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46 lines
834 B
Makefile
46 lines
834 B
Makefile
# $FreeBSD$
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PORTNAME= Jellyfish
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DISTVERSIONPREFIX= v
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DISTVERSION= 2.2.10
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PORTREVISION= 8
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CATEGORIES= biology
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Fast, memory-efficient counting of k-mers in DNA
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LICENSE= GPLv3+
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LICENSE_FILE= ${WRKSRC}/LICENSE
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BUILD_DEPENDS= yaggo:devel/yaggo
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LIB_DEPENDS= libhts.so:biology/htslib
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USES= autoreconf compiler:c++11-lib gmake libtool pathfix pkgconfig
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USE_LDCONFIG= yes
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USE_GITHUB= yes
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GNU_CONFIGURE= yes
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GH_ACCOUNT= gmarcais
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INSTALL_TARGET= install-strip
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PLIST_SUB= VER=${PORTVERSION}
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OPTIONS_DEFINE= NLS
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OPTIONS_SUB= yes
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NLS_USES= gettext
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NLS_CONFIGURE_ENABLE= nls
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.include <bsd.port.pre.mk>
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# SSE code assumes amd64 features
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.if ${ARCH} != "amd64"
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CONFIGURE_ARGS+=--without-sse
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.endif
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.if ${CHOSEN_COMPILER_TYPE} == gcc
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CXXFLAGS+= -faligned-new
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.endif
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.include <bsd.port.post.mk>
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