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freebsd-ports/science
History
Rene Ladan 5ada0d0b07 Remove expired ports: 
2014-12-27 games/secretmaryochronicles-music: Depends on expiring games/secretmaryochronicles
2014-12-27 science/mpb: Broken for more than 6 months
2014-12-27 x11-fm/pbi-thumbnailer: Broken for more than 6 months
2014-12-27 00:24:47 +00:00
..
2d-rewriter
Cleanup plist
2014-11-12 18:48:53 +00:00
afni
Cleanup plist
2014-11-12 18:48:53 +00:00
avogadro
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
bddsolve
Cleanup plist
2014-11-12 18:48:53 +00:00
bft
Add USES=libtool and INSTALL_TARGET=install-strip
2014-07-08 15:24:14 +00:00
bodr
Cleanup plist
2014-11-12 18:48:53 +00:00
brian
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
buddy
Cleanup plist
2014-11-12 18:48:53 +00:00
cdcl
Cleanup plist
2014-11-12 18:48:53 +00:00
cdf
Cleanup plist
2014-11-12 18:48:53 +00:00
cdo
Replace USES=libtool:oldver with USES=libtool or USES=libtool:keepla in
2014-12-08 16:48:38 +00:00
cgnslib
Cleanup plist
2014-11-12 18:48:53 +00:00
cgribex
…
checkmol
…
chemical-mime-data
Split devel/gettext in devel/gettext-runtime and devel/gettext-tools. The
2014-11-29 18:22:32 +00:00
chemtool
Cleanup plist
2014-11-12 18:48:53 +00:00
chemtool-devel
Cleanup plist
2014-11-12 18:48:53 +00:00
clhep
Cleanup plist
2014-11-12 18:48:53 +00:00
colt
Remove NOPORTDOCS and NOPORTEXAMPLES.
2014-07-04 22:08:14 +00:00
crf++
Reset maintainership:
2014-12-02 22:40:56 +00:00
dcl
Cleanup plist
2014-11-12 18:48:53 +00:00
devisor
Cleanup plist
2014-11-12 18:48:53 +00:00
dlpoly-classic
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
ecs
Upgrade to version 2.0.3.
2014-09-14 14:42:20 +00:00
epte
…
fastcap
Cleanup plist
2014-11-12 18:48:53 +00:00
fasthenry
Cleanup plist
2014-11-12 18:48:53 +00:00
fisicalab
Cleanup plist
2014-11-12 18:48:53 +00:00
fvcom
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
fvcom-mpi
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
fvm
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
gchemutils
Cleanup plist
2014-11-12 18:48:53 +00:00
getdp
Cleanup plist
2014-11-12 18:48:53 +00:00
ghemical
- Upadate biology/mopac to version 1.15
2014-12-16 22:10:23 +00:00
ghmm
Reset maintainership:
2014-12-02 22:40:56 +00:00
gnudatalanguage
Bump portrevision after png update
2014-12-25 20:54:41 +00:00
gramps
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
grib_api
Bump portrevision after png update
2014-12-25 20:54:41 +00:00
gromacs
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
gsmc
- Fix missing library problems when the linker enforces explicit linking
2014-08-26 14:06:08 +00:00
gtamsanalyzer
Cleanup plist
2014-11-12 18:48:53 +00:00
gwyddion
- Update to version 2.38
2014-11-02 17:43:03 +00:00
h5utils
Bump portrevision after png update
2014-12-25 20:54:41 +00:00
harminv
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
hdf
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
hdf5
…
hdf-java
Cleanup plist
2014-11-12 18:48:53 +00:00
hs-bio
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
InsightToolkit
Cleanup plist
2014-11-12 18:48:53 +00:00
isaac-cfd
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
jmol
Cleanup plist
2014-11-12 18:48:53 +00:00
jstrack
Change my non-FreeBSD MAINTAINER mail to bofh@
2014-12-24 00:14:11 +00:00
kalzium
KDE/FreeBSD team presents KDE SC 4.14.2 and KDE Workspace 4.11.13!
2014-10-19 15:57:27 +00:00
kst2
science/kst2:
2014-11-13 14:26:54 +00:00
lamprop
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
libctl
Cleanup plist
2014-11-12 18:48:53 +00:00
libghemical
- Upadate biology/mopac to version 1.15
2014-12-16 22:10:23 +00:00
libint
science: Fix mpqc, libint and unbreak ghemical, and libghemical atomically
2014-09-25 11:04:02 +00:00
libkml
Cleanup plist
2014-11-12 18:48:53 +00:00
liblinear
Update "BSD" license in science category
2014-12-07 15:17:10 +00:00
liboglappth
Cleanup plist
2014-11-12 18:48:53 +00:00
libquantum
Convert to USES=libtool
2014-07-08 13:34:32 +00:00
libsvm
Update "BSD" license in science category
2014-12-07 15:17:10 +00:00
libsvm-python
…
linsmith
Cleanup plist
2014-11-12 18:48:53 +00:00
massxpert
Bump portrevision after png update
2014-12-25 20:54:41 +00:00
mbdyn
Cleanup plist
2014-11-12 18:48:53 +00:00
medit
cleanup plist
2014-12-20 19:35:10 +00:00
meep
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
mei
Cleanup plist
2014-11-12 18:48:53 +00:00
metaf2xml
Reset maintainership:
2014-12-02 22:40:56 +00:00
minc2
Update "BSD" license in science category
2014-12-07 15:17:10 +00:00
mol2ps
cleanup plist
2014-12-20 19:35:10 +00:00
mpqc
Cleanup plist
2014-11-12 18:48:53 +00:00
mpqc-mpich
Stage science/mpqc and science/mpqc-mpich
2014-09-08 00:20:03 +00:00
ncs
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
netcdf
Cleanup plist
2014-11-12 18:48:53 +00:00
netcdf-cxx
- Use USE_GITHUB
2014-08-15 17:27:48 +00:00
netcdf-fortran
- Update to 4.4.1
2014-09-13 15:19:28 +00:00
nifticlib
…
openbabel
Cleanup plist
2014-11-12 18:48:53 +00:00
openkim
Cleanup plist
2014-11-12 18:48:53 +00:00
p5-Algorithm-SVMLight
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-3DBuilder
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Bond-Find
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Canonicalize
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Elements
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-MDLMol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-Mopac
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-PDB
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SLN
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMARTS
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMILES
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-VRML
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-File-XYZ
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-FormulaPattern
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-InternalCoords
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Isotope
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-MacroMol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-MidasPattern
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Mok
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Mol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Pattern
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Reaction
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Chemistry-Ring
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-BUFR
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-Coordinates-Converter
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-Coordinates-Converter-iArea
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-ReadGRIB
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Geo-WebService-Elevation-USGS
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-PerlMol
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
p5-Physics-Unit
Change the way Perl modules are installed, update the default Perl to 5.18.
2014-11-26 13:08:24 +00:00
paje
Cleanup plist
2014-11-12 18:48:53 +00:00
paraview
Bump portrevision after png update
2014-12-25 20:54:41 +00:00
pnetcdf
- Update net/openmpi to 1.8.4
2014-12-26 14:24:12 +00:00
psychopy
- Update to 1.81.02
2014-11-08 23:45:16 +00:00
pulseview
science/pulseview: Remove unnecessary RUN_DEPENDS
2014-08-03 16:16:21 +00:00
py-cdo
- Add py-cdo 1.2.3
2014-09-13 15:18:32 +00:00
py-coards
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-DendroPy
Cleanup plist
2014-11-12 18:48:53 +00:00
py-h5py
Update "BSD" license in science category
2014-12-07 15:17:10 +00:00
py-hcluster
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-mdp
Change my non-FreeBSD MAINTAINER mail to bofh@
2014-12-24 00:14:11 +00:00
py-mlpy
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-netCDF4
Change my non-FreeBSD MAINTAINER mail to bofh@
2014-12-24 00:14:11 +00:00
py-obspy
Fix compilation after recent numpy patch.
2014-10-23 15:23:27 +00:00
py-paida
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-pupynere
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-pyaixi
Canonicalize a few licenses
2014-12-07 00:07:47 +00:00
py-pydap
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-pydicom
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-pysal
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
py-scikit-learn
Explicitly link with libblas to avoid errors like
2014-10-30 11:52:48 +00:00
py-scimath
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
py-scipy
Fix build after r369447
2014-09-30 08:39:34 +00:00
py-ws2300
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
pybrain
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
pycdf
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
pynn
Cleanup plist
2014-11-12 18:48:53 +00:00
pyteomics
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
pyteomics.biolccc
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
qcl
- Fix build with clang by using std::vector instead of variable size array of non-POD type
2014-09-04 18:43:58 +00:00
qtresistors
…
R-cran-AMORE
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-bayesm
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-DCluster
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-e1071
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-eco
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-Epi
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-epicalc
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-snow
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
R-cran-som
Update the default version of GCC in the Ports Collection from GCC 4.7.4
2014-09-10 20:50:31 +00:00
rubygem-ai4r
science/rubygem-ai4r: update to 1.13
2014-08-23 21:52:50 +00:00
rubygem-cdo
- Add rubygem-cdo 1.2.3
2014-09-13 15:18:54 +00:00
rubygem-netcdf
…
sigrok-cli
science/sigrok-cli: update to 0.5.0
2014-07-28 23:06:29 +00:00
sigrok-firmware
Add new port: science/sigrok-firmware
2014-08-03 22:37:51 +00:00
sigrok-firmware-fx2lafw
cleanup plist
2014-12-20 19:35:10 +00:00
sigrok-firmware-utils
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
silo
- Update to 4.10
2014-09-12 23:32:38 +00:00
simlib
Stagify.
2014-06-10 15:07:59 +00:00
simsmith
Java based Smith chart program. Performs single-frequency and sweep charting
2014-07-03 21:02:10 +00:00
step
KDE/FreeBSD team presents KDE SC 4.14.2 and KDE Workspace 4.11.13!
2014-10-19 15:57:27 +00:00
svmlight
Cleanup plist
2014-11-12 18:48:53 +00:00
szip
…
udunits
- Update to 2.2.17
2014-09-03 19:09:22 +00:00
v_sim
Upgrade to 3.7.2.
2014-12-22 14:36:52 +00:00
veusz
- Convert ports of science/ and security to new USES=python
2014-10-24 16:50:42 +00:00
vmd
Cleanup plist
2014-11-12 18:48:53 +00:00
voro++
Cleanup plist
2014-11-12 18:48:53 +00:00
xfce4-equake-plugin
- Update to 1.3.6
2014-11-15 10:50:32 +00:00
xmakemol
cleanup plist
2014-12-20 19:35:10 +00:00
Makefile
Remove expired ports:
2014-12-27 00:24:47 +00:00