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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-22 00:35:15 +00:00
freebsd-ports/science
Dennis Herrmann 2b8a587585 - Update to 1.3.3
PR:		ports/158176
Submitted by:	Roland Smith <rsmith@xs4all.nl> (maintainer)
2011-06-23 10:17:37 +00:00
..
2d-rewriter
2dhf
abinit Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
afni Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
at
avogadro
bblimage Deprecate, no more public distfiles, no more upstream 2011-06-15 07:12:04 +00:00
bddsolve
bft
bodr
brian - Update to 1.3.0 2011-02-21 00:25:05 +00:00
buddy Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
cdcl
cdf Maintainer: stephen@missouri.edu -> stephen@FreeBSD.org 2011-06-14 07:38:51 +00:00
cdo - Update to 1.5.0 2011-04-12 15:17:01 +00:00
cgnslib - Upgrade to 2.5-5. 2011-02-26 10:23:14 +00:00
checkmol - Bump PORTREVISION. lang/fpc has been updated to 2.4.4 2011-06-23 05:39:27 +00:00
chemical-mime-data
chemtool
chemtool-devel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
clhep
colt - Fix fetch error 2011-01-16 01:37:19 +00:00
crf++ Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
dcl
devisor
dtiquery
ecs Chase the upgrade of science/cgnslib to 2.5-5; this implies to 2011-02-26 10:23:19 +00:00
elmer-eio
elmer-hutiter - Fixed fetch of port 2011-02-28 13:46:36 +00:00
elmer-matc
elmer-meshgen2d
elmergrid
elmerpost
epte
euler
fastcap update to 2.0wr-011109 and adopt 2011-03-31 16:20:14 +00:00
fasthenry update to 3.0wr-011109 and adopt 2011-03-31 16:03:03 +00:00
felt Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
flounder Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
fvm Fix the previous commit. 2011-03-01 17:59:32 +00:00
g3data
gamess NO_CDROM is redundant when RESTRICTED is set. 2011-01-24 03:54:45 +00:00
gave
gchemutils Chase both goffice and gnumeric, bump the PORTREVISION. 2011-06-14 03:57:37 +00:00
gdis
gerris Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
getdp Fix build; use print/texinfo for texi2pdf instead of print/teTeX-base. 2011-06-18 17:05:16 +00:00
ghemical - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
ghmm Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gnudatalanguage Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
gramps - Fix plist and unbreak - do not overwrite file installed by shared-mime-info 2010-12-09 14:43:26 +00:00
gromacs Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
gsmc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
gsystem
gtamsanalyzer - drop MD5 2011-04-07 18:26:01 +00:00
gwyddion
h5utils h5utils is a set of utilities for visualization and conversion of 2011-03-18 19:42:35 +00:00
harminv
hdf Mark broken some ports with unfetchable distfiles 2011-06-17 15:37:23 +00:00
hdf5 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
hdf5-18 - Update to 1.8.6 2011-03-12 10:07:53 +00:00
hdf-java Update to 2.7 2011-03-17 17:24:59 +00:00
hs-bio Bump PORTREVISION of all ports dependent on lang/ghc as during 2011-05-26 00:51:15 +00:00
ics Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
InsightToolkit
isaac-cfd
jmol
jstrack - Update maintainer address 2011-06-17 06:46:07 +00:00
kmovisto
kst Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
kst2 Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
lamprop - Update to 1.3.3 2011-06-23 10:17:37 +00:00
libctl - Maintainer ports@freebsd.org to devel@stasyan.com 2011-06-21 02:34:50 +00:00
libghemical Kill EOL whitespace. 2011-06-23 03:07:20 +00:00
libint
libkml
liblinear - Update to 1.8 2011-05-02 12:19:32 +00:00
liboglappth - DISTNAME= ${PORTNAME}-${PORTVERSION} is the default and not needed. 2010-12-29 20:04:42 +00:00
libquantum Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
libsvm - Update to 3.1 [1] 2011-04-24 04:30:35 +00:00
libsvm-python
linsmith - Update to 0.99.21 2011-03-27 17:13:49 +00:00
massxpert - Update to 2.4.3 2011-03-31 06:51:37 +00:00
mayavi - Fix Coredump 2011-03-18 09:59:55 +00:00
mbdyn - Chase ginac shlib bump 2011-03-04 14:08:57 +00:00
mcstas
medit Upgrade to 2011.03.06. 2011-03-07 20:59:00 +00:00
meep - Add optional dependency net/openmpi 2011-06-21 02:19:07 +00:00
minc Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
minc2 Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
mol2ps - Bump PORTREVISION. lang/fpc has been updated to 2.4.4 2011-06-23 05:39:27 +00:00
mpb
mpqc Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
mpqc-mpich
ncs Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
netcdf - Use bsd.port.options.mk 2011-04-12 15:17:09 +00:00
netcdf3-ftn
netcdf4 - Update to 4.1.2 2011-04-12 15:17:17 +00:00
netcdf-ftn
nifticlib
omnetpp
openbabel Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
ovt
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Bond-Find - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Canonicalize - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Elements - Cleaning MD5 in perl@'s ports 2011-05-17 11:14:02 +00:00
p5-Chemistry-File-MDLMol - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-Mopac - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-SMARTS - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-SMILES - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-VRML - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-File-XYZ - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-FormulaPattern - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-InternalCoords - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Isotope - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Mok - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Mol
p5-Chemistry-Pattern - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Reaction - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Chemistry-Ring - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Geo-BUFR BUFR = Binary Universal Form for the Representation of meteorological data. 2011-03-10 06:15:55 +00:00
p5-Geo-Coordinates-Converter - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Geo-Coordinates-Converter-iArea - Add p5-Geo-Coordinates-Converter-iArea 0.14 2011-06-12 16:18:59 +00:00
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS - Update to 0.007 2011-06-12 16:29:21 +00:00
p5-PerlMol - Replace ../../authors in MASTER_SITE_SUBDIR with CPAN:CPANID macro. 2011-06-20 09:03:27 +00:00
p5-Physics-Unit
paje - drop MD5 2011-04-07 18:26:01 +00:00
paraview CMAKE_BUILD_TYPE is set in bsd.cmake.mk now, remove it from Makefiles 2011-04-10 08:48:14 +00:00
peekabot Return these ports to the pool. 2011-03-02 23:59:52 +00:00
pnetcdf Chase the upgrade of MPICH2. 2011-02-26 09:56:51 +00:00
psi3
psychopy - Update to 1.63.03 2011-03-01 09:38:21 +00:00
py-biolccc Update to 1.3.0 2011-03-10 17:01:09 +00:00
py-DendroPy - Update to 3.8.1 2011-06-16 08:07:58 +00:00
py-h5py
py-hcluster
py-mdp - Move to py25 or above 2011-02-25 00:47:51 +00:00
py-mlpy Update math/gsl to 1.15, and adjust PORTREVISION 2011-05-09 16:42:27 +00:00
py-netCDF4 - Update to 0.9.4 2011-06-03 01:25:30 +00:00
py-obspy-core The obspy.core package contains common methods and classes 2011-03-16 08:46:36 +00:00
py-obspy.gse2 - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.mseed - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.signal - Update DEPENDS 2011-03-16 08:51:00 +00:00
py-obspy.wav The obspy.wav package contains methods in order to read and write 2011-03-21 06:28:57 +00:00
py-openbabel
py-paida
py-pydicom
py-scimath - Fix fetch 2011-02-22 01:15:35 +00:00
py-scipy - Move to py25 or above 2011-02-25 00:47:51 +00:00
pybrain
pycdf
pynn
pyvox Deprecate, no more public distfiles, no more upstream 2011-06-15 07:12:04 +00:00
qcl
qtresistors
R-cran-AMORE - update to 2.13.0 2011-05-07 03:29:59 +00:00
R-cran-bayesm - update to 2.13.0 2011-05-07 03:29:59 +00:00
ruby-dcl
ruby-gphys
ruby-netcdf - Update to 0.6.5 2011-02-20 11:31:04 +00:00
rubygem-ai4r AI4R is a collection of ruby algorithms implementations, 2011-03-25 12:08:20 +00:00
silo Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
simlib
svmlight
szip Sync to new bsd.autotools.mk 2010-12-04 07:34:27 +00:00
udunits - Update to 2.1.23 2011-05-25 14:38:41 +00:00
v_sim Fix build with gcc-4.5.2.20101118. 2010-11-25 17:54:06 +00:00
veusz - Move to py25 or above 2011-02-25 00:47:51 +00:00
vis5d+ Maintainer: stephen@missouri.edu -> stephen@FreeBSD.org 2011-06-14 07:38:51 +00:00
vmd - Add files/patch-bin_vmd.csh, files/patch-bin_vmd.sh 2010-12-18 09:24:21 +00:00
x11iraf
xmakemol Bump PORTREVISION after open-mofit update 2011-05-02 12:44:53 +00:00
xmds
Makefile - Add p5-Geo-Coordinates-Converter-iArea 0.14 2011-06-12 16:18:59 +00:00