Koop Mast 5aa7246575 Switch from libglut to freeglut and retire libglut. Libglut hasn't been ... developed in years and has been dropped from the MESA 8.0 distribution. Freeglut is a rewrite of glut and is actively developed and is used by many linux distributions instead of libglut. Bump all ports that directly depend on libglut because of the shlib version change. There are some extra items in this patch. *) Because freeglut doesn't have the same dependancies as libglut, some ports need extra dependencies added to USE_XORG to make them build. *) Mark graphics/f90gl broken, f90gl depends on a header that is only shipped with libglut. *) Remove option for libglut/freeglut selection in games/cake, only freeglut remains now. *) While here fix a png related build issue games/vegastrike. Thanks to miwi for running the exp-run. Approved by: portmgr (miwi) Collaboration with: zeising@ Obtained from: xorg-dev staging area.		2012-08-04 22:52:02 +00:00
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adun	- reset MAINTAINER	2012-06-26 05:44:19 +00:00
ariadne
artemis
avida	- Update to version 2.12.3	2012-06-17 20:04:32 +00:00
babel
belvu
biococoa	- reset MAINTAINER	2012-06-26 05:44:19 +00:00
biojava	Fix typos in COMMENT	2012-07-29 11:17:02 +00:00
blast
blat
boinc-simap	- Adjust BOINC_* variables to be consistent with new system in boinc-client	2012-05-16 13:46:30 +00:00
chemeq
clustalw
consed
crux	Does not build on powerpc-9: error in pthreads.	2011-11-10 14:30:51 +00:00
dna-qc
dotter
embassy	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
emboss	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
fasta
fasta3
fastdnaml
finchtv
fluctuate
garlic	Fix typos in COMMENT	2012-07-25 06:32:06 +00:00
genpak	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
gff2ps	- Update MASTER_SITES and WWW: line	2012-02-19 23:24:52 +00:00
gmap
gperiodic	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
grappa
hmmer
iolib	- Remove WITH_FBSD10_FIX, is no longer needed	2011-11-09 15:26:04 +00:00
jalview
lagan
lamarc	- Update to version 2.1.8	2012-06-17 20:22:32 +00:00
libgenome
libsbml
linux-foldingathome
mafft
mapm3
migrate
molden	Switch from libglut to freeglut and retire libglut. Libglut hasn't been	2012-08-04 22:52:02 +00:00
mopac
mrbayes
mummer	- Update to 3.23	2012-01-17 00:51:39 +00:00
muscle	Fix typos in COMMENT	2012-07-24 07:19:21 +00:00
ncbi-toolkit
njplot	s/X11BASE/LOCALBASE/, or equivalent.	2012-06-24 21:53:38 +00:00
ortep3
p5-AcePerl	- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or	2012-06-10 18:42:48 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das	- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or	2012-06-10 18:42:48 +00:00
p5-Bio-Das-Lite
p5-Bio-GFF3	Fix typos in COMMENT	2012-07-25 06:32:06 +00:00
p5-Bio-Glite	At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450	2012-01-21 17:40:15 +00:00
p5-Bio-Graphics	- Update to 2.29	2012-06-18 09:30:35 +00:00
p5-Bio-MAGETAB	- Update to 1.23	2012-07-19 16:42:55 +00:00
p5-Bio-NEXUS	- Update to 0.78	2012-02-11 02:04:41 +00:00
p5-Bio-Phylo	- Update to 0.50	2012-06-12 18:55:28 +00:00
p5-Bio-SCF	At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450	2012-01-21 17:40:15 +00:00
p5-bioperl	- Remove SITE_PERL from *_DEPENDS	2012-06-30 05:23:19 +00:00
p5-bioperl-run	- Remove SITE_PERL from *_DEPENDS	2012-06-30 14:53:22 +00:00
paml
phd2fasta
phrap
phred
phylip
phyml
platon
povchem	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
primer3	- Respect CC	2012-01-27 17:41:00 +00:00
protomol	Switch from libglut to freeglut and retire libglut. Libglut hasn't been	2012-08-04 22:52:02 +00:00
psi88
py-biopython	- Update to 1.59	2012-03-06 06:40:50 +00:00
pycogent	- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or	2012-06-10 18:42:48 +00:00
pyfasta	- Update to 0.4.5	2012-02-23 13:43:25 +00:00
pymol	Switch from libglut to freeglut and retire libglut. Libglut hasn't been	2012-08-04 22:52:02 +00:00
python-nexus	- Update to 0.87	2011-12-23 08:05:00 +00:00
rasmol
recombine
ruby-bio
seaview	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
seqan	Replace USE_GCC=4.4+ by USE_GCC=4.6+ since GCC 4.4 is on its way out.	2012-07-21 22:20:32 +00:00
seqio
sim4
ssaha
t_coffee	- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or	2012-06-10 18:42:48 +00:00
tinker
treepuzzle
treeviewx	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
tRNAscan-SE
velvet
wise
xdrawchem	- update png to 1.5.10	2012-06-01 05:26:28 +00:00
xmolwt
Makefile	SeqAn is an open source C++ library of efficient algorithms	2012-06-06 17:51:33 +00:00