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freebsd-ports/science
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Mark Felder 5079067642 Move devel/py-icu to devel/py-pyicu 
* PORTNAME devel/py-pyicu should be used rather than devel/py-icu, per policy [1]
* Add LICENSE=MIT as per LICENSE file contained in distfile
* Tidy up MAKE_ENV variable assignment (pet portlint)
* Update WWW in pkg-descr to point to PyPI site, since the old site is down
* Update other ports which depend on devel/py-icu to point to devel/py-pyicu

[1] https://wiki.freebsd.org/Python/PortsPolicy

PR:		207367
Approved by:	maintainer timeout
2016-03-19 17:11:58 +00:00
..
2d-rewriter Cleanup GH_* and variables order. 2015-12-29 14:30:46 +00:00
afni Update to 2015.11.13. 2016-02-27 22:03:29 +00:00
avogadro - Fix build with boost 1.60 2016-02-08 19:15:59 +00:00
bddsolve science/bddsolve: Set environment, use CXXFLAGS, cleanup 2015-02-25 12:01:52 +00:00
bft
bodr Cleanup plist 2014-11-12 18:48:53 +00:00
brian - Update to 1.4.3 2016-03-04 02:06:45 +00:00
buddy Remove Author from pkg-descr and white space fixes 2015-03-02 23:41:59 +00:00
cdcl Cleanup plist 2014-11-12 18:48:53 +00:00
cdf science/cdf: document ncurses requirement (USES+=ncurses) 2016-02-01 06:50:21 +00:00
cdo - Update to 1.7.1 2016-03-06 06:18:56 +00:00
cgnslib - Update to 1.8.15 2015-05-24 08:10:28 +00:00
cgribex - Use INSTALL_TARGET=install-strip instead of STRIP_CMD 2015-01-19 19:51:01 +00:00
checkmol Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
chemical-mime-data - Fix leftover files generated by shared-mime-info 2015-08-14 13:37:02 +00:00
chemtool Cleanup plist 2014-11-12 18:48:53 +00:00
chemtool-devel Cleanup plist 2014-11-12 18:48:53 +00:00
clhep science/clhep: Update version 2.2.0.6=>2.2.0.8 2015-06-17 08:34:24 +00:00
colt
crf++ MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
dcl Cleanup plist 2014-11-12 18:48:53 +00:00
devisor - Switch to options helpers 2015-09-24 21:19:27 +00:00
dlpoly-classic - Update to 1.10.2 2016-02-06 13:45:05 +00:00
ecs - Update to 1.8.15 2015-05-24 08:10:28 +00:00
epte
fastcap Cleanup plist 2014-11-12 18:48:53 +00:00
fasthenry Cleanup plist 2014-11-12 18:48:53 +00:00
fisicalab Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
fvcom - Update maintainer mail address 2015-12-11 08:48:56 +00:00
fvcom-mpi - Update to 1.10.2 2016-02-06 13:45:05 +00:00
fvm - Update to 1.8.15 2015-05-24 08:10:28 +00:00
gchemutils MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
getdp - Update to 2.8.0. 2016-03-11 00:57:24 +00:00
ghemical Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
ghmm - Update to 0.9.r3 2015-09-18 06:16:31 +00:00
gnudatalanguage Upgrade to 0.9.6v2. 2016-01-07 20:48:42 +00:00
gramps Move devel/py-icu to devel/py-pyicu 2016-03-19 17:11:58 +00:00
grib_api - Update to 1.13.1 2015-06-15 14:42:53 +00:00
gromacs - Update to 5.0.6 2015-08-16 21:31:41 +00:00
gsmc Reassign to hamradio@ 2015-08-18 20:37:35 +00:00
gtamsanalyzer Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
gwyddion - Update to 2.44 2016-01-15 15:37:21 +00:00
h5utils - Update to 1.8.15 2015-05-24 08:10:28 +00:00
harminv - Switch to guile2 2015-03-10 20:45:19 +00:00
hdf Reformat port description text and split it into three paragraphs to improve 2015-09-10 17:11:12 +00:00
hdf5 - Convert to new test framework 2015-10-01 15:56:04 +00:00
hs-bio - Update The Glorious Glasgow Haskell Compiler to version 7.10.2 2015-08-20 23:02:14 +00:00
InsightToolkit Update to 4.9.0. 2016-02-12 11:41:39 +00:00
isaac-cfd
jmol Mark a few ports BROKEN: unfetchable 2015-11-09 12:59:03 +00:00
jstrack - Add empty directory to plist, sort plist 2015-09-09 14:53:30 +00:00
kalzium Change header installation location for kdelibs4-based ports. 2016-03-15 12:35:56 +00:00
kst2 Convert my ports to new options helpers 2015-08-25 10:03:08 +00:00
lamprop
libctl science/libctl: update to 3.2.2 2015-01-04 12:56:56 +00:00
libghemical - Upadate biology/mopac to version 1.15 2014-12-16 22:10:23 +00:00
libint - Update to version 1.1.6 2015-10-24 17:55:23 +00:00
libkml - Update BUILD_DEPENDS: remove redundant LOCALBASE/bin 2015-11-04 20:17:14 +00:00
liblinear science/liblinear: Update to version 2.1. 2016-03-09 16:44:37 +00:00
liboglappth Remove trailing whitespace from Makefiles, M-X. 2015-10-08 15:12:22 +00:00
libquantum Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
libsvm science/libsvm: Update to version 3.21. 2016-03-09 16:43:49 +00:00
libsvm-python Remove Author from pkg-descr and white space fixes 2015-03-02 23:41:59 +00:00
libxc Add a port of Libxc, a library of exchange-correlation functionals for 2015-10-26 10:10:10 +00:00
linsmith Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
massxpert Drop USES=iconv. 2015-09-11 09:43:07 +00:00
mbdyn - Use blaslapack 2015-02-05 22:51:22 +00:00
mcstas - Remove unneeded @dir's 2015-12-23 20:39:53 +00:00
mcstas-comps science/mcstats[-comps]: update 2.1 -> 2.2a 2015-11-12 02:29:59 +00:00
medit Fix ports that confused the meaning of WRKDIR and WRKSRC. 2015-11-05 12:36:25 +00:00
meep Fix build. Options helpers cannot be used here. 2015-08-03 17:55:15 +00:00
mei Cleanup plist 2014-11-12 18:48:53 +00:00
metaf2xml science/metaf2xml: update 1.57 -> 1.58 2016-01-04 13:49:17 +00:00
minc2 - Update to 1.8.15 2015-05-24 08:10:28 +00:00
mol2ps Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
mpb - Update to 1.8.15 2015-05-24 08:10:28 +00:00
mpqc - Add missing manpage 2015-10-01 07:04:30 +00:00
mpqc-mpich - Add missing manpage 2015-10-01 07:04:30 +00:00
ncs Upgrade ncs to 2.0.8 with its dependencies. 2015-05-14 17:31:29 +00:00
netcdf science/netcdf: document ncurses requirement (USES+=ncurses) 2016-01-30 22:45:36 +00:00
netcdf-cxx - Use USES=localbase 2015-10-19 20:21:01 +00:00
netcdf-fortran - Update to 4.4.3 2016-01-23 15:14:51 +00:00
nifticlib - Update maintainer mail address 2015-12-11 08:48:56 +00:00
openbabel Convert my ports to new options helpers 2015-08-25 10:03:08 +00:00
openkim - Update maintainer mail address 2015-12-11 08:48:56 +00:00
orthanc Update CMake to 3.5.0. 2016-03-19 14:41:38 +00:00
orthanc-dicomweb Update to 0.2. 2016-03-16 10:38:08 +00:00
orthanc-postgresql Update to 2.0. 2016-03-16 10:38:52 +00:00
orthanc-webviewer Update to 2.1. 2016-03-16 10:39:42 +00:00
p5-Algorithm-SVMLight Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-3DBuilder Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Bond-Find Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Canonicalize Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Elements Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-MDLMol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-Mopac Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-PDB Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SLN Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMARTS Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMILES - Fix shebangs 2015-05-28 18:15:01 +00:00
p5-Chemistry-File-VRML Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-XYZ Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-FormulaPattern Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-InternalCoords Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Isotope Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-MacroMol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-MidasPattern Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Mok Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Chemistry-Mol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Pattern Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Reaction Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Ring Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Geo-BUFR Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Geo-Coordinates-Converter MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
p5-Geo-Coordinates-Converter-iArea - Add NO_ARCH 2015-10-03 17:11:36 +00:00
p5-Geo-ReadGRIB Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.105 2016-01-17 14:09:11 +00:00
p5-Mcstas-Tools Add new port p5-Mcstas-Tools, a general tool for simulating neutron scattering instruments and experiments 2015-11-20 23:34:39 +00:00
p5-PerlMol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Physics-Unit Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
paje Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
paraview Convert to USES=jpeg 2015-06-22 18:33:20 +00:00
pnetcdf - Update to 1.10.2 2016-02-06 13:45:05 +00:00
psychopy - Update to 1.83.04 2016-02-16 02:01:07 +00:00
pulseview - Bump PORTREVISION after libzip update 2015-08-28 10:48:41 +00:00
py-cdo - Update to 1.3.0 2016-01-23 15:14:42 +00:00
py-coards - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-DendroPy Update to 4.0.3 2015-12-25 12:30:50 +00:00
py-h5py - Update to 2.5.0 2015-12-11 20:19:10 +00:00
py-hcluster - Add LICENSE 2015-09-14 12:20:09 +00:00
py-mdp Remove UNIQUENAME and LATEST_LINK. 2015-08-17 14:20:40 +00:00
py-mlpy Canonicalize some dependencies on numpy 2015-01-23 15:21:52 +00:00
py-netCDF4 - Update to 1.8.15 2015-05-24 08:10:28 +00:00
py-obspy - Update to 1.0.0 2016-03-19 09:27:25 +00:00
py-paida - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-pupynere - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-pyaixi - Update to 1.0.4 2015-12-10 13:59:33 +00:00
py-pydap Deprecate ports broken for more than 6 months 2016-03-13 18:45:42 +00:00
py-pydicom - Fix shebangs 2015-06-05 21:10:18 +00:00
py-pysal science/py-pysal: Avoid interactive build possibility 2016-02-07 13:24:18 +00:00
py-pyteomics Rename my ports to comply with Python ports policy 2015-11-02 09:24:50 +00:00
py-pyteomics.biolccc Rename my ports to comply with Python ports policy 2015-11-02 09:24:50 +00:00
py-scikit-fuzzy Fuzzy logic toolkit for SciPy. 2015-12-31 13:41:14 +00:00
py-scikit-learn Update to version 0.17. 2015-12-07 12:05:17 +00:00
py-scikit-sparse - Fix build when using python 3.x 2015-07-26 15:11:39 +00:00
py-scimath - Unbreak 2015-03-14 15:07:54 +00:00
py-scipy - Update to 0.16.1 2015-11-09 18:44:23 +00:00
py-ws2300 - Add missing files to plist 2015-06-05 21:10:48 +00:00
pybrain - Update to 0.3.3 2016-01-19 05:56:29 +00:00
pycdf - Strip library 2015-06-03 16:51:58 +00:00
pynn - Update to 0.8.0 2015-12-11 00:44:01 +00:00
qcl Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk - Add new port: science/R-cran-cmprsk 2015-11-08 05:46:50 +00:00
R-cran-DCluster - Update to 0.2-7 2015-06-13 05:45:48 +00:00
R-cran-e1071 - Update to 1.6-7 2015-08-08 07:13:44 +00:00
R-cran-eco
R-cran-Epi - Update to 2.0 2016-01-26 01:48:17 +00:00
R-cran-epicalc
R-cran-etm - Add new port: science/R-cran-etm 2015-11-08 06:15:14 +00:00
R-cran-snow - Update to 0.4-1 2015-12-06 11:01:46 +00:00
R-cran-som
rubygem-ai4r Set NO_ARCH for remaining rubygem-* ports with no arch dependent files 2015-07-02 16:01:06 +00:00
rubygem-cdo - Update to 1.3.0 2016-01-23 15:14:46 +00:00
rubygem-ruby-dcl science/rubygem-ruby-dcl: Fix category. 2015-03-09 17:36:19 +00:00
rubygem-ruby-netcdf - Move science/rubygem-netcdf to science/rubygem-ruby-netcdf 2015-05-24 15:35:51 +00:00
sigrok-cli - Bump PORTREVISION after libzip update 2015-08-28 10:48:41 +00:00
sigrok-firmware Update ports in the s* categores to not use GH_COMMIT. 2015-05-07 17:41:23 +00:00
sigrok-firmware-fx2lafw cleanup plist 2014-12-20 19:35:10 +00:00
sigrok-firmware-utils Switch default python3 version from 3.3 to 3.4. 2015-01-10 23:15:27 +00:00
silo - Update to 1.8.15 2015-05-24 08:10:28 +00:00
simlib - Strip library 2015-05-17 14:43:37 +00:00
simsmith MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
step Update KDE SC to 4.14.3 2015-03-11 23:11:47 +00:00
svmlight - Add LICENSE 2015-03-07 03:18:42 +00:00
szip - Convert to new test framework 2015-10-01 15:56:21 +00:00
udunits - Update to 2.2.20 2015-10-27 15:50:25 +00:00
v_sim Part 1 of adding USE_GNOME=intltool to ports that require it. 2015-08-02 20:23:55 +00:00
veusz - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
vmd 3 ports categories: Remove $PTHREAD_LIBS 2015-03-24 22:17:41 +00:00
voro++ - Update maintainer mail address 2015-12-11 08:48:56 +00:00
xfce4-equake-plugin - Update to 1.3.8 2015-08-19 04:38:46 +00:00
xmakemol cleanup plist 2014-12-20 19:35:10 +00:00
Makefile Fuzzy logic toolkit for SciPy. 2015-12-31 13:41:14 +00:00