Martin Wilke 9146c80d02 - Update maintainer mail address ...

- Update/Remove MASTER_SITE

PR:		204755
Submitted by:	 jwbacon@tds.net (maintainer)
Approved by:	mat (mentor)
Differential Revision:	D4493

2015-12-11 08:48:56 +00:00

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ariadne

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artemis

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avida

- Unbreak on PowerPC by using atomicops implementation for Linux and GCC

2015-09-02 12:29:09 +00:00

babel

Unbreak the build on PowerPC (at least) by always using va_copy() macro for

2015-09-02 10:10:06 +00:00

bcftools

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biococoa

Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source.

2015-09-19 10:33:34 +00:00

biojava

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blat

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bwa

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

cd-hit

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

cdbfasta

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

chemeq

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clustalw

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consed

Deprecate ports broken for more than 6 months

2015-10-25 19:35:28 +00:00

crux

Unbreak the build on PowerPC, it had nothing to do with "error in pthreads":

2015-09-02 09:23:05 +00:00

emboss

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fasta

- Do not falsely advertise that PowerPC build runs out of space and fails

2015-09-02 10:35:25 +00:00

fasta3

- Update to 36.3.8

2015-10-16 13:31:10 +00:00

fastdnaml

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fastool

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

fasttree

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

fastx-toolkit

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

fluctuate

- Switch to options helpers

2015-11-19 00:51:15 +00:00

garlic

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gff2ps

Fix ports that confused the meaning of WRKDIR and WRKSRC.

2015-11-05 12:36:25 +00:00

gmap

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

gperiodic

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grappa

biology/grappa: define license (GPLv2)

2015-09-25 18:55:08 +00:00

hmmer

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

htslib

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iolib

- Update to 1.14.6

2015-11-09 16:02:13 +00:00

jalview

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lagan

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lamarc

Remove ansi version fo wxGTK 2.8 and only keep the unicode version

2015-09-16 19:51:26 +00:00

libgtextutils

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

libsbml

- Add LICENSE_FILE

2015-10-14 23:51:20 +00:00

linux-foldingathome

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mafft

Use BROKEN helpers

2015-06-27 14:30:19 +00:00

mapm3

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migrate

- Update options

2015-06-28 15:30:41 +00:00

molden

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mopac

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mrbayes

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mummer

Fix build on mips by properly respecting compiler and flags

2015-08-05 12:18:41 +00:00

muscle

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ncbi-blast+

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

ncbi-toolkit

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p5-AcePerl

Make it so that the default Perl is always called perl5.

2015-09-14 12:19:48 +00:00

p5-Bio-ASN1-EntrezGene

Start removing MASTER_SITE_SUBDIR=CPAN:username where possible. The

2015-06-24 15:16:23 +00:00

p5-Bio-Das

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p5-Bio-Das-Lite

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p5-Bio-GFF3

Make it so that the default Perl is always called perl5.

2015-09-14 12:19:48 +00:00

p5-Bio-Glite

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p5-Bio-Graphics

Make it so that the default Perl is always called perl5.

2015-09-14 12:19:48 +00:00

p5-Bio-MAGETAB

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p5-Bio-NEXUS

Make it so that the default Perl is always called perl5.

2015-09-14 12:19:48 +00:00

p5-Bio-Phylo

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p5-Bio-SCF

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p5-bioperl

Make it so that the default Perl is always called perl5.

2015-09-14 12:19:48 +00:00

p5-bioperl-run

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paml

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phrap

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phred

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phylip

Unbreak

2015-07-28 17:52:11 +00:00

phyml

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platon

- Mark BROKEN: checksum mismatch:

2015-11-29 03:13:34 +00:00

plink

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

plinkseq

- Update maintainer mail address

2015-12-11 08:48:56 +00:00

primer3

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protomol

Convert ports to use the options helpers in categories [abc]*, and minor fixes.

2015-08-19 13:29:59 +00:00

psi88

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py-biopython

Update to 1.65.

2015-08-05 10:32:31 +00:00

pycogent

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pyfasta

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python-nexus

- Update to 1.32

2015-12-11 00:59:39 +00:00

recombine

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ruby-bio

- Fix typo

2015-10-10 23:15:16 +00:00

samtools

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seaview

biology/seaview: Broken, Does not fetch (checksum mismatch)

2015-11-02 08:14:30 +00:00

seqan

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seqio

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seqtools

biology/seqtools: 4.39.2 -> 4.39.3

2015-12-05 13:20:21 +00:00

sim4

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ssaha

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t_coffee

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tinker

Convert ports to use the options helpers in categories [abc]*, and minor fixes.

2015-08-19 13:29:59 +00:00

treepuzzle

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treeviewx

- Pet portlint

2015-10-14 23:50:11 +00:00

tRNAscan-SE

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ugene

biology/ugene: qt4-linguist -> qt4-linguisttools

2015-08-18 20:02:45 +00:00

velvet

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wise

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xmolwt

Fix previous commit.

2015-08-19 13:41:51 +00:00

Makefile

Remove expired ports:

2015-11-28 23:08:03 +00:00