Rong-En Fan 0e77ef5912 - Update to 35.3.5 ... - Switch to .tar.gz distfile so that we don't define our do-extract - While I'm here, using substitution for version numbers in pkg-plist for easier upgrade PR: ports/121690 Submitted by: Wen heping <wenheping at gmail.com> Approved by: maintainer timeout (2 weeks)		2008-03-30 05:07:36 +00:00
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adun
ariadne
artemis
avida
babel
belvu
biococoa
biojava
blast	Remove always-false/true conditions based on OSVERSION 500000	2007-10-04 00:15:01 +00:00
blat	Fix build on !i386	2008-01-04 15:14:52 +00:00
boinc-simap
chemeq	Migration from bison 1.x to 2.x	2007-10-17 10:13:01 +00:00
clustalw	- Update to 2.0.5	2008-03-19 14:01:13 +00:00
crimap
distribfold
dna-qc
dotter	Umark BROKEN, stale distfile removed from ftp-master.	2008-01-27 11:26:35 +00:00
embassy	- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG	2008-03-23 16:44:09 +00:00
emboss	- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG	2008-03-23 16:44:09 +00:00
fasta
fasta3	- Update to 35.3.5	2008-03-30 05:07:36 +00:00
fastdnaml
finchtv
fluctuate
garlic	- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG	2008-03-24 13:03:55 +00:00
genpak
gff2ps
gmap
gperiodic
grappa
hmmer
jalview
kinemage
L-Breeder	- Remove USE_X_PREFIX	2008-03-21 20:00:05 +00:00
lagan
lamarc	- Update to 2.1.2b	2007-10-23 23:07:19 +00:00
libgenome
linux-foldingathome	- Fix typo in WWW	2007-10-04 07:28:40 +00:00
lsysexp	- Remove USE_X_PREFIX	2008-03-21 20:00:05 +00:00
mafft
migrate	- File was rerolled for a small bugfix.	2008-02-27 07:34:21 +00:00
molden
mopac
mrbayes	MrBayes is a program for the Bayesian estimation of phylogeny.	2007-12-15 15:13:41 +00:00
mummer	MUMmer is a modular system for the rapid whole genome alignment of finished	2007-12-14 20:54:47 +00:00
nab	- Allow build with AMD64	2007-10-28 21:42:23 +00:00
ncbi-toolkit
ortep3
p5-AcePerl	Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.	2007-09-08 01:12:10 +00:00
p5-Bio-ASN1-EntrezGene	Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.	2007-09-08 01:12:10 +00:00
p5-Bio-Das	- Update to 1.07	2008-03-12 12:24:10 +00:00
p5-Bio-Phylo	Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.	2007-09-08 01:12:10 +00:00
p5-bioperl	Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.	2007-09-08 01:12:10 +00:00
p5-bioperl-devel	Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.	2007-09-08 01:12:10 +00:00
p5-bioperl-run	Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.	2007-09-08 01:12:10 +00:00
p5-bioperl-run-devel	Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.	2007-09-08 01:12:10 +00:00
paml
phylip
platon
povchem
primer3
protomol	- Fix build with GCC 4.2	2008-03-28 19:01:48 +00:00
psi88
py-biopython
pymol	- Add missing dependens	2008-03-27 11:20:17 +00:00
rasmol
recombine
ruby-bio	- Update to 1.1.0	2007-10-24 01:38:51 +00:00
seaview	- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG	2008-03-23 16:44:09 +00:00
seqio
sim4
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE
wise
xdrawchem	- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG	2008-03-23 23:03:18 +00:00
xmolwt
Makefile	MrBayes is a program for the Bayesian estimation of phylogeny.	2007-12-15 15:13:41 +00:00