-11-27 11:49:53 -06:00
yoda
Makefile science/chimes-calculator: New port: Chebyshev Interaction Model for Efficient Simulation 2022-01-18 23:05:13 -08:00