Fernando Apesteguía ce5ee34406 science/afni: update to 24.1.06		2024-04-28 18:27:47 +02:00
..
2d-rewriter
abinit	science/abinit: Fix tests by adding a workaround for a problem	2024-04-17 00:38:17 -07:00
afni	science/afni: update to 24.1.06	2024-04-28 18:27:47 +02:00
agrum	science/agrum: update 1.12.1 → 1.13.1	2024-04-21 12:42:25 -07:00
aircraft-datcom
ALPSCore
antioch
apbs
arbor
ascent
atompaw
avogadro2
avogadrolibs
axom
bagel
bddsolve
berkeleygw
bodr
bout++
bout++-merging-filaments
buddy
cantera
cardioid
cdf
cdk	*/*: properly depend on Maven package	2024-03-11 10:09:45 +01:00
cdo	graphics/proj: Update to 9.4.0	2024-04-15 06:44:23 +02:00
cgnslib
cgribex	science/cgribex: Update to 2.0.0	2024-04-10 15:19:33 +08:00
checkmol
chemical-mime-data
chemicalfun
chemps2
chemtool	science/chemtool: Move man pages to share/man	2024-03-21 12:34:32 +00:00
chemtool-devel	*/*: Remove GNU_CONFIGURE_MANPREFIX after move man pages to share/man	2024-04-14 10:41:16 +01:00
chimes-calculator
ChipmunkPhysics
chrono
cif-tools
clhep
clipper
code_saturne
colt
conduit	science/conduit: update 0.8.8 → 0.9.1	2024-04-05 02:15:39 -07:00
coordgenlibs
cp2k
cp2k-data
csvtk	all: Bump after lang/go121 update	2024-04-15 08:20:04 +00:00
dakota
dalton
dd_package
devisor
dftbplus
dftd3
dftd4	science/{,py-}dftd4: update 3.5.0 → 3.6.0	2024-04-21 15:18:41 -07:00
dimod
dirac	science/dirac: Broken on i386	2024-04-27 00:53:00 -07:00
dkh
dlib-cpp
drawxtl
dssp
dvc
dwave-preprocessing
dynare	*/*: pursue math/matio update	2024-04-22 17:22:24 +03:00
eccodes	science/eccodes: Update to 2.35.0	2024-04-13 17:31:34 +08:00
elk	science/elk: update 9.5.1 → 9.5.14	2024-04-14 12:07:34 -07:00
elmerfem	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib
gchemutils
gcp
gdma
geant4	devel/onetbb: Update to 2021.12.0	2024-04-17 13:28:34 +02:00
gemmi
getdp	science/getdp: Updat to 3.6.0.	2024-03-11 14:32:08 -05:00
ghemical
ghmm
gnudatalanguage	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
gpaw-setups
gramps	science/gramps: Update to 5.2.2	2024-04-07 08:47:46 +01:00
grib_api
gromacs	science/gromacs: update 2023.2 → 2024.1	2024-03-29 09:06:08 -07:00
gsmc	science/gsmc: Moved man to share/man	2024-02-25 13:54:38 +01:00
gtamsanalyzer
h5utils	science/h5utils: Drop USES=autoreconf	2024-04-14 13:03:19 +01:00
h5z-zfp
harminv	science/harminv: Moved man to share/man	2024-02-25 13:54:40 +01:00
hdf
hdf5	science/hdf5: Update WWW	2024-03-23 22:30:46 +08:00
hdf5-18
hdf5-110
healpix
helfem
hepmc3	science/hepmc3: update 3.2.6 → 3.2.7	2024-04-21 15:17:18 -07:00
highfive	science/highfive: update 2.8.0 → 2.9.0	2024-03-11 12:16:48 -07:00
hypre
iboview
InsightToolkit	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
InsightToolkit501	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
isaac-cfd
jdftx
jmol
jstrack
kalzium
kim-api
kplib	science/kplib: Fix build by removing -Werror promoting a warrning to an error	2024-04-11 01:17:15 -07:00
kst2	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
lammps	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
lamprop
latte
libaec	science/libaec: Do not build testing unconditionally	2024-04-06 08:00:10 +08:00
libccp4
libcifpp
libcint	science/libcint: update 6.1.0 → 6.1.2	2024-03-14 10:44:06 -07:00
libctl
libecpint
libefp
libgetar
libghemical
libgridxc
libint
libint2	science/libint2: update 2.8.2 → 2.9.0	2024-03-06 11:50:16 -08:00
libint2-psi4
libkml
liblinear
libmbd
libmsym
libnegf
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc	science/libxc: update 6.0.0 → 6.2.2	2024-04-04 01:05:02 -07:00
liggghts	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
linux-zotero
luscus
m-aneos
madness
maeparser
massxpert
mbdyn	science/mbdyn: Move man pages to share/man	2024-03-21 12:34:33 +00:00
mcpl
mcstas
mcstas-comps
mctc-lib
mcxtrace	science/mcxtrace: Moved man to share/man	2024-02-25 13:54:42 +01:00
mcxtrace-comps
mdynamix
medit
meep
mercantile
metaphysicl
minc2	science/minc2: Moved man to share/man	2024-02-25 13:54:43 +01:00
mmdb2
mmtf-cpp
mol2ps
molgif	all: Bump after lang/go121 update	2024-04-15 08:20:04 +00:00
molscript
molsketch
mopac
mp2d
mpb	science/mpb: Move man pages to share/man	2024-03-21 12:34:33 +00:00
mpqc	science/mpqc: Move manpages to share/man	2024-03-25 21:41:04 +03:00
mrchem
mrcpp
msms
mstore
multicharge
multiwfn	science/multiwfn: Fix build on quarterly by adding MAKE_JOBS_UNSAFE	2024-04-28 01:50:50 -07:00
mutationpp
namd
ncrystal
nest	science/nest: update 3.5 → 3.7	2024-04-15 21:15:49 -07:00
netcdf	*/*: Remove GNU_CONFIGURE_MANPREFIX=${PREFIX}/share after 9fd7ee1cdf	2024-04-13 21:03:19 +08:00
netcdf-cxx	science/netcdf-cxx: Remove unnecessary substitution	2024-03-23 22:30:46 +08:00
netcdf-fortran	science/netcdf-fortran: Update to 4.6.1	2024-04-18 20:48:10 +08:00
nifticlib
nlcglib	devel/kokkos: update 4.1.00 → 4.3.00	2024-04-21 11:28:27 -07:00
nwchem	*/*: clean up after swith to cmake:indirect	2024-04-11 12:27:00 +03:00
nwchem-data	science/nwchem-data: update 7.2.0 → 7.2.2	2024-04-12 17:17:24 -07:00
ocean	science/ocean: Fix build by adding MAKE_JOBS_UNSAFE	2024-04-07 12:17:13 -07:00
octopus	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
openbabel
openems
openkim-models
openmc	science/openmc: update 0.13.3 → 0.14.0	2024-04-06 01:34:42 -07:00
openmodelica	science/openmodelica: update 1.22.2 → 1.22.3	2024-04-06 07:54:51 -07:00
openmolcas
openmx
opensim-core
opensph	devel/onetbb: Update to 2021.12.0	2024-04-17 13:28:34 +02:00
opsin	*/*: properly depend on Maven package	2024-03-11 10:09:45 +01:00
optench
orthanc	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
orthanc-dicomweb
orthanc-mysql
orthanc-postgresql
orthanc-webviewer
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2	devel/onetbb: Update to 2021.12.0	2024-04-17 13:28:34 +02:00
paje
paraview	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
pastix
pcmsolver
PETSc	science/PETSc: update 3.21.0 → 3.21.1	2024-04-27 00:53:00 -07:00
phonopy	science/{,py-}phonopy: update 2.22.0 → 2.22.1	2024-03-29 13:06:56 -07:00
plumed
pnetcdf	*/*: Remove GNU_CONFIGURE_MANPREFIX=${PREFIX}/share after 9fd7ee1cdf	2024-04-13 21:03:19 +08:00
polytope
precice
psi4	science/psi4: update 1.9 → 1.9.1	2024-04-04 01:05:04 -07:00
pulseview
py-abipy
py-access
py-arbor
py-arch	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-asap3
py-asdf	science/py-asdf: Convert to USE_PYTHON=pytest	2024-04-09 04:17:28 +08:00
py-asdf-standard	science/py-asdf-standard: Update to 1.1.1	2024-03-23 22:49:29 +08:00
py-asdf-transform-schemas	science/py-asdf-transform-schemas: Update to 0.5.0	2024-03-23 22:49:30 +08:00
py-ase
py-atomium
py-avogadrolibs
py-boutdata	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-boututils	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-cdo
py-cfgrib	science/py-cfgrib: Update to 0.9.11.0	2024-04-08 14:46:53 +08:00
py-chainer
py-chainer-chemistry
py-chempy	science/py-chempy: update 0.8.3 → 0.9.0	2024-04-25 07:52:09 -07:00
py-cirq-aqt
py-cirq-core
py-cirq-google
py-cirq-ionq
py-cirq-pasqal
py-cirq-rigetti
py-coards
py-DendroPy
py-dftbplus
py-dftd4	science/{,py-}dftd4: update 3.5.0 → 3.6.0	2024-04-21 15:18:41 -07:00
py-dimod
py-dipy	science/py-dipy: update 1.8.0 → 1.9.0	2024-04-22 01:25:11 -07:00
py-dlib	*/*: convert to cmake:indirect	2024-04-11 12:16:53 +03:00
py-dwave-cloud-client	devel/py-python-dateutil: Move devel/py-dateutil to devel/py-python-dateutil	2024-04-13 22:47:51 +08:00
py-dwave-greedy
py-dwave-hybrid	science/py-dwave-hybrid: update 0.6.10 → 0.6.11	2024-03-04 15:19:09 -08:00
py-dwave-inspector
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk	science/py-dwave-ocean-sdk: update 6.8.0 → 6.9.0	2024-03-04 15:19:10 -08:00
py-dwave-preprocessing
py-dwave-samplers
py-dwave-system
py-dwave-tabu
py-dwavebinarycsp
py-earthpy
py-eccodes	science/py-eccodes: Update to 1.7.0	2024-03-09 22:06:14 +08:00
py-emmet-core	science/py-emmet-core: Add NO_ARCH	2024-03-10 03:10:04 +08:00
py-esda	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-fresnel	devel/onetbb: Update to 2021.12.0	2024-04-17 13:28:34 +02:00
py-gemmi
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py	science/py-h5py: Update to 3.11.0	2024-04-13 17:31:41 +08:00
py-h5pyd	science/py-h5pyd: New port: h5py compatible client lib for HDF REST API	2024-04-07 11:37:59 -07:00
py-HepMC3
py-hiphive
py-HofstadterTools	science/py-HofstadterTools: New port: Package for analyzing the Hofstadter model of particles in the lattice	2024-04-19 12:28:24 -07:00
py-hoomd-blue	devel/onetbb: Update to 2021.12.0	2024-04-17 13:28:34 +02:00
py-inequality	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-ipygany
py-jupyter_jsmol	science/py-jupyter_jsmol: Convert to USE_PYTHON=pytest	2024-03-09 23:21:42 +08:00
py-kim-query
py-kimpy
py-kinematics
py-kliff
py-kpLib	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-liac-arff
py-libgetar
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-meshio	science/py-meshio: Convert to USE_PYTHON=pytest	2024-03-09 23:21:44 +08:00
py-mmcif
py-mmtf-python
py-molmod
py-moltemplate
py-mp-api	science/py-mp-api: Add NO_ARCH	2024-03-10 03:10:05 +08:00
py-mpcontribs-client	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-mrchem
py-ncrystal
py-netCDF4
py-netcdf-flattener
py-nglview	science/py-nglview: update 3.0.7 → 3.1.2	2024-04-20 01:34:04 -07:00
py-nibabel	science/py-nibabel: update 5.2.0 → 5.2.1	2024-04-14 12:07:37 -07:00
py-nilearn
py-obspy
py-oddt
py-openbabel
py-OpenFermion	science/py-OpenFermion: update 1.6.0 → 1.6.1	2024-04-27 00:52:59 -07:00
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC	science/py-OpenMC: update 0.13.3 → 0.14.0	2024-04-06 01:34:42 -07:00
py-openpiv
py-optking
py-paida
py-paramz
py-penaltymodel
py-phono3py
py-phonopy	science/{,py-}phonopy: update 2.22.0 → 2.22.1	2024-03-29 13:06:56 -07:00
py-PubChemPy
py-pupynere
py-py3Dmol	science/py-py3Dmol: update 2.0.3 → 2.1.0	2024-03-12 23:17:02 -07:00
py-pyaixi
py-pyberny
py-pycsw
py-pydicom
py-PyFR
py-pygeodesy
py-pygeometa
py-pygmo2
py-pyked
py-pymatgen	science/py-pymatgen: Convert to USE_PYTHON=pytest	2024-03-09 23:21:48 +08:00
py-pymatgen-analysis-alloys
py-pymbd
py-pymol
py-PyNE
py-pyosf
py-pyprecice
py-pyqubo
py-pysal
py-pyscf
py-pyteomics	science/py-pyteomics: Convert to USE_PYTHON=pep517	2024-03-09 22:06:14 +08:00
py-qcelemental
py-qcengine
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize	science/py-scikit-optimize: Update to 0.10.1	2024-03-23 22:49:30 +08:00
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-sdf
py-segregation	science/py-segregation: Remove PY_SETUPTOOLS	2024-04-08 14:46:54 +08:00
py-segyio	science/{,py-}segyio: update 1.9.11 → 1.9.12	2024-04-08 00:31:00 -07:00
py-signac
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti	science/py-spaghetti: Remove PY_SETUPTOOLS	2024-04-08 14:46:56 +08:00
py-spglib	science/{,py-}spglib: update 2.3.1 → 2.4.0	2024-04-11 21:33:44 -07:00
py-tensorflow
py-thewalrus
py-tobler
py-trainstation
py-trx-python	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
py-tweedledum
py-vedo
py-veusz
py-xbout	devel/py-setuptools-scm: update to 8.0.4	2024-02-29 02:18:32 -05:00
pybrain
pynn
q
qbox	science/qbox: update 1_76_3 → 1_76_4	2024-03-22 05:22:54 -07:00
qcl
qiskit-aer
qmcpack
qt6-quick3dphysics	science/qt6-quick3dphysics: Fix plist	2024-04-02 22:38:11 +02:00
quantum-espresso	science/quantum-espresso: Remove wannier90 binaries, which fixes conflict for science/ocean	2024-04-11 20:01:49 -07:00
quantum-espresso-pseudopotentials	science/quantum-espresso-pseudopotentials: update g20180406 → g20220916	2024-03-16 01:05:36 -07:00
quantum-jet
qwalk
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi	science/R-cran-Epi: Update to 2.48	2024-04-03 22:07:10 +00:00
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit	science/rdkit: Clang-17 crashes on FreeBSD 15 amd64	2024-03-17 01:21:51 -07:00
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4	graphics/proj: Update to 9.4.0	2024-04-15 06:44:23 +02:00
rubygem-rgeo-shapefile
rubygem-ruby-netcdf
salome-configuration
salome-kernel
scidavis
sciplot
segyio	science/{,py-}segyio: update 1.9.11 → 1.9.12	2024-04-08 00:31:00 -07:00
serac
shelxle	science/shelxle: update 1.0.1636 → 1.0.1638	2024-04-25 23:15:15 -07:00
siconos
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simple-dftd3
simsmith
sirius
smoldyn	graphics/tiff: Update to 4.6.0	2024-04-27 14:44:59 +02:00
sparta
spglib	science/{,py-}spglib: update 2.3.1 → 2.4.0	2024-04-11 21:33:44 -07:00
spheral	science/spheral: update 2024.01.0 → 2024.01.1	2024-04-08 09:57:53 -07:00
step	*/*: Chase update of math/libqalculate	2024-03-28 17:16:58 -04:00
tblite
teem
tfel
tfel-edf
thermofun	science/thermofun: update 0.4.4 → 0.4.5	2024-04-27 00:52:59 -07:00
tinker	science/tinker: update 8.10.5 → 8.11.1	2024-04-14 12:07:35 -07:00
trilinos	science/trilinos: Fix build on 13 and maybe other systems	2024-04-04 14:43:35 -07:00
ttk	science/ttk: Attempt to fix build by adding the searched depency package fast_float	2024-04-08 12:18:41 -07:00
tweedledum
udunits
ukrmol+
v_sim
vipster
vmd
voro++	science/voro++: Move man pages to share/man	2024-03-21 17:10:16 +00:00
votca	science/votca: update 2023 → 2024	2024-03-29 09:06:09 -07:00
wannier90
wwplot	science/wwplot: update 0.0.9 → 1.0.0	2024-04-19 12:28:22 -07:00
wxmacmolplt	science/wxmacmolplt: Move man pages to share/man	2024-03-21 17:10:16 +00:00
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero	science/zotero: Update to 6.0.36	2024-03-18 10:21:38 +01:00
zx
Makefile	science/py-HofstadterTools: New port: Package for analyzing the Hofstadter model of particles in the lattice	2024-04-19 12:28:24 -07:00