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2d-rewriter
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abinit
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science/abinit: Add OPENMP and MPI options
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2019-02-27 05:37:33 +00:00 |
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afni
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agrum
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Remove bogus dependency, agrum links against libomp from llvm port
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2019-02-16 13:18:10 +00:00 |
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aircraft-datcom
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ALPSCore
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science/ALPSCore: Mark broken on i386
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2019-02-02 17:53:04 +00:00 |
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antioch
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Update math/eigen3 to 3.3.7
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2018-12-26 09:06:34 +00:00 |
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atom
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atompaw
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avogadro
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avogadro2
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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avogadrolibs
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Move: science/mmtf -> science/mmtf-cpp
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2019-02-16 08:02:02 +00:00 |
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bagel
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science/bagel: Update 1.2.1 -> 1.2.2
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2019-01-15 18:27:47 +00:00 |
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bddsolve
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berkeleygw
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bodr
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brian
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buddy
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cdcl
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cdf
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cdo
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Update to 1.9.6
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2019-02-09 23:27:28 +00:00 |
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cgnslib
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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cgribex
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Update to 1.9.0
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2019-02-05 13:48:25 +00:00 |
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checkmol
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- Add LLD_UNSAFE
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2019-01-15 05:43:59 +00:00 |
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chemical-mime-data
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Backout r493559
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2019-02-22 08:12:39 +00:00 |
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chemps2
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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chemtool
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chemtool-devel
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chrono
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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clhep
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science/clhep: Update version 2.4.0.4=>2.4.1.0
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2019-01-01 21:53:48 +00:00 |
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clipper
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code_saturne
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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colt
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coordgenlibs
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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coot
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science/coot: Remove the unused CONFIGURE_ARGS line
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2019-01-17 05:59:38 +00:00 |
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cp2k
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science/cp2k: Remove contiguous blank lines
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2019-01-26 05:23:51 +00:00 |
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crf++
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dalton
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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datawarrior
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science/datawarrior: Update 4.7.2 -> 5.0.0
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2019-01-26 08:01:20 +00:00 |
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dcl
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devisor
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dft_tools
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Deprecate ports broken for more than 6 months
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2019-02-03 20:46:35 +00:00 |
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dftbplus
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- science/dftbplus is not compatible with python3
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2019-01-05 15:14:26 +00:00 |
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dkh
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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dlib-cpp
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science/dlib-cpp and science/py-dlib: Update to 19.16.
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2019-02-23 16:19:52 +00:00 |
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dlpoly-classic
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drawxtl
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science/drawxtl: Unbreak on non-64-bit architectures
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2018-12-22 07:59:38 +00:00 |
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dvc
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science/dvc: Update 0.28.2 -> 0.29.0
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2019-02-22 05:18:38 +00:00 |
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eccodes
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Update to 2.12.0
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2019-02-19 19:46:50 +00:00 |
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elk
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epte
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erd
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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erkale
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Remove bogus dependency, erkale links against libomp from llvm
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2019-02-16 13:19:29 +00:00 |
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erkale-pseudopotentials
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New port: science/erkale-pseudopotentials: Pseudopotentials for Erkale, the quantum chemistry program
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2019-01-17 09:42:53 +00:00 |
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esys-particle
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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fastcap
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fasthenry
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fisicalab
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Move Objective-C ports to the v2 GNUstep ABI.
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2019-02-03 15:37:58 +00:00 |
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fleur
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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fsom
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fvcom
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fvcom-mpi
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gabedit
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science/gabedit: Update 2.5.0 -> 2.5.1
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2019-02-10 18:42:25 +00:00 |
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gamess-us
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gchemutils
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This port needs USES=compiler:c++11-lang to build on GCC-based
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2018-12-22 03:44:01 +00:00 |
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gdma
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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getdp
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ghemical
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science/ghemical: fix build with GCC-based architectures
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2018-12-23 18:08:26 +00:00 |
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ghmm
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gnudatalanguage
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wxGTK3.0: switch to gtk3 and webkit2
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2019-02-25 12:47:20 +00:00 |
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gpaw-setups
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gramps
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science/gramps: Update to 5.0.1
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2019-02-04 14:14:38 +00:00 |
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grib_api
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Update to 1.28.0
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2019-01-01 20:32:31 +00:00 |
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gromacs
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science/gromacs: Update 2019 -> 2019.1
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2019-02-17 02:32:07 +00:00 |
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gsmc
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gtamsanalyzer
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Move Objective-C ports to the v2 GNUstep ABI.
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2019-02-03 15:37:58 +00:00 |
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gwyddion
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h5utils
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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h5z-zfp
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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harminv
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hdf
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hdf5
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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hdf5-18
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healpix
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science/healpix: fix build with GCC-based architectures
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2019-02-10 17:09:19 +00:00 |
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hypre
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iboview
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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InsightToolkit
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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isaac-cfd
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jdftx
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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jmol
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science/jmol: Add the executable jmoldata for headless operation
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2019-02-13 10:21:20 +00:00 |
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jstrack
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kalzium
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Update KDE Applications to 18.12.2
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2019-02-08 05:11:13 +00:00 |
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kst2
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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lammps
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Update math/eigen3 to 3.3.7
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2018-12-26 09:06:34 +00:00 |
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lamprop
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- Update to 3.8
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2018-12-19 11:42:06 +00:00 |
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latte
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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libaec
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Update to 1.0.4
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2019-02-12 21:03:10 +00:00 |
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libccp4
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libcint
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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libctl
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libefp
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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libgeodecomp
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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libghemical
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science/libghemical: fix build with GCC-based architectures
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2018-12-17 17:51:21 +00:00 |
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libgridxc
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science/libgridxc: Update 0.8.4 -> 0.8.5
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2019-02-17 02:24:01 +00:00 |
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libint
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libint2
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libkml
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liblinear
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libmsym
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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liboglappth
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libquantum
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libssm
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libsvm
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libsvm-python
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libxc
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liggghts
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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lm
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science/lm: Do not set VMD_VARS twice
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2019-01-17 06:24:51 +00:00 |
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luscus
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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madness
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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maeparser
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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massxpert
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mbdyn
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mcstas
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Cleanup RLN usage
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2019-01-14 14:05:39 +00:00 |
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mcstas-comps
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science/mcstas-comps: Update to 2.5 and unbreak
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2019-02-20 22:34:23 +00:00 |
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mcxtrace
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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mcxtrace-comps
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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mdynamix
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medit
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meep
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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metaf2xml
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metaphysicl
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minc2
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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mmdb2
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science/mmdb2: Update 2.0.16 -> 2.0.19
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2018-12-15 20:45:04 +00:00 |
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mmtf-cpp
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Move: science/mmtf -> science/mmtf-cpp
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2019-02-16 08:02:02 +00:00 |
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mol2ps
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- Add LLD_UNSAFE
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2019-01-15 05:44:58 +00:00 |
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molgif
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molscript
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New port: science/molscript: Display 3D molecules in schematic and detailed representations
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2019-02-13 07:00:58 +00:00 |
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molsketch
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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MOOSE-neural-simulator
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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mpb
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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mpqc
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science/mpqc: Change net/mpich2 -> net/mpich
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2018-12-17 18:13:17 +00:00 |
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msms
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multiwfn
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namd
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netcdf
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Update to 4.6.2
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2019-01-13 20:08:05 +00:00 |
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netcdf-cxx
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Change MASTER_SITES
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2019-01-13 20:08:10 +00:00 |
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netcdf-fortran
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Update to 4.4.5
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2019-01-13 20:08:15 +00:00 |
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nifticlib
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nwchem
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science/nwchem: Update 6.8.1.20190125 -> 6.8.1.20190222
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2019-02-26 08:34:30 +00:00 |
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nwchem-data
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New port: science/nwchem-data: Data for NWChem, the computational chemistry software
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2019-01-26 22:00:10 +00:00 |
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octopus
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science/octopus: patches
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2019-01-20 01:22:46 +00:00 |
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openbabel
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Update math/eigen3 to 3.3.7
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2018-12-26 09:06:34 +00:00 |
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openkim
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openmx
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opensim-core
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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openstructure
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science/openstructure: python:2.7 for now
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2019-02-16 19:05:32 +00:00 |
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opsin
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New port: science/opsin: Open Parser for Systematic IUPAC Nomenclature of chemical names
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2019-02-14 00:54:56 +00:00 |
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p5-Algorithm-SVMLight
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p5-Chemistry-3DBuilder
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p5-Chemistry-Bond-Find
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p5-Chemistry-Canonicalize
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p5-Chemistry-Elements
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p5-Chemistry-File-MDLMol
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p5-Chemistry-File-Mopac
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p5-Chemistry-File-PDB
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p5-Chemistry-File-SLN
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p5-Chemistry-File-SMARTS
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p5-Chemistry-File-SMILES
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p5-Chemistry-File-VRML
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p5-Chemistry-File-XYZ
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p5-Chemistry-FormulaPattern
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p5-Chemistry-InternalCoords
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p5-Chemistry-Isotope
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p5-Chemistry-MacroMol
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p5-Chemistry-MidasPattern
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p5-Chemistry-Mok
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p5-Chemistry-Mol
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p5-Chemistry-Pattern
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p5-Chemistry-Reaction
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p5-Chemistry-Ring
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p5-Geo-BUFR
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Update to 1.37
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2019-02-17 19:39:21 +00:00 |
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p5-Geo-Coordinates-Converter
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p5-Geo-Coordinates-Converter-iArea
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p5-Geo-ReadGRIB
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p5-Geo-WebService-Elevation-USGS
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p5-Mcstas-Tools
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p5-PerlMol
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science/p5-PerlMol: Do not set BUILD_DEPENDS twice
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2019-01-08 16:00:58 +00:00 |
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p5-Physics-Unit
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paje
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Move Objective-C ports to the v2 GNUstep ABI.
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2019-02-03 15:37:58 +00:00 |
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paraview
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science/paraview: update to 5.6.0
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2019-02-07 16:58:51 +00:00 |
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pcmsolver
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science/pcmsolver: Update 1.2.2 -> 1.2.3
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2019-02-17 02:36:15 +00:00 |
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PETSc
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pnetcdf
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psychopy
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pulseview
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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py-abipy
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py-abipy is not compatible with python2
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2019-02-04 21:07:51 +00:00 |
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py-asdf
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Update to 2.3.2
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2019-02-20 20:47:15 +00:00 |
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py-ase
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py-avogadrolibs
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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py-cdo
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py-chempy
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py-coards
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py-DendroPy
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py-dlib
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science/dlib-cpp and science/py-dlib: Update to 19.16.
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2019-02-23 16:19:52 +00:00 |
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py-gpaw
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science/py-gpaw: Update 1.5.0 -> 1.5.1
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2019-01-26 05:31:44 +00:00 |
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py-GPy
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New port: science/py-GPy: Gaussian process toolbox
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2018-12-18 06:24:14 +00:00 |
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py-GPyOpt
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New port: science/py-GPyOpt: Bayesian optimization toolbox based on GPy
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2018-12-18 06:36:16 +00:00 |
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py-gsd
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science/py-gsd: Update 1.5.5 -> 1.6.0
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2018-12-21 05:02:15 +00:00 |
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py-h5py
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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py-hcluster
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py-kinematics
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py-lifelines
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science/py-lifelines: update to 0.17.0
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2019-01-13 18:19:07 +00:00 |
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py-MDAnalysis
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py-MDAnalysisTests
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py-mdp
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py-mlpy
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py-mmtf-python
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py-molmod
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py-netCDF4
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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py-obspy
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py-oddt
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New port: science/py-oddt: Open Drug Discovery Toolkit
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2019-02-09 22:51:25 +00:00 |
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py-OpenFermion
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science/py-OpenFermion: Update 0.8 -> 0.9.0
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2019-01-17 06:31:46 +00:00 |
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py-openpiv
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science/py-openpiv: Update to 0.21.0
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2019-01-07 10:36:38 +00:00 |
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py-paida
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py-paramz
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New port: science/py-paramz: Parameterization framework
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2018-12-18 06:20:06 +00:00 |
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py-phono3py
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py-phonopy
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py-pupynere
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py-pyaixi
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py-pydicom
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- Update to 1.2.2
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2019-02-13 23:49:54 +00:00 |
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py-PyFR
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py-pygeodesy
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py-pymatgen
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science/py-pymatgen: python-3 only
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2019-02-04 19:53:14 +00:00 |
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py-pymol
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Unbreak INDEX
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2019-02-16 10:32:12 +00:00 |
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py-pyosf
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py-PyQuante
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py-pysal
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py-pyteomics
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py-pyteomics.biolccc
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py-qspin
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py-quantities
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science/py-quantities: Update 0.12.2 -> 0.12.3
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2019-02-23 16:06:52 +00:00 |
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py-rmf
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This port requires USES=compiler:c++11-lang to build on GCC-based
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2019-01-12 23:32:09 +00:00 |
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py-rmsd
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science/py-rmsd: Fix CATEGORIES
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2019-01-18 02:07:03 +00:00 |
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py-ScientificPython
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py-scikit-fuzzy
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py-scikit-learn
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science/py-scikit-learn: update to 0.20.2
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2018-12-20 13:12:31 +00:00 |
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py-scikit-sparse
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py-scimath
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py-scipy
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- Update to 1.2.0
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2019-01-01 08:56:25 +00:00 |
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py-scoria
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py-SimpleSpectral
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py-spglib
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science/py-spglib: Update 1.11.1 -> 1.12.0
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2019-01-31 04:47:08 +00:00 |
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py-veusz
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py-ws2300
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pybrain
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pycdf
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pynn
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- Update to 0.9.3
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2019-01-14 03:26:29 +00:00 |
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qbox
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qcl
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qmcpack
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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qtresistors
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quantum-espresso
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quantum-espresso-pseudopotentials
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qwalk
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science/qwalk: Fix build with GCC-based architectures
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2018-12-18 08:43:53 +00:00 |
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R-cran-AMORE
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R-cran-bayesm
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- Update to 3.1.1
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2018-12-29 06:20:29 +00:00 |
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R-cran-cmprsk
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R-cran-DCluster
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R-cran-e1071
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R-cran-eco
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R-cran-Epi
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R-cran-epicalc
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R-cran-etm
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R-cran-fastICA
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R-cran-kernlab
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R-cran-snow
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R-cran-som
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R-cran-udunits2
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rdkit
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science/rdkit: Update 2018_09_1 -> 2018_09_2
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2019-02-23 07:33:55 +00:00 |
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rmf
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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rubygem-ai4r
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rubygem-cdo
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Update to 1.5.0
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2019-02-16 22:54:45 +00:00 |
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rubygem-rgeo
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rubygem-rgeo-geojson
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rubygem-rgeo-proj4
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rubygem-rgeo-shapefile
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Update to 2.0.0
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2019-02-24 17:56:50 +00:00 |
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rubygem-ruby-dcl
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Conditionalize the dependence of libunwind to x86-only to allow building
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2019-01-24 05:09:48 +00:00 |
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rubygem-ruby-netcdf
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scidavis
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
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2019-01-16 11:13:44 +00:00 |
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siesta
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sigrok-cli
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sigrok-firmware
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sigrok-firmware-fx2lafw
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sigrok-firmware-utils
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silo
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Update science/hdf5 to 1.10.4
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2019-01-05 22:46:53 +00:00 |
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simbody
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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simint
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Change cmake default behaviour to outsource.
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2018-12-25 20:25:39 +00:00 |
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simlib
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simsmith
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sparta
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spglib
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science/spglib: 1.11.2.1 -> 1.12.2
|
2019-02-10 01:33:34 +00:00 |
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step
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Update KDE Applications to 18.12.2
|
2019-02-08 05:11:13 +00:00 |
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svmlight
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szip
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Update to 2.1.1
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2019-02-24 17:56:03 +00:00 |
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teem
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Change cmake default behaviour to outsource.
|
2018-12-25 20:25:39 +00:00 |
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tfel
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tinker
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science/tinker: Update 8.4.4 -> 8.5.3
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2019-01-16 04:36:12 +00:00 |
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triqs
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Deprecate ports broken for more than 6 months
|
2019-02-03 20:46:35 +00:00 |
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udunits
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v_sim
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vipster
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science/vipster: Update 1.14.1a -> 1.15b
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2019-02-24 19:42:02 +00:00 |
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vmd
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voro++
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wannier90
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wxmacmolplt
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Unmark as broken now that wxgtk31 is hooked into the framework
|
2019-02-25 12:53:00 +00:00 |
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xcrysden
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xdrawchem
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Fix Qt5 symbol version scripts to put the catch-all clause first. When
|
2019-01-16 11:13:44 +00:00 |
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xfce4-equake-plugin
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Clenup xfce ports:
|
2019-01-22 14:44:38 +00:00 |
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xmakemol
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yoda
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science/yoda: Update 1.7.3 -> 1.7.4
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2018-12-15 21:26:37 +00:00 |
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Makefile
|
New port: science/dvc: Git for data scientists: manage code and data together
|
2019-02-18 19:37:36 +00:00 |
