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mirror of https://git.FreeBSD.org/ports.git synced 2024-10-21 20:38:45 +00:00
freebsd-ports/biology
Baptiste Daroussin 2afa67184c Update to 0.5.1 snapshot 20100824
For the story when moved to google code the project released a version 0.5 which was newer than the 0.5.1 from earlier hosting
To be consistent named it 0.5.1s20100824 (following what debian did)
Switch treeviewx to use unicode version of wx
Add a patch from Ubuntu to fix loading trees.
2014-06-03 14:51:29 +00:00
..
ariadne
artemis
avida
babel
biococoa
biojava - add stage support 2014-06-01 10:37:22 +00:00
blast Multiple ports: reset maintainers 2014-05-26 02:33:38 +00:00
blat
boinc-simap
chemeq
clustalw Multiple ports: reset maintainers 2014-05-26 02:33:38 +00:00
consed
crux
embassy biology/embassy: specify post-extraction with ${TAR} 2014-05-29 10:47:58 +00:00
emboss
fasta
fasta3
fastdnaml
fluctuate
garlic
gff2ps
gmap
gperiodic
grappa
hmmer
iolib - I forgot to svn add a new patch 2014-05-31 18:03:08 +00:00
jalview
lagan
lamarc
libsbml
linux-foldingathome
mafft Add DOCS and EXAMPLE options to biology/mafft 2014-05-31 04:18:18 +00:00
mapm3
migrate
molden
mopac
mrbayes
mummer - add stage support 2014-06-01 10:54:33 +00:00
muscle - add stage support 2014-06-01 11:05:43 +00:00
ncbi-toolkit
njplot - add stage support 2014-06-01 11:26:39 +00:00
ortep3
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB - update to 1.31 2014-05-16 13:33:02 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl - Update to 1.6.923 2014-05-30 15:46:05 +00:00
p5-bioperl-run
paml
phd2fasta
phrap
phred
phylip
phyml
platon
plink
plinkseq
povchem
primer3 Quote ${CC} and similar variables in MAKE_ARGS. 2014-05-20 19:32:39 +00:00
protomol
psi88
py-biopython
pycogent
pyfasta
pymol
python-nexus
recombine
ruby-bio
seaview - Update to 4.5.1 2014-05-21 05:40:53 +00:00
seqan - add stage support 2014-06-01 11:42:17 +00:00
seqio
seqtools
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx Update to 0.5.1 snapshot 20100824 2014-06-03 14:51:29 +00:00
tRNAscan-SE
ugene
velvet - add stage support 2014-06-01 11:33:57 +00:00
wise
xmolwt
Makefile