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freebsd-ports/biology
Sunpoet Po-Chuan Hsieh 69210a7789 - Update to 0.78
- Sort TEST_DEPENDS, MAN1, MAN3 and PLIST

Changes:	http://search.cpan.org/dist/Bio-NEXUS/doc/changes.txt
2012-02-11 02:04:41 +00:00
..
adun - fix build with gcc46 2012-02-07 05:36:27 +00:00
ariadne
artemis
avida
babel
belvu
biococoa
biojava
blast
blat
boinc-simap
chemeq
clustalw
consed
crux
dna-qc
dotter
embassy
emboss
fasta
fasta3
fastdnaml
finchtv
fluctuate
garlic
genpak
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview
lagan
lamarc - The proper acronym for Apache Software License 2 is really AL2 2012-01-09 15:41:08 +00:00
libgenome
libsbml
linux-foldingathome
mafft
mapm3
migrate
molden
mopac
mrbayes
mummer - Update to 3.23 2012-01-17 00:51:39 +00:00
muscle
ncbi-toolkit
njplot
ortep3
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450 2012-01-21 17:40:15 +00:00
p5-Bio-Graphics - Update to 2.26 2012-02-11 02:04:24 +00:00
p5-Bio-MAGETAB - Update to 1.22 2012-02-09 03:28:51 +00:00
p5-Bio-NEXUS - Update to 0.78 2012-02-11 02:04:41 +00:00
p5-Bio-Phylo
p5-Bio-SCF At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450 2012-01-21 17:40:15 +00:00
p5-bioperl At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450 2012-01-21 17:40:15 +00:00
p5-bioperl-run At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450 2012-01-21 17:40:15 +00:00
paml
phd2fasta
phrap
phred
phylip
phyml
platon
povchem
primer3 - Respect CC 2012-01-27 17:41:00 +00:00
protomol
psi88
py-biopython
pycogent
pyfasta
pymol
python-nexus - Update to 0.87 2011-12-23 08:05:00 +00:00
rasmol
recombine
ruby-bio
seaview Chase pdflib.so version and bump PORTREVISION accordingly. 2012-01-10 11:41:37 +00:00
seqio
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE
velvet
wise
xdrawchem
xmolwt
Makefile