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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-23 00:43:28 +00:00
freebsd-ports/biology
Doug Barton 989772c9ac The vast majority of pkg-descr files had the following format when they
had both lines:

Author: ...
WWW: ....

So standardize on that, and move them to the end of the file when necessary.

Also fix some more whitespace, and remove more "signature tags" of varying
forms, like -- name, etc.

s/AUTHOR/Author/

A few other various formatting issues
2011-10-24 09:11:38 +00:00
..
adun
ariadne
artemis Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon, 2011-07-21 05:03:02 +00:00
avida Change maintainer address to my FreeBSD address 2011-09-15 12:33:27 +00:00
babel
belvu
biococoa
biojava
blast
blat
boinc-simap
chemeq Remove WWW entries from unmaintained ports that return 404 or where the domain 2011-08-02 20:58:23 +00:00
clustalw Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since 2011-08-11 19:20:17 +00:00
consed
crux - Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS) 2011-09-23 22:26:39 +00:00
dna-qc
dotter
embassy - Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS) 2011-09-23 22:26:39 +00:00
emboss - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
fasta
fasta3 - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
fastdnaml - Fix MASTER_SITES and WWW: line 2011-08-26 00:24:48 +00:00
finchtv
fluctuate
garlic
genpak
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon, 2011-07-21 05:03:02 +00:00
lagan
lamarc Change maintainer address to my FreeBSD address 2011-09-15 12:33:27 +00:00
libgenome
libsbml
linux-foldingathome
mafft
mapm3
migrate
molden The vast majority of pkg-descr files had the following format when they 2011-10-24 09:11:38 +00:00
mopac - Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS) 2011-09-23 22:26:39 +00:00
mrbayes
mummer
muscle
ncbi-toolkit - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
njplot
ortep3
p5-AcePerl - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
p5-Bio-ASN1-EntrezGene - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
p5-Bio-Das - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
p5-Bio-Das-Lite - Fix missing DEPENDS to silence build warnings 2011-09-24 20:45:23 +00:00
p5-Bio-GFF3 - Update to 0.7 2011-10-10 02:33:51 +00:00
p5-Bio-Glite
p5-Bio-Graphics - Fix LICENSE (Artistic 1 instead of Artistic 2) 2011-10-07 11:22:46 +00:00
p5-Bio-MAGETAB - Add build depends to silence build warnings 2011-09-25 00:07:08 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo - Update to 0.43 2011-10-17 01:38:22 +00:00
p5-Bio-SCF
p5-bioperl - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
p5-bioperl-run
paml
phd2fasta
phrap
phred
phylip
phyml
platon The vast majority of pkg-descr files had the following format when they 2011-10-24 09:11:38 +00:00
povchem
primer3 - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
protomol - Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS) 2011-09-23 22:26:39 +00:00
psi88
py-biopython - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
pycogent - Update to 1.5.1 2011-08-11 11:37:18 +00:00
pyfasta - Update to 0.44 2011-10-13 06:27:34 +00:00
pymol
python-nexus
rasmol
recombine
ruby-bio
seaview
seqio
sim4
ssaha
t_coffee - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
tinker - ${FFLAGS} might contain commas 2011-10-10 20:17:22 +00:00
treepuzzle
treeviewx - remove maintainer tags from pkg-descr 2011-10-22 23:50:23 +00:00
tRNAscan-SE
velvet
wise
xdrawchem - Add LDFLAGS to CONFIGURE_ENV and MAKE_ENV (as it was done with LDFLAGS) 2011-09-23 22:26:39 +00:00
xmolwt The vast majority of pkg-descr files had the following format when they 2011-10-24 09:11:38 +00:00
Makefile Bye bye abandonwares (part 2) 2011-08-01 04:29:44 +00:00