Dirk Meyer 5779dde040 The BioCocoa framework provides developers with the opportunity to add ... support for reading and writing BEAST, Clustal, EMBL, Fasta, GCG-MSF, GDE, Hennig86, NCBI, NEXUS, NONA, PDB, Phylip, PIR, Plain/Raw, Swiss-Prot and TNT files by writing only three lines of code. The framework is written in Cocoa (Objective-C). WWW: http://bioinformatics.org/biococoa/		2006-12-30 09:20:54 +00:00
..
adun	- Local/Tools/Resources now global	2006-12-09 09:40:38 +00:00
ariadne
artemis
avida	Mark as broken for i386 4.x	2006-08-10 23:02:49 +00:00
babel
belvu	Distfile now checksums successfully.	2006-10-14 16:13:49 +00:00
biococoa	The BioCocoa framework provides developers with the opportunity to add	2006-12-30 09:20:54 +00:00
biojava	Reset whitekid@gmail.com after timeouts and no response to email.	2006-12-13 12:56:01 +00:00
blast
blat
boinc-simap	- Add hmmer 5.09 application	2006-10-10 11:31:42 +00:00
chemeq
clustalw
coalesce	- Deprecate	2006-12-10 12:37:38 +00:00
crimap	Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response	2006-12-26 12:46:34 +00:00
distribfold
dna-qc	Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response	2006-12-26 12:46:34 +00:00
dotter	Unmark BROKEN, it seems to be caused by a stale distfile on ftp-master.	2006-08-03 20:28:00 +00:00
embassy
emboss
fasta
fasta3	- Update to 34.t26.b3	2006-10-31 09:02:04 +00:00
fastdnaml
finchtv
fluctuate	- Deprecate	2006-12-10 12:37:38 +00:00
garlic
genpak
gff2ps	- Update to 0.98d	2006-10-06 04:12:59 +00:00
gmap	Add gmap 2006.04.21, a Genomic Mapping and Alignment Program for mRNA	2006-09-29 04:05:55 +00:00
gperiodic	Chase the GNOME X11BASE to LOCALBASE move, and fix the build with the	2006-10-14 08:54:54 +00:00
grappa	Reset dbader@ece.unm.edu due to timeouts and no response to email.	2006-12-13 13:20:20 +00:00
hmmer
jalview
kinemage	- Respect X11BASE	2006-11-27 22:03:22 +00:00
L-Breeder	- Use features of bsd.wx.mk, especially USE_WX	2006-12-01 07:39:02 +00:00
lagan
lamarc
libgenome	- s,INSTALLS_SHLIB,USE_LDCONFIG,g	2006-08-14 10:08:25 +00:00
linux-foldingathome	Folding@Home is a distributed computing project -- people from through out the	2006-08-28 22:33:45 +00:00
lsysexp
mafft
migrate	- Update to 2.1.3	2006-12-10 12:39:32 +00:00
molden	Unbreak: molden has been updated on Aug 17, with the same DISTNAME.	2006-09-17 13:41:56 +00:00
mopac
nab	- Update to 5.1.2	2006-12-23 21:45:17 +00:00
ncbi-toolkit	- Respect X11BASE	2006-12-09 07:49:55 +00:00
ortep3
p5-AcePerl	- Mark broken on amd64 < 6. We got following	2006-12-04 04:13:30 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das	- Update to 1.03	2006-12-19 06:47:45 +00:00
p5-Bio-Phylo	Update to v0.15	2006-12-27 18:58:26 +00:00
p5-bioperl
p5-bioperl-devel
p5-bioperl-run
p5-bioperl-run-devel
paml
phylip	Reset dbader@ece.unm.edu due to timeouts and no response to email.	2006-12-13 13:20:20 +00:00
platon
povchem
primer3	- Update to 1.0.1	2006-12-29 23:40:53 +00:00
protomol
psi88
py-biopython	- Update to 1.42	2006-10-31 13:25:21 +00:00
pymol	Fix build on amd64	2006-09-17 11:51:56 +00:00
rasmol
recombine	- Deprecate	2006-12-10 12:37:38 +00:00
ruby-bio
seaview	Chase pdf library and bump PORTREVISION.	2006-10-09 08:18:35 +00:00
seqio	Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response	2006-12-26 12:46:34 +00:00
sim4
t_coffee
tinker
treepuzzle
treeviewx	- Allow wxWidgets 2.6 alongside 2.4, this port works with both	2006-10-09 07:16:37 +00:00
tRNAscan-SE
wise	Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response	2006-12-26 12:46:34 +00:00
xdrawchem
xmolwt
Makefile	The BioCocoa framework provides developers with the opportunity to add	2006-12-30 09:20:54 +00:00