Baptiste Daroussin 895c00dee5 USES=execinfo		2014-08-04 23:06:21 +00:00
..
ariadne	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
artemis
avida
babel	Rename biology/ patch-xy patches to reflect the files they modify.	2014-07-28 14:22:16 +00:00
biococoa
biojava	- add stage support	2014-06-01 10:37:22 +00:00
blast	Mark as broken: no distinfo provided	2014-06-22 22:06:01 +00:00
blat	Put HOME in MAKE_ARGS to handle pverride of HOME in MAKE_ENV from bsd.port.mk	2014-06-25 08:55:55 +00:00
boinc-simap
chemeq
clustalw	Multiple ports: reset maintainers	2014-05-26 02:33:38 +00:00
consed	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
crux	Convert a bunch of USE_BZIP2 to USES=tar:bzip2	2014-07-29 18:41:15 +00:00
embassy	Reset maintainership for ports not staged with no pending PR	2014-07-23 16:44:27 +00:00
emboss	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
fasta
fasta3
fastdnaml
fluctuate
garlic	biology/garlic: Stage properly to unbreak	2014-07-17 10:13:06 +00:00
gff2ps
gmap
gperiodic
grappa
hmmer	Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS.	2014-07-15 14:54:54 +00:00
iolib	- I forgot to svn add a new patch	2014-05-31 18:03:08 +00:00
jalview
lagan
lamarc
libsbml	- Update to 5.10.0	2014-05-13 07:04:17 +00:00
linux-foldingathome	Stagify.	2014-07-06 16:05:34 +00:00
mafft	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
mapm3
migrate
molden	Catch a couple of missing convertsion to :tu/:tl	2014-05-05 11:15:53 +00:00
mopac
mrbayes
mummer	biology/mummer: Use OPSYS with OSVERSION	2014-07-19 22:00:16 +00:00
muscle	Update to 3.8.31.	2014-06-17 21:36:06 +00:00
ncbi-toolkit
njplot	- add stage support	2014-06-01 11:26:39 +00:00
ortep3
p5-AcePerl	Rename biology/ patch-xy patches to reflect the files they modify.	2014-07-28 14:22:16 +00:00
p5-Bio-ASN1-EntrezGene	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics	Really fix.	2014-07-25 23:08:58 +00:00
p5-Bio-MAGETAB	- update to 1.31	2014-05-16 13:33:02 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF	Remove all the bootstrap files (.bs) from the plists.	2014-06-10 12:14:12 +00:00
p5-bioperl	biology/p5-bioperl: fix pkg-descr sidenote link	2014-08-04 04:32:38 +00:00
p5-bioperl-run	biology/p5-bioperl-run: 1.6.1 -> 1.6.901, unbreak, stagify	2014-08-04 08:54:10 +00:00
paml	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
phd2fasta	Reset maintainership for ports not staged with no pending PR	2014-07-23 16:44:27 +00:00
phrap	Replace maintainer's email address with one that seems to work	2014-05-10 18:07:52 +00:00
phred	Replace maintainer's email address with one that seems to work	2014-05-10 18:07:52 +00:00
phylip	The FreeBSD x11@ and graphics team proudly presents	2014-04-16 18:28:47 +00:00
phyml
platon	Add a DOCS option.	2014-08-03 21:44:23 +00:00
plink
plinkseq	- Switch to USES=libtool, drop .la files	2014-07-22 22:12:15 +00:00
povchem	Rename biology/ patch-xy patches to reflect the files they modify.	2014-07-28 14:22:16 +00:00
primer3	Quote ${CC} and similar variables in MAKE_ARGS.	2014-05-20 19:32:39 +00:00
protomol	Reset maintainership for ports not staged with no pending PR	2014-07-23 16:44:27 +00:00
psi88	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
py-biopython	- Stage	2014-04-27 01:59:47 +00:00
pycogent	- Stage support [1]	2014-05-02 14:00:13 +00:00
pyfasta	- Update to 0.5.2	2014-04-06 04:05:43 +00:00
pymol	Convert a bunch of USE_BZIP2 to USES=tar:bzip2	2014-07-29 18:41:15 +00:00
python-nexus	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
recombine
ruby-bio	Support stage	2014-04-07 13:01:26 +00:00
seaview	- Update to 4.5.2	2014-06-04 06:28:56 +00:00
seqan	Use gcc on all platforms.	2014-07-10 22:29:52 +00:00
seqio
seqtools	USES=execinfo	2014-08-04 23:06:21 +00:00
sim4
ssaha
t_coffee	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
tinker	- Un-break fetch stage: the name scheme of the source tarballs has changed	2014-04-22 19:28:18 +00:00
treepuzzle
treeviewx	Unbreak	2014-06-04 20:08:15 +00:00
tRNAscan-SE	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
ugene	USES=execinfo	2014-08-04 23:06:21 +00:00
velvet	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
wise
xmolwt
Makefile	Remove expired ports:	2014-04-18 11:17:45 +00:00