Martin Wilke 727fa1d184 - Update to 6.2.05 ...

PR:		179061
Submitted by:	Ports Fury

2013-05-29 05:25:49 +00:00

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adun

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ariadne

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artemis

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avida

Convert USE_NCURSES by USES=ncurses

2013-05-06 15:34:17 +00:00

babel

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biococoa

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biojava

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blast

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blat

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boinc-simap

Use bsd.port.options.mk instead of bsd.port.{pre|post}.mk

2013-04-29 12:20:35 +00:00

chemeq

Convert USE_BISON to USES= bison

2013-03-08 11:32:11 +00:00

clustalw

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consed

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crux

- adoption of optionsNG

2013-03-18 06:48:55 +00:00

dotter

- Mark broken checksum mismatch

2013-03-25 01:41:31 +00:00

embassy

- Convert USE_ICONV=yes to USES=iconv

2013-04-27 08:50:46 +00:00

emboss

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fasta

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fasta3

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fastdnaml

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finchtv

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fluctuate

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garlic

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genpak

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gff2ps

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gmap

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gperiodic

- Convert USE_GETTEXT to USES (part 3)

2013-04-24 18:10:30 +00:00

grappa

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hmmer

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iolib

- Update to 1.13.0

2013-04-30 15:41:49 +00:00

jalview

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lagan

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lamarc

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libgenome

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libsbml

- adoption of optionsNG

2013-03-18 06:50:12 +00:00

linux-foldingathome

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mafft

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mapm3

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migrate

- Update to 3.5.1

2013-05-26 07:49:47 +00:00

molden

- Update to 5.0.6

2013-04-26 06:57:37 +00:00

mopac

Workaround the way mopac installs executables.

2013-04-29 17:30:09 +00:00

mrbayes

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mummer

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muscle

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ncbi-toolkit

- Update to 2012.06.20

2013-03-14 05:27:58 +00:00

njplot

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ortep3

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p5-AcePerl

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p5-Bio-ASN1-EntrezGene

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p5-Bio-Das

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p5-Bio-Das-Lite

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p5-Bio-GFF3

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p5-Bio-Glite

For perl@ owned ports:

2013-03-29 00:44:53 +00:00

p5-Bio-Graphics

Add missing item to pkg-plist reported by QAT but not reported by poudriere.

2013-03-03 15:22:43 +00:00

p5-Bio-MAGETAB

For perl@ owned ports:

2013-03-29 00:44:53 +00:00

p5-Bio-NEXUS

For perl@ owned ports:

2013-03-29 00:44:53 +00:00

p5-Bio-Phylo

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p5-Bio-SCF

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p5-bioperl

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p5-bioperl-run

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paml

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phd2fasta

Remove unneeded escaping

2013-04-26 16:23:13 +00:00

phrap

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phred

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phylip

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phyml

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platon

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plink

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plinkseq

Fix build with protobuf-2.5.0

2013-03-21 14:09:22 +00:00

povchem

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primer3

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protomol

- adoption of optionsNG

2013-03-18 06:54:39 +00:00

psi88

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py-biopython

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pycogent

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pyfasta

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pymol

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python-nexus

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rasmol

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recombine

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ruby-bio

- adoption of optionsNG

2013-03-18 06:55:42 +00:00

seaview

- Update to 4.4.1

2013-03-26 01:08:40 +00:00

seqan

- convert USE_CMAKE to USES

2013-03-22 20:06:14 +00:00

seqio

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sim4

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ssaha

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t_coffee

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tinker

- Update to 6.2.05

2013-05-29 05:25:49 +00:00

treepuzzle

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treeviewx

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tRNAscan-SE

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ugene

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velvet

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wise

Fix build by adding an explicit dep on pkgconf

2013-05-03 20:48:34 +00:00

xdrawchem

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xmolwt

Finish converting the whole ports tree to USES=pkgconfig

2013-04-23 14:20:25 +00:00

Makefile

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