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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-24 00:45:52 +00:00
freebsd-ports/science
Tijl Coosemans 7f997ad80c - USES=fortran.
- Fix detection of dlopen(3) to support plugins from science/vmd.
2013-12-27 16:39:52 +00:00
..
2d-rewriter
2dhf Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
abinit science/abinit: depends explicitly on "python" 2013-12-15 12:49:28 +00:00
afni Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1; 2013-11-13 08:19:34 +00:00
avogadro - Update from 1.1.0 to 1.1.1 2013-12-18 23:33:20 +00:00
bddsolve Convert LIB_DEPENDS for ports depending on boost 2013-12-12 14:15:03 +00:00
bft
bodr - Update to version 10 2013-11-02 17:34:59 +00:00
brian Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
buddy Reset maintainer for llwang@infor.org 2013-12-18 10:38:33 +00:00
cdcl
cdf Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
cdo
cgnslib Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
checkmol
chemical-mime-data
chemtool
chemtool-devel science/chemtool-devel: Unbreak on FreeBSD 10+ 2013-12-25 22:08:13 +00:00
clhep
colt
crf++
dcl Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
devisor
dlpoly-classic Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
dtiquery
ecs Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
elmer-eio Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
elmer-hutiter Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
elmer-matc science/elmer(post,-matc): Use modern fortran, unbreak, undeprecate 2013-12-26 02:47:52 +00:00
elmer-meshgen2d
elmergrid
elmerpost science/elmer(post,-matc): Use modern fortran, unbreak, undeprecate 2013-12-26 02:47:52 +00:00
epte
euler
fastcap
fasthenry
felt
fisicalab
flounder Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
fvcom Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
fvcom-mpi
fvm Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
g3data
gamess uncomment MANUAL_PACKAGE_BUILD. 2013-11-29 01:45:50 +00:00
gchemutils Add patch to unbreak with libc++ 10.0+. 2013-12-03 22:10:25 +00:00
gdis
getdp Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
ghemical Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
ghmm
gnudatalanguage - Upgrade to 1.3.18. 2013-11-30 15:08:05 +00:00
gramps
gromacs - USES=fortran. 2013-12-27 16:39:52 +00:00
gsmc
gtamsanalyzer
gwyddion - Bump dependent ports' revisions (graphics/ilmbase and graphics/OpenEXR) 2013-11-20 14:25:28 +00:00
h5utils
harminv Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
hdf Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
hdf5
hdf5-18 - Fix PKGNAME collision 2013-12-11 18:38:53 +00:00
hdf-java - Convert to dos2unix.mk 2013-11-19 23:08:44 +00:00
hs-bio Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
InsightToolkit Now when it builds on 10.x, drop maintainership 2013-12-21 00:28:51 +00:00
isaac-cfd Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
jmol - Update to version 13.2.3 [1] 2013-11-07 16:53:33 +00:00
jstrack
kalzium - Update from 1.1.0 to 1.1.1 2013-12-18 23:33:20 +00:00
kst2 Add patches to fix build on 10 and head 2013-12-09 15:08:42 +00:00
lamprop
libctl Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
libghemical Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
libint
libkml - Update LICENSE 2013-12-26 21:48:54 +00:00
liblinear
liboglappth
libquantum
libsvm
libsvm-python
linsmith
massxpert
mbdyn Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
mcstas Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
medit
meep Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
mei - Upgrade to 1.0.4; 2013-11-26 21:30:22 +00:00
minc
minc2 Mark as broken: does not build with newer hdf5 version: 2013-12-06 11:44:48 +00:00
mol2ps
mpb Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
mpqc Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
mpqc-mpich
ncs science/ncs: fix 'python' usage to remove implicity dependency of lang/python 2013-12-17 21:55:48 +00:00
netcdf - Fix PKGNAME collision 2013-11-06 17:34:52 +00:00
netcdf3-ftn - Fix PKGNAME collision 2013-11-06 17:35:50 +00:00
netcdf4 - Use CONFLICTS_INSTALL instead of CONFLICTS 2013-12-10 19:17:08 +00:00
netcdf-ftn - Remove LATEST_LINK 2013-12-10 19:18:39 +00:00
nifticlib
openbabel Add upstream patch to fix the build with libc++. 2013-11-13 15:49:25 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS Support STAGEDIR. 2013-11-06 01:32:11 +00:00
p5-PerlMol
p5-Physics-Unit
paje
paraview Update freetype to 2.5.2. 2013-12-24 21:22:21 +00:00
peekabot Convert LIB_DEPENDS for ports depending on boost 2013-12-12 14:15:03 +00:00
pnetcdf Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
psi3 Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
psychopy Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
py-coards
py-DendroPy
py-h5py science/py-h5py: update to 2.2.1 2013-12-13 19:59:42 +00:00
py-hcluster Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
py-mdp Reset maintainer for llwang@infor.org 2013-12-18 10:38:33 +00:00
py-mlpy Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
py-netCDF4 - Convert to dos2unix.mk 2013-11-19 23:08:44 +00:00
py-obspy - Fix build with distribute -> setuptools change 2013-11-27 19:21:00 +00:00
py-paida
py-pupynere Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
py-pyaixi science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm 2013-12-08 14:12:47 +00:00
py-pydap science/py-pydap: update to 3.1.1 2013-11-29 11:40:24 +00:00
py-pydicom
py-scikit-learn Use PYDISTUTILS_AUTOPLIST. 2013-11-05 12:37:28 +00:00
py-scimath - Update WWW: 2013-11-20 20:51:25 +00:00
py-scipy - Fix distinfo 2013-11-18 15:36:42 +00:00
py-ws2300
pybrain Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
pycdf Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
pynn Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
pyteomics Update to 2.2.1 2013-11-29 11:57:18 +00:00
pyteomics.biolccc - Update WWW: 2013-11-20 20:51:25 +00:00
qcl - Update to version 0.6.3 2013-10-30 17:57:33 +00:00
qtresistors - Convert to USES=qmake (and other USES while I'm here) 2013-11-22 12:55:00 +00:00
R-cran-AMORE Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-bayesm Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-DCluster Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-e1071 Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-eco Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-Epi Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-epicalc Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-snow Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-som Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
ruby-dcl Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
ruby-gphys Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
ruby-netcdf Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
rubygem-ai4r - Add stage support 2013-10-30 02:56:33 +00:00
silo - Update from 4.9 to 4.9.1 2013-12-18 23:27:40 +00:00
simlib
step Add my upstream commit that fixes the build with libc++. 2013-11-03 22:48:12 +00:00
svmlight
szip
udunits
v_sim Update to libmpc version 1.0.1 which brings the following fixes: 2013-10-26 00:52:33 +00:00
veusz - Update to 1.19.1 2013-12-22 14:33:44 +00:00
vmd
voro++
x11iraf
xfce4-equake-plugin - Update MASTER_SITES macro, xfce4-equake-plugin is now hosted on 2013-10-31 17:11:01 +00:00
xmakemol
xmds
Makefile science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm 2013-12-08 14:12:47 +00:00