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freebsd-ports/biology/paml/files/patch-aa
Steve Price 54c8d2b706 Add paml version 3.01.
A set of utilities for performing Phylogenetic Analysis by Maximum
Likelihood (PAML).

PR:		19753
Submitted by:	David A. Bader <dbader@cielo.eece.unm.edu>
2000-07-10 03:21:05 +00:00

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--- Makefile.orig Sun Mar 12 20:49:36 2000
+++ Makefile Fri Jul 7 06:32:33 2000
@@ -1,7 +1,7 @@
PRGS = baseml codeml codemlsites basemlg pamp evolver mcmctree yn00 chi2
CC = cc # cc, gcc, cl
-CFLAGS = -fast
+CFLAGS += -O3
#CFLAGS = -w0 -warnprotos -newc -std -fast
#CFLAGS = -g -w0 -warnprotos -newc -std -edit1 #